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Volumn 32, Issue SUPPL., 2013, Pages

Bacterial community structure in high-arctic snow and freshwater as revealed by pyrosequencing of 16S rRNA genes and cultivation

Author keywords

Bacterial density; Doc; Microbial assemblages; Taxonomic diversity

Indexed keywords

BACTERIUM; CHLOROPLAST; COMMUNITY STRUCTURE; GENE; LAKE ECOSYSTEM; MICROBIAL COMMUNITY; PHYLOGENETICS; PHYSICOCHEMICAL PROPERTY; RELATIVE ABUNDANCE; RNA; SEA ICE; SNOW; TAXONOMY; CULTIVATION; CYANOBACTERIUM; FRESHWATER;

EID: 84891488887     PISSN: 08000395     EISSN: 17518369     Source Type: Journal    
DOI: 10.3402/polar.v32i0.17390     Document Type: Review
Times cited : (70)

References (37)
  • 2
    • 0036743902 scopus 로고    scopus 로고
    • The contribution of bacterial and fungal spores to the organic carbon content of cloud water, precipitation and aerosols
    • Bauer H., Kasper-Giebl A., Loflund M., Giebl H., Hitzenberger R., Zibuschka F. & Puxbaum H. 2002. The contribution of bacterial and fungal spores to the organic carbon content of cloud water, precipitation and aerosols. Atmospheric Research 64, 109-119
    • (2002) Atmospheric Research , vol.64 , pp. 109-119
    • Bauer, H.1    Kasper-Giebl, A.2    Loflund, M.3    Giebl, H.4    Hitzenberger, R.5    Zibuschka, F.6    Puxbaum, H.7
  • 3
    • 84355162255 scopus 로고    scopus 로고
    • Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene
    • Bowman J.S., Rasmussen S., Blom N., Deming J.W., Rysgaard S. & Sicheritz-Ponten T. 2012. Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene. ISME Journal 6, 11-20
    • (2012) ISME Journal , vol.6 , pp. 11-20
    • Bowman, J.S.1    Rasmussen, S.2    Blom, N.3    Deming, J.W.4    Rysgaard, S.5    Sicheritz-Ponten, T.6
  • 8
    • 34547617665 scopus 로고    scopus 로고
    • Biogeography of bacterioplankton in lakes and streams of an Arctic tundra catchment
    • Crump B.C., Adams H.E., Hobbie J.E. & Kling G.W. 2007. Biogeography of bacterioplankton in lakes and streams of an Arctic tundra catchment. Ecology 88, 1365-1378
    • (2007) Ecology , vol.88 , pp. 1365-1378
    • Crump, B.C.1    Adams, H.E.2    Hobbie, J.E.3    Kling, G.W.4
  • 9
    • 0030301476 scopus 로고    scopus 로고
    • Microbial diversity and function in Antarctic freshwater ecosystems
    • Ellis-Evans J.C. 1996. Microbial diversity and function in Antarctic freshwater ecosystems. Biodiversity and Conservation 5, 1395-1431
    • (1996) Biodiversity and Conservation , vol.5 , pp. 1395-1431
    • Ellis-Evans, J.C.1
  • 10
    • 33947389253 scopus 로고    scopus 로고
    • Diagnostic real-time PCR assays for the detection of emetic Bacillus cereus strains in foods and recent food-borne outbreaks
    • Fricker M., Messelhausser U., Busch U., Scherer S. & Ehling-Schulz M. 2007. Diagnostic real-time PCR assays for the detection of emetic Bacillus cereus strains in foods and recent food-borne outbreaks. Applied and Environmental Microbiology 73, 1892-1898
    • (2007) Applied and Environmental Microbiology , vol.73 , pp. 1892-1898
    • Fricker, M.1    Messelhausser, U.2    Busch, U.3    Scherer, S.4    Ehling-Schulz, M.5
  • 12
    • 11144237840 scopus 로고    scopus 로고
    • Diversity and cold-active hydrolytic enzymes of culturable bacteria associated with Arctic sea ice Spitsbergen
    • Groudieva T., Kambourova M., Yusuf H., Royter M., Grote R., Trinks H. & Antranikian G. 2004. Diversity and cold-active hydrolytic enzymes of culturable bacteria associated with Arctic sea ice, Spitsbergen. Extremophiles 8, 475-488
    • (2004) Extremophiles , vol.8 , pp. 475-488
    • Groudieva, T.1    Kambourova, M.2    Yusuf, H.3    Royter, M.4    Grote, R.5    Trinks, H.6    Antranikian, G.7
  • 14
    • 0033208454 scopus 로고    scopus 로고
    • The ecology of snow-covered systems: a brief overview of nutrient cycling and life in the cold
    • Jones H.G. 1999. The ecology of snow-covered systems: a brief overview of nutrient cycling and life in the cold. Hydrological Processes 13, 2135-2147
    • (1999) Hydrological Processes , vol.13 , pp. 2135-2147
    • Jones, H.G.1
  • 17
    • 77953594953 scopus 로고    scopus 로고
    • The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes
    • Kirchman D.L., Cottrell M.T. & Lovejoy C. 2010. The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes. Environmental Microbiology 12, 1132-1143
    • (2010) Environmental Microbiology , vol.12 , pp. 1132-1143
    • Kirchman, D.L.1    Cottrell, M.T.2    Lovejoy, C.3
  • 18
    • 0027800681 scopus 로고
    • Bacterial growth efficiency on natural dissolved organic matter
    • Kroer N. 1993. Bacterial growth efficiency on natural dissolved organic matter. Limnology and Oceanography 38, 1282-1290
    • (1993) Limnology and Oceanography , vol.38 , pp. 1282-1290
    • Kroer, N.1
  • 19
    • 0036888989 scopus 로고    scopus 로고
    • Lowtemperature-induced changes in composition and fluidity of lipopolysaccharides in the Antarctic psychrotrophic bacterium Pseudomonas syringae
    • Kumar G.S., Jagannadham M.V. & Ray M.K. 2002. Lowtemperature-induced changes in composition and fluidity of lipopolysaccharides in the Antarctic psychrotrophic bacterium Pseudomonas syringae. Journal of Bacteriology 184, 6746-6749
    • (2002) Journal of Bacteriology , vol.184 , pp. 6746-6749
    • Kumar, G.S.1    Jagannadham, M.V.2    Ray, M.K.3
  • 20
    • 77951765839 scopus 로고    scopus 로고
    • Microbial sequences retrieved from environmental samples from seasonal Arctic snow and meltwater from Svalbard Norway
    • Larose C., Berger S., Ferrari C., Navarro E., Dommergue A., Schneider D. & Vogel T.M. 2010. Microbial sequences retrieved from environmental samples from seasonal Arctic snow and meltwater from Svalbard, Norway. Extremophiles 14, 205-212
    • (2010) Extremophiles , vol.14 , pp. 205-212
    • Larose, C.1    Berger, S.2    Ferrari, C.3    Navarro, E.4    Dommergue, A.5    Schneider, D.6    Vogel, T.M.7
  • 21
    • 20544470984 scopus 로고    scopus 로고
    • Antarctic surface and subsurface snow and ice melt fluxes
    • Liston G.E. & Winther J.-G. 2005. Antarctic surface and subsurface snow and ice melt fluxes. Journal of Climate 18, 1469-1481
    • (2005) Journal of Climate , vol.18 , pp. 1469-1481
    • Liston, G.E.1    Winther, J.-G.2
  • 23
    • 34548297783 scopus 로고    scopus 로고
    • Diversity, abundance, and biomass production of bacterial groups in the western Arctic Ocean
    • Malmstrom R.R., Straza T.R.A., Cottrell M.T. & Kirchman D.L. 2007. Diversity, abundance, and biomass production of bacterial groups in the western Arctic Ocean. Aquatic Microbial Ecology 47, 45-55
    • (2007) Aquatic Microbial Ecology , vol.47 , pp. 45-55
    • Malmstrom, R.R.1    Straza, T.R.A.2    Cottrell, M.T.3    Kirchman, D.L.4
  • 24
    • 78751695148 scopus 로고    scopus 로고
    • Diversity and characterization of mercuryresistant bacteria in snow, freshwater and sea-ice brine from the High Arctic
    • Møller A.K., Barkay T., Al-Soud W.A., Sørensen S.J., Skov H. & Kroer N. 2011. Diversity and characterization of mercuryresistant bacteria in snow, freshwater and sea-ice brine from the High Arctic. FEMS Microbiology Ecology 75, 390-401
    • (2011) FEMS Microbiology Ecology , vol.75 , pp. 390-401
    • Møller, A.K.1    Barkay, T.2    Al-Soud, W.A.3    Sørensen, S.J.4    Skov, H.5    Kroer, N.6
  • 25
    • 33846203704 scopus 로고    scopus 로고
    • Growth kinetics of microorganisms isolated from Alaskan soil and permafrost in solid media frozen down to -358C
    • Panikov N. & Sizova M.V. 2006. Growth kinetics of microorganisms isolated from Alaskan soil and permafrost in solid media frozen down to -358C. FEMS Microbiology Ecolology 59, 500-512
    • (2006) FEMS Microbiology Ecolology , vol.59 , pp. 500-512
    • Panikov, N.1    Sizova, M.V.2
  • 26
    • 0038542819 scopus 로고    scopus 로고
    • Bacterioplanktion community diversity in a maritime Antarctic lake, determined by culture-dependent and culture-independent techniques
    • Pearce D.A., van der Gast C.J., Lawley B. & Ellis-Evans J.C. 2003. Bacterioplanktion community diversity in a maritime Antarctic lake, determined by culture-dependent and culture-independent techniques. FEMS Microbiology Ecology 45, 59-70
    • (2003) FEMS Microbiology Ecology , vol.45 , pp. 59-70
    • Pearce, D.A.1    van der Gast, C.J.2    Lawley, B.3    Ellis-Evans, J.C.4
  • 27
    • 0348181691 scopus 로고    scopus 로고
    • Earth's icy biosphere
    • A.T. Bull. (ed.) Washington, DC: American Society for Microbiology
    • Priscu J.C. & Christner B.C. 2004. Earth's icy biosphere. In A.T. Bull. (ed.): Microbial diversity and bioprospecting. Pp. 130-145. Washington, DC: American Society for Microbiology
    • (2004) Microbial diversity and bioprospecting , pp. 130-145
    • Priscu, J.C.1    Christner, B.C.2
  • 29
    • 79952620052 scopus 로고    scopus 로고
    • A solid-phase chemical actinometer film for measurement of solar UV penetration into snowpack
    • Rowland G.A. & Grannas A.M. 2011. A solid-phase chemical actinometer film for measurement of solar UV penetration into snowpack. Cold Regions Science and Technology 66, 75-83
    • (2011) Cold Regions Science and Technology , vol.66 , pp. 75-83
    • Rowland, G.A.1    Grannas, A.M.2
  • 32
    • 0028994541 scopus 로고
    • Sierra Nevada, California, U.S.A., snow algae: snow albedo changes, algal-bacterial interrelationships, and ultraviolet radiation effects
    • Thomas W.H. & Duval B. 1995. Sierra Nevada, California, U.S.A., snow algae: snow albedo changes, algal-bacterial interrelationships, and ultraviolet radiation effects. Arctic and Alpine Research 27, 389-399
    • (1995) Arctic and Alpine Research , vol.27 , pp. 389-399
    • Thomas, W.H.1    Duval, B.2
  • 33
    • 58549102694 scopus 로고    scopus 로고
    • Bacterial, archaeal and eukaryotic diversity in Arctic sediment as revealed by 16S rRNA and 18S rRNA gene clone libraries analysis
    • Tian F., Yu Y., Chen B., Li H., Yao Y.-F. & Guo X.-K. 2009. Bacterial, archaeal and eukaryotic diversity in Arctic sediment as revealed by 16S rRNA and 18S rRNA gene clone libraries analysis. Polar Biology 32, 93-103
    • (2009) Polar Biology , vol.32 , pp. 93-103
    • Tian, F.1    Yu, Y.2    Chen, B.3    Li, H.4    Yao, Y.-F.5    Guo, X.-K.6
  • 34
    • 77955929948 scopus 로고    scopus 로고
    • The functional potential of High Arctic permafrost revealed by metagenomic sequencing, qPCR and microarray analyses
    • Yergeau E., Hogues H., Whyte L.G. & Greer C.W. 2010. The functional potential of High Arctic permafrost revealed by metagenomic sequencing, qPCR and microarray analyses. ISME Journal 4, 1206-1214
    • (2010) ISME Journal , vol.4 , pp. 1206-1214
    • Yergeau, E.1    Hogues, H.2    Whyte, L.G.3    Greer, C.W.4
  • 35
    • 16344363305 scopus 로고    scopus 로고
    • Group-specific primer and probe sets to detect methanogenic communities using quantitative real-time polymerase chain reaction
    • Yu Y., Lee C., Kim J. & Hwang S. 2005. Group-specific primer and probe sets to detect methanogenic communities using quantitative real-time polymerase chain reaction. Biotechnology and Bioengineering 89, 670-679
    • (2005) Biotechnology and Bioengineering , vol.89 , pp. 670-679
    • Yu, Y.1    Lee, C.2    Kim, J.3    Hwang, S.4
  • 36
    • 70350643596 scopus 로고    scopus 로고
    • Psychrilyobacter atlanticus gen. nov., sp nov., a marine member of the phylum Fusobacteria that produces H(2) and degrades nitramine explosives under low temperature conditions
    • Zhao J.S., Manno D. & Hawari J. 2009. Psychrilyobacter atlanticus gen. nov., sp nov., a marine member of the phylum Fusobacteria that produces H(2) and degrades nitramine explosives under low temperature conditions. International Journal of Systematic and Evolutionary Microbiology 59, 491-497
    • (2009) International Journal of Systematic and Evolutionary Microbiology , vol.59 , pp. 491-497
    • Zhao, J.S.1    Manno, D.2    Hawari, J.3
  • 37
    • 0037178021 scopus 로고    scopus 로고
    • Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers
    • Zwart G., Crump B.C., Agterveld M.P.K.V., Hagen F. & Han S.K. 2002. Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers. Aquatic Microbial Ecology 28, 141-155
    • (2002) Aquatic Microbial Ecology , vol.28 , pp. 141-155
    • Zwart, G.1    Crump, B.C.2    Agterveld, M.P.K.V.3    Hagen, F.4    Han, S.K.5


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