-
1
-
-
0025183708
-
Basic local alignment search tool
-
PID: 2231712, COI: 1:CAS:528:DyaK3MXitVGmsA%3D%3D
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
33846258671
-
Bacterial characterization of the snow cover at Spitzberg, Svalbard
-
PID: 17328766, COI: 1:CAS:528:DC%2BD2sXhslGrsr0%3D
-
Amato P, Hennebelle R, Magand O, Sancelme M, Delort A-M, Barbante C, Boutron C, Ferrari C (2007) Bacterial characterization of the snow cover at Spitzberg, Svalbard. FEMS Microbiol Ecol 59:255–264
-
(2007)
FEMS Microbiol Ecol
, vol.59
, pp. 255-264
-
-
Amato, P.1
Hennebelle, R.2
Magand, O.3
Sancelme, M.4
Delort, A.-M.5
Barbante, C.6
Boutron, C.7
Ferrari, C.8
-
3
-
-
0015321954
-
Taxonomy of aerobic marine eubacteria
-
PID: 4552999, COI: 1:STN:280:DyaE387lvVyitQ%3D%3D
-
Baumann L, Baumann P, Mandel M, Allen RD (1972) Taxonomy of aerobic marine eubacteria. J Bacteriol 110:402–429
-
(1972)
J Bacteriol
, vol.110
, pp. 402-429
-
-
Baumann, L.1
Baumann, P.2
Mandel, M.3
Allen, R.D.4
-
4
-
-
67651245379
-
Characterization of airborne microbial communities at a high-elevation site and their potential to act as atmospheric ice nuclei
-
PID: 19502432, COI: 1:CAS:528:DC%2BD1MXhtVSgtrjK
-
Bowers RM, Lauber CL, Wiedinmyer C, Hamady M, Hallar AG, Fall R, Knight R, Fierer N (2009) Characterization of airborne microbial communities at a high-elevation site and their potential to act as atmospheric ice nuclei. Appl Environ Microbiol 75:5121–5130
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 5121-5130
-
-
Bowers, R.M.1
Lauber, C.L.2
Wiedinmyer, C.3
Hamady, M.4
Hallar, A.G.5
Fall, R.6
Knight, R.7
Fierer, N.8
-
5
-
-
84355162255
-
Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene
-
PID: 21716307, COI: 1:CAS:528:DC%2BC3MXhs1Gjs7rE
-
Bowman JS, Rasmussen S, Blom N, Deming JW, Rysgaard S, Sicheritz-Ponten T (2012) Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene. ISME J 6:11–20
-
(2012)
ISME J
, vol.6
, pp. 11-20
-
-
Bowman, J.S.1
Rasmussen, S.2
Blom, N.3
Deming, J.W.4
Rysgaard, S.5
Sicheritz-Ponten, T.6
-
6
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
PID: 20383131, COI: 1:CAS:528:DC%2BC3cXksFalurg%3D
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7:335–336
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Turnbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
7
-
-
0033781869
-
Bacterial activity in South Pole snow
-
PID: 11010907, COI: 1:CAS:528:DC%2BD3cXnt1Clsro%3D
-
Carpenter EJ, Lin S, Capone DG (2000) Bacterial activity in South Pole snow. Appl Environ Microbiol 66:4514–4517
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 4514-4517
-
-
Carpenter, E.J.1
Lin, S.2
Capone, D.G.3
-
8
-
-
0001463548
-
Nonparametric estimation of the number of classes in a population
-
Chao A (1984) Nonparametric estimation of the number of classes in a population. Scand J Stat 11:265–270
-
(1984)
Scand J Stat
, vol.11
, pp. 265-270
-
-
Chao, A.1
-
9
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
PID: 16820507, COI: 1:CAS:528:DC%2BD28XnsVaqtLg%3D
-
DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, Keller K, Huber T, Dalevi D, Hu P, Andersen GL (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72:5069–5072
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
10
-
-
79961181125
-
UCHIME improves sensitivity and speed of chimera detection
-
PID: 21700674, COI: 1:CAS:528:DC%2BC3MXhtVSiurvL
-
Edgar RC, Haas BJ, Clemente JC, Quince C, Knight R (2011) UCHIME improves sensitivity and speed of chimera detection. Bioinformatics 27:2194–2200
-
(2011)
Bioinformatics
, vol.27
, pp. 2194-2200
-
-
Edgar, R.C.1
Haas, B.J.2
Clemente, J.C.3
Quince, C.4
Knight, R.5
-
11
-
-
84896853008
-
Sea ice microorganisms: environmental constraints and extracellular responses
-
PID: 24832800
-
Ewert M, Deming JW (2013) Sea ice microorganisms: environmental constraints and extracellular responses. Biology 2:603–628
-
(2013)
Biology
, vol.2
, pp. 603-628
-
-
Ewert, M.1
Deming, J.W.2
-
12
-
-
0026688315
-
Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium
-
PID: 1382536, COI: 1:STN:280:DyaK3s%2Fgt1eisA%3D%3D
-
Gauthier MJ, Lafay B, Christen R, Fernandez L, Acquaviva M, Bonin P, Bertrand J-C (1992) Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium. Int J Syst Bacteriol 42:568–576
-
(1992)
Int J Syst Bacteriol
, vol.42
, pp. 568-576
-
-
Gauthier, M.J.1
Lafay, B.2
Christen, R.3
Fernandez, L.4
Acquaviva, M.5
Bonin, P.6
Bertrand, J.-C.7
-
13
-
-
84866386969
-
Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse
-
PID: 22572803, COI: 1:CAS:528:DC%2BC38XhtVWjt7%2FJ
-
Hansen CHF, Krych L, Nielsen DS, Vogensen FK, Hansen LH, Sørensen SJ, Buschard K, Hansen AK (2012) Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse. Diabetologia 55:2285–2294
-
(2012)
Diabetologia
, vol.55
, pp. 2285-2294
-
-
Hansen, C.H.F.1
Krych, L.2
Nielsen, D.S.3
Vogensen, F.K.4
Hansen, L.H.5
Sørensen, S.J.6
Buschard, K.7
Hansen, A.K.8
-
14
-
-
79958225959
-
Microbes in High Arctic snow and implications for the cold biosphere
-
PID: 21460114, COI: 1:CAS:528:DC%2BC3MXns1SltrY%3D
-
Harding T, Jungblut AD, Lovejoy C, Vincent WF (2011) Microbes in High Arctic snow and implications for the cold biosphere. Appl Environ Microbiol 77:3234–3243
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 3234-3243
-
-
Harding, T.1
Jungblut, A.D.2
Lovejoy, C.3
Vincent, W.F.4
-
15
-
-
34848889237
-
Ecology and biotechnology of the genus Shewanella
-
PID: 18035608, COI: 1:CAS:528:DC%2BD2sXhtlartrfI
-
Hau HH, Gralnick JA (2007) Ecology and biotechnology of the genus Shewanella. Annu Rev Microbiol 61:237–258
-
(2007)
Annu Rev Microbiol
, vol.61
, pp. 237-258
-
-
Hau, H.H.1
Gralnick, J.A.2
-
16
-
-
84883199674
-
The dynamic bacterial communities of a melting High Arctic glacier snowpack
-
PID: 23552623, COI: 1:CAS:528:DC%2BC3sXhtlSisLzJ
-
Hell K, Edwards A, Zarsky J, Podmirseg SM, Girdwood S, Pachebat JA, Insam H, Sattler B (2013) The dynamic bacterial communities of a melting High Arctic glacier snowpack. ISME J 7:1814–1826
-
(2013)
ISME J
, vol.7
, pp. 1814-1826
-
-
Hell, K.1
Edwards, A.2
Zarsky, J.3
Podmirseg, S.M.4
Girdwood, S.5
Pachebat, J.A.6
Insam, H.7
Sattler, B.8
-
17
-
-
0035487318
-
Counting the uncountable: statistical approaches to estimating microbial diversity
-
PID: 11571135, COI: 1:CAS:528:DC%2BD3MXns1Wisro%3D
-
Hughes JB, Hellmann JJ, Ricketts TH, Bohannan BJM (2001) Counting the uncountable: statistical approaches to estimating microbial diversity. Appl Environ Microbiol 67:4399–4406
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4399-4406
-
-
Hughes, J.B.1
Hellmann, J.J.2
Ricketts, T.H.3
Bohannan, B.J.M.4
-
18
-
-
0034033434
-
Idiomarina gen. nov., comprising novel indigenous deep-sea bacteria from the Pacific Ocean, including descriptions of two species, Idiomarina abyssalis sp. nov. and Idiomarina zobellii sp. nov
-
PID: 10758902, COI: 1:CAS:528:DC%2BD3cXivFaisb0%3D
-
Ivanova EP, Romanenko LA, Chun J, Matte MH, Matte GR, Mikhailov VV, Svetashev VI, Huq A, Maugel T, Colwell RR (2000) Idiomarina gen. nov., comprising novel indigenous deep-sea bacteria from the Pacific Ocean, including descriptions of two species, Idiomarina abyssalis sp. nov. and Idiomarina zobellii sp. nov. Int J Syst Evol Microbiol 50:901–907
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 901-907
-
-
Ivanova, E.P.1
Romanenko, L.A.2
Chun, J.3
Matte, M.H.4
Matte, G.R.5
Mikhailov, V.V.6
Svetashev, V.I.7
Huq, A.8
Maugel, T.9
Colwell, R.R.10
-
19
-
-
77951765839
-
Microbial sequences retrieved from environmental samples from seasonal arctic snow and meltwater from Svalbard, Norway
-
PID: 20066448
-
Larose C, Berger S, Ferrari C, Navarro E, Dommergue A, Schneider D, Vogel TM (2010) Microbial sequences retrieved from environmental samples from seasonal arctic snow and meltwater from Svalbard, Norway. Extremophiles 14:205–212
-
(2010)
Extremophiles
, vol.14
, pp. 205-212
-
-
Larose, C.1
Berger, S.2
Ferrari, C.3
Navarro, E.4
Dommergue, A.5
Schneider, D.6
Vogel, T.M.7
-
20
-
-
84883178385
-
The dynamic arctic snow pack: an unexplored environment for microbial diversity and activity
-
PID: 24832663
-
Larose C, Dommergue A, Vogel TM (2013) The dynamic arctic snow pack: an unexplored environment for microbial diversity and activity. Biology 2:317–330
-
(2013)
Biology
, vol.2
, pp. 317-330
-
-
Larose, C.1
Dommergue, A.2
Vogel, T.M.3
-
21
-
-
67349266235
-
Bacterial diversity in the snow over Tibetan Plateau glaciers
-
PID: 19159068, COI: 1:CAS:528:DC%2BD1MXls1Slurw%3D
-
Liu Y, Yao T, Jiao N, Kang S, Xu B, Zeng Y, Huang S, Liu X (2009) Bacterial diversity in the snow over Tibetan Plateau glaciers. Extremophiles 13:411–423
-
(2009)
Extremophiles
, vol.13
, pp. 411-423
-
-
Liu, Y.1
Yao, T.2
Jiao, N.3
Kang, S.4
Xu, B.5
Zeng, Y.6
Huang, S.7
Liu, X.8
-
22
-
-
84885304716
-
Activity and bacterial diversity of snow around Russian Antarctic stations
-
PID: 24012540
-
Lopatina A, Krylenkov V, Severinov K (2013) Activity and bacterial diversity of snow around Russian Antarctic stations. Res Microbiol 164:949–958
-
(2013)
Res Microbiol
, vol.164
, pp. 949-958
-
-
Lopatina, A.1
Krylenkov, V.2
Severinov, K.3
-
24
-
-
84891488887
-
Bacterial community structure in High-Arctic snow and freshwater as revealed by pyrosequencing of 16S rRNA genes and cultivation
-
Møller AK, Søborg DA, Al-Soud WA, Sørensen SJ, Kroer N (2013) Bacterial community structure in High-Arctic snow and freshwater as revealed by pyrosequencing of 16S rRNA genes and cultivation. Polar Res 32:17390
-
(2013)
Polar Res
, vol.32
, pp. 17390
-
-
Møller, A.K.1
Søborg, D.A.2
Al-Soud, W.A.3
Sørensen, S.J.4
Kroer, N.5
-
25
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
PID: 7683183, COI: 1:CAS:528:DyaK3sXit1Kktrk%3D
-
Muyzer G, de Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695–700
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
de Waal, E.C.2
Uitterlinden, A.G.3
-
27
-
-
0014945264
-
A multiple origin for plastids mitochondria
-
PID: 4988062, COI: 1:STN:280:DyaE3c3jslOktA%3D%3D
-
Raven PH (1970) A multiple origin for plastids mitochondria. Science 169:641–646
-
(1970)
Science
, vol.169
, pp. 641-646
-
-
Raven, P.H.1
-
28
-
-
77956304094
-
Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions
-
PID: 20805793, COI: 1:CAS:528:DC%2BC3cXhtV2hsbbI
-
Reeder J, Knight R (2010) Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions. Nat Methods 7:668–669
-
(2010)
Nat Methods
, vol.7
, pp. 668-669
-
-
Reeder, J.1
Knight, R.2
-
30
-
-
67449126557
-
A sea ice-free summer Arctic within 30 years?
-
Wang M, Overland JE (2009) A sea ice-free summer Arctic within 30 years? Geophys Res Lett 36:L07502
-
(2009)
Geophys Res Lett
, vol.36
, pp. L07502
-
-
Wang, M.1
Overland, J.E.2
-
31
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
PID: 17586664, COI: 1:CAS:528:DC%2BD2sXpsleqtrc%3D
-
Wang Q, Garrity GM, Tiedje JM, Cole JR (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73:5261–5267
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
|