Structural basis for cargo binding and autoinhibition of Bicaudal-D1 by a parallel coiled-coil with homotypic registry

Biochemical and Biophysical Research Communications

Volumn 460, Issue 2, 2015, Pages 451-456

  Terawaki, Shin Ichi ^a,c   Yoshikane, Asuka ^a,c   Higuchi, Yoshiki ^b,c   Wakamatsu, Kaori ^a,c  

^a GUNMA UNIVERSITY   (Japan)

^b UNIVERSITY OF HYOGO   (Japan)

^c RIKEN ^*  (Japan)

Author keywords

Bicaudal D; Rab6; RanBP2; Retrograde transport

Indexed keywords

BICAUDAL-D1 PROTEIN, MOUSE; CYTOSKELETON PROTEIN; PROTEIN BINDING; SIGNAL TRANSDUCING ADAPTOR PROTEIN;

ANIMAL; CHEMISTRY; METABOLISM; MOUSE; PROTEIN CONFORMATION;

ADAPTOR PROTEINS, SIGNAL TRANSDUCING; ANIMALS; CYTOSKELETAL PROTEINS; MICE; PROTEIN BINDING; PROTEIN CONFORMATION;

EID: 84937764958     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2015.03.054     Document Type: Article

References (35)

1. J.R. Kardon, and R.D. Vale Regulators of the cytoplasmic dynein motor Nat. Rev. Mol. Cell Biol. 10 2009 854 865
2. K.T. Vaughan, and R.B. Vallee Cytoplasmic dynein binds dynactin through a direct interaction between the intermediate chains and p150Glued J. Cell Biol. 131 1995 1507 1516
3. S. Karki, and E.L. Holzbaur Affinity chromatography demonstrates a direct binding between cytoplasmic dynein and the dynactin complex J. Biol. Chem. 270 1995 28806 28811
4. A.W. Tai, J.Z. Chuang, C. Bode, U. Wolfrum, and C.H. Sung Rhodopsin's carboxy-terminal cytoplasmic tail acts as a membrane receptor for cytoplasmic dynein by binding to the dynein light chain Tctex-1 Cell 97 1999 877 887
5. A. Purohit, S.H. Tynan, R. Vallee, and S.J. Doxsey Direct interaction of pericentrin with cytoplasmic dynein light intermediate chain contributes to mitotic spindle organization J. Cell Biol. 147 1999 481 492
6. M. Farkasovsky, and H. Küntzel Cortical Num1p interacts with the dynein intermediate chain Pac11p and cytoplasmic microtubules in budding yeast J. Cell Biol. 152 2001 251 262
7. A.P. Carter, C. Cho, L. Jin, and R.D. Vale Crystal structure of the dynein motor domain Science 331 2011 1159 1165
8. T. Kon, T. Oyama, R. Shimo-Kon, K. Imamula, T. Shima, and K. Sutoh The 2.8 Å crystal structure of the dynein motor domain Science 484 2012 345 350
9. H. Schmidt, E.S. Gleave, and A.P. Carter The 2.8 Å crystal structure of the dynein motor domain Nat. Struct. Mol. Biol. 484 2012 345 350
10. H. Schmidt, R. Zalyte, L. Urnavicius, and A.P. Carter Structure of human cytoplasmic dynein-2 primed for its power stroke Nature 518 2014 435 438
11. J. Mohler, and E.F. Wieschaus Dominant maternal-effect mutations of Drosophila melanogaster causing the production of double-abdomen embryos Genetics 112 1986 803 822
12. R. Steward, and C. Nüsslein-Volhard The genetics of the dorsal-Bicaudal-D region of Drosophila melanogaster Genetics 113 1986 665 678
13. C.C. Hoogenraad, A. Akhmanova, S.A. Howell, B.R. Dortland, C.I. de Zeeuw, and R. Willemsen Mammalian Golgi-associated Bicaudal-D2 functions in the dynein-dynactin pathway by interacting with these complexes EMBO J. 20 2001 4041 4054
14. M. Baens, and P. Marynen A human homologue (BICD1) of the Drosophila bicaudal-D gene Genomics 45 1997 601 606
15. M.A. Schlager, H.T. Hoang, L. Urnavicius, S.L. Bullock, and A.P. Carter In vitro reconstitution of a highly processive recombinant human dynein complex EMBO J. 33 2014 1855 1868
16. R.J. McKenney, W. Huynh, M.E. Tanenbaum, G. Bhabha, and R.D. Vale Activation of cytoplasmic dynein motility by dynactin-cargo adapter complexes Science 345 2014 337 341
17. T. Matanis, A. Akhmanova, P. Wulf, E. Del Nery, T. Weide, and T. Stepanova Bicaudal-D regulates COPI-independent Golgi-ER transport by recruiting the dynein-dynactin motor complex Nat. Cell. Biol. 4 2002 986 992
18. B.F.J. Wanschers, R. van de Vorstenbosch, M.A. Schlager, D. Splinter, A. Akhmanova, and C.C. Hoogenraad A role for the Rab6B Bicaudal-D1 interaction in retrograde transport in neuronal cells Exp. Cell Res. 313 2007 3408 3420
19. D.L. Splinter, M.E. Tanenbaum, A. Lindqvist, D. Jaarsma, A. Flotho, and K. Lou Yu Bicaudal D2, dynein, and Kinesin-1 associate with nuclear pore complexes and regulate centrosome and nuclear positioning during mitotic entry Plos Biol. 313 2007 3408 3420
20. C.C. Hoogenraad, P. Wulf, N. Schiefermeier, T. Stepanova, N. Galjart, and J.V. Small Bicaudal D induces selective dynein-mediated microtubule minus end-directed transport EMBO J. 22 2003 6004 6015
21. D. Splinter, D.S. Razafsky, M.A. Schlager, A. Serra-Marques, I. Grigoriev, and J. Demmers Mammalian Golgi-associated Bicaudal-D2 functions in the dynein-dynactin pathway by interacting with these complexes Mol. Biol. Cell. 20 2001 4041 4054
22. J. Lipka, M. Kuijpers, J. Jaworski, and C.C. Hoogenraad Mutations in cytoplasmic dynein and its regulators cause malformations of cortical development and neurodegenerative diseases Biochem. Soc. Trans. 41 2013 1605 1612
23. E.C. Oates, A.M. Rossor, M. Hafezparast, M. Gonzalez, F. Speziani, and D.G. MacArthur Mutations in BICD2 cause dominant congenital spinal muscular atrophy and hereditary spastic paraplegia Am. J. Hum. Genet. 92 2013 965 973
24. K. Neveling, L.A. Martinez-Carrera, I. Hölker, A. Heister, A. Verrips, and S.M. Hosseini-Barkooie Mutations in BICD2, which encodes a golgin and important motor adaptor, cause congenital autosomal-dominant spinal muscular atrophy Am. J. Hum. Genet. 92 2013 946 954
25. K. Peeters, I. Litvinenko, B. Asselbergh, L. Almeida-Souza, T. Chamova, and T. Geuens Molecular defects in the motor adaptor BICD2 cause proximal spinal muscular atrophy with autosomal-dominant inheritance Am. J. Hum. Genet. 92 2013 955 964
26. D. Jaarsma, R. van den Berg, P.S. Wulf, S. van Erp, N. Keijzer, and M.A. Schlager A role for Bicaudal-D2 in radial cerebellar granule cell migration Nat. Commun. 5 2014 3411
27. Y. Liu, H.K. Salter, A.N. Holding, C.M. Johnson, E. Stephens, and P.J. Lukavsky Bicaudal-D uses a parallel, homodimeric coiled coil with heterotypic registry to coordinate recruitment of cargos to dynein Genes. Dev. 27 2013 1233 1246
28. S. Terawaki, H. Ootsuka, Y. Higuchi, and K. Wakamatsu Crystallographic characterization of the C-terminal coiled-coil region of mouse Bicaudal-D1 (BICD1) Acta Crystallogr. F. Struct. Biol. Commun. 70 2014 1103 1106
29. T.R. Schneider, and G.M. Sheldrick Substructure solution with SHELXD Acta Crystallogr. D. Biol. Crystallogr. 58 2002 1772 1779
30. G. Bricogne, C. Vonrhein, C. Flensburg, M. Schiltz, and W. Paciorek Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0 Acta Crystallogr. D. Biol. Crystallogr. 59 2003 2023 2030
31. J.P. Abrahams, and A.G.W. Leslie Methods used in the structure determination of bovine mitochondrial F1 ATPase Acta Crystallogr. D. Biol. Crystallogr. 52 1996 30 42
32. P. Emsley, and K. Cowtan Coot: model-building tools for molecular graphics Acta Crystallogr. D. Biol. Crystallogr. 60 2004 2126 2132
33. P.H. Zwart, P.V. Afonine, R.W. Grosse-Kunstleve, L.-W. Hung, T.R. Ioerger, and A.J. McCoy Automated structure solution with the PHENIX suite Methods Mol. Biol. 426 2008 419 435
34. A.N. Lupas, and M. Gruber The structure of alpha-helical coiled coils Adv. Protein Chem. 70 2005 37 78
35. J. Walshaw, and D.N. Woolfson Socket: a program for identifying and analysing coiled-coil motifs within protein structures J. Mol. Biol. 307 2001 1427 1450