메뉴 건너뛰기




Volumn 5, Issue , 2015, Pages

Nonfunctional ingestion of plant miRNAs in silkworm revealed by digital droplet PCR and transcriptome analysis

Author keywords

[No Author keywords available]

Indexed keywords

MICRORNA; PLANT RNA;

EID: 84937510343     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep12290     Document Type: Article
Times cited : (28)

References (45)
  • 1
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism, and function
    • Bartel, D. P. MicroRNAs: genomics, biogenesis, mechanism, and function. cell 116, 281-297 (2004).
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 2
    • 80051932344 scopus 로고    scopus 로고
    • MicroRNAs as regulators of root development and architecture
    • Khan, G. A. et al. MicroRNAs as regulators of root development and architecture. Plant Mol Biol 77, 47-58 (2011).
    • (2011) Plant Mol Biol , vol.77 , pp. 47-58
    • Khan, G.A.1
  • 3
    • 76649099558 scopus 로고    scopus 로고
    • The many roles of small RNAs in leaf development
    • Kidner, C. A. The many roles of small RNAs in leaf development. J Genet Genomics 37, 13-21 (2010).
    • (2010) J Genet Genomics , vol.37 , pp. 13-21
    • Kidner, C.A.1
  • 4
    • 84879887979 scopus 로고    scopus 로고
    • Evolutionary conservation of microRNA regulatory programs in plant flower development
    • Luo, Y., Guo, Z. & Li, L. Evolutionary conservation of microRNA regulatory programs in plant flower development. Dev Biol 380, 133-144 (2013).
    • (2013) Dev Biol , vol.380 , pp. 133-144
    • Luo, Y.1    Guo, Z.2    Li, L.3
  • 5
    • 84902387123 scopus 로고    scopus 로고
    • Essential functions of microRNAs in animal reproductive organs
    • Ryazansky, S., Mikhaleva, E. & Olenkina, O. Essential functions of microRNAs in animal reproductive organs. Mol Biol 48, 319-331 (2014).
    • (2014) Mol Biol , vol.48 , pp. 319-331
    • Ryazansky, S.1    Mikhaleva, E.2    Olenkina, O.3
  • 6
    • 84864378282 scopus 로고    scopus 로고
    • The roles of miRNAs in wing imaginal disc development in Drosophila
    • Waldron, J. & Newbury, S. The roles of miRNAs in wing imaginal disc development in Drosophila. Biochem Soc T 40, 891 (2012).
    • (2012) Biochem Soc T , vol.40 , pp. 891
    • Waldron, J.1    Newbury, S.2
  • 7
    • 40449127919 scopus 로고    scopus 로고
    • Detection and characterization of placental microRNAs in maternal plasma
    • Chim, S. S. et al. Detection and characterization of placental microRNAs in maternal plasma. Clin Chem 54, 482-490 (2008).
    • (2008) Clin Chem , vol.54 , pp. 482-490
    • Chim, S.S.1
  • 8
    • 48749122914 scopus 로고    scopus 로고
    • Circulating microRNAs as stable blood-based markers for cancer detection
    • Mitchell, P. S. et al. Circulating microRNAs as stable blood-based markers for cancer detection. P Natl Acad Sci USA 105, 10513-10518 (2008).
    • (2008) P Natl Acad Sci USA , vol.105 , pp. 10513-10518
    • Mitchell, P.S.1
  • 9
    • 79953301730 scopus 로고    scopus 로고
    • MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins
    • Vickers, K. C., Palmisano, B. T., Shoucri, B. M., Shamburek, R. D. & Remaley, A. T. MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins. Nat Cell Biol 13, 423-433 (2011).
    • (2011) Nat Cell Biol , vol.13 , pp. 423-433
    • Vickers, K.C.1    Palmisano, B.T.2    Shoucri, B.M.3    Shamburek, R.D.4    Remaley, A.T.5
  • 10
    • 84919916427 scopus 로고    scopus 로고
    • Cell-free microRNAs as cancer biomarkers: The odyssey of miRNAs through body fluids
    • Javidi, M. A. et al. Cell-free microRNAs as cancer biomarkers: the odyssey of miRNAs through body fluids. Med Oncol 31, 1-11 (2014).
    • (2014) Med Oncol , vol.31 , pp. 1-11
    • Javidi, M.A.1
  • 11
    • 77954257796 scopus 로고    scopus 로고
    • Secreted monocytic miR-150 enhances targeted endothelial cell migration
    • Zhang, Y. et al. Secreted monocytic miR-150 enhances targeted endothelial cell migration. Mol Cell 39, 133-144 (2010).
    • (2010) Mol Cell , vol.39 , pp. 133-144
    • Zhang, Y.1
  • 12
    • 84855502918 scopus 로고    scopus 로고
    • Exogenous plant MIR168a specifically targets mammalian LDLRAP1: Evidence of cross-kingdom regulation by microRNA
    • Zhang, L. et al. Exogenous plant MIR168a specifically targets mammalian LDLRAP1: evidence of cross-kingdom regulation by microRNA. Cell Res 22, 107-126 (2011).
    • (2011) Cell Res , vol.22 , pp. 107-126
    • Zhang, L.1
  • 13
    • 84887497048 scopus 로고    scopus 로고
    • Lack of detectable oral bioavailability of plant microRNAs after feeding in mice
    • Dickinson, B. et al. Lack of detectable oral bioavailability of plant microRNAs after feeding in mice. Nat Biotechnol 31, 965-967 (2013).
    • (2013) Nat Biotechnol , vol.31 , pp. 965-967
    • Dickinson, B.1
  • 14
    • 84858072048 scopus 로고    scopus 로고
    • New foods for thought
    • Hirschi, K. D. New foods for thought. Trends Plant Sci 17, 123-125 (2012).
    • (2012) Trends Plant Sci , vol.17 , pp. 123-125
    • Hirschi, K.D.1
  • 15
    • 84880854859 scopus 로고    scopus 로고
    • Real-time quantitative PCR and droplet digital PCR for plant miRNAs in mammalian blood provide little evidence for general uptake of dietary miRNAs: Limited evidence for general uptake of dietary plant xenomiRs
    • Witwer, K. W., McAlexander, M. A., Queen, S. E. & Adams, R. J. Real-time quantitative PCR and droplet digital PCR for plant miRNAs in mammalian blood provide little evidence for general uptake of dietary miRNAs: limited evidence for general uptake of dietary plant xenomiRs. RNA Biol 10, 1080-1086 (2013).
    • (2013) RNA Biol , vol.10 , pp. 1080-1086
    • Witwer, K.W.1    McAlexander, M.A.2    Queen, S.E.3    Adams, R.J.4
  • 16
    • 84864538586 scopus 로고    scopus 로고
    • Analysis of plant-derived miRNAs in animal small RNA datasets
    • Zhang, Y. et al. Analysis of plant-derived miRNAs in animal small RNA datasets. BMC Genomics 13, 381 (2012).
    • (2012) BMC Genomics , vol.13 , pp. 381
    • Zhang, Y.1
  • 17
    • 84884875985 scopus 로고    scopus 로고
    • Draft genome sequence of the mulberry tree Morus notabilis
    • He, N. et al. Draft genome sequence of the mulberry tree Morus notabilis. Nat Commun 4 (2013).
    • (2013) Nat Commun , vol.4
    • He, N.1
  • 18
    • 84905901531 scopus 로고    scopus 로고
    • Identification of the Conserved and Novel miRNAs in Mulberry by High-Throughput Sequencing
    • Jia, L. et al. Identification of the Conserved and Novel miRNAs in Mulberry by High-Throughput Sequencing. PloS One 9, e104409 (2014).
    • (2014) PloS One , vol.9
    • Jia, L.1
  • 19
    • 70350227275 scopus 로고    scopus 로고
    • Small RNAs and their roles in plant development
    • Chen, X. Small RNAs and their roles in plant development. Annu Rev Cell Dev Bi 25, 21-44 (2009).
    • (2009) Annu Rev Cell Dev Bi , vol.25 , pp. 21-44
    • Chen, X.1
  • 20
    • 84920274272 scopus 로고    scopus 로고
    • Honeysuckle-encoded atypical microRNA2911 directly targets influenza A viruses
    • Zhou, Z. et al. Honeysuckle-encoded atypical microRNA2911 directly targets influenza A viruses. Cell Res 25, 39-49 (2014).
    • (2014) Cell Res , vol.25 , pp. 39-49
    • Zhou, Z.1
  • 21
    • 84864448111 scopus 로고    scopus 로고
    • High-throughput assessment of microRNA activity and function using microRNA sensor and decoy libraries
    • Mullokandov, G. et al. High-throughput assessment of microRNA activity and function using microRNA sensor and decoy libraries. Nat Methods 9, 840-846 (2012).
    • (2012) Nat Methods , vol.9 , pp. 840-846
    • Mullokandov, G.1
  • 22
    • 67650711615 scopus 로고    scopus 로고
    • SOAP2: An improved ultrafast tool for short read alignment
    • Li, R. et al. SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics 25, 1966-1967 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1966-1967
    • Li, R.1
  • 24
    • 74449092611 scopus 로고    scopus 로고
    • Molecular characterization of heat shock protein 90, 70 and 70 cognate cDNAs and their expression patterns during thermal stress and pupal diapause in the corn earworm
    • Zhang, Q. & Denlinger, D. L. Molecular characterization of heat shock protein 90, 70 and 70 cognate cDNAs and their expression patterns during thermal stress and pupal diapause in the corn earworm. J Insect physiol 56, 138-150 (2010).
    • (2010) J Insect Physiol , vol.56 , pp. 138-150
    • Zhang, Q.1    Denlinger, D.L.2
  • 25
    • 33748372726 scopus 로고    scopus 로고
    • Analysis of bacteria-challenged wild silkmoth, Antheraea mylitta (lepidoptera) transcriptome reveals potential immune genes
    • Gandhe, A. S., Arunkumar, K., John, S. H. & Nagaraju, J. Analysis of bacteria-challenged wild silkmoth, Antheraea mylitta (lepidoptera) transcriptome reveals potential immune genes. BMC Genomics 7, 184 (2006).
    • (2006) BMC Genomics , vol.7 , pp. 184
    • Gandhe, A.S.1    Arunkumar, K.2    John, S.H.3    Nagaraju, J.4
  • 26
    • 38949188599 scopus 로고    scopus 로고
    • Functional analysis of four Gloverin - Like genes in the silkworm, Bombyx mori
    • Kawaoka, S. et al. Functional analysis of four Gloverin - like genes in the silkworm, Bombyx mori. Arch Insect Biochem 67, 87-96 (2008).
    • (2008) Arch Insect Biochem , vol.67 , pp. 87-96
    • Kawaoka, S.1
  • 27
    • 0028150178 scopus 로고
    • Induction and localization of FAD-glucose dehydrogenase (GLD) during encapsulation of abiotic implants in Manduca sexta larvae
    • Cox-Foster, D. L. & Stehr, J. E. Induction and localization of FAD-glucose dehydrogenase (GLD) during encapsulation of abiotic implants in Manduca sexta larvae. J Insect Physiol 40, 235-249 (1994).
    • (1994) J Insect Physiol , vol.40 , pp. 235-249
    • Cox-Foster, D.L.1    Stehr, J.E.2
  • 28
    • 0029257504 scopus 로고
    • Characterization of a Bombyx mori cDNA encoding a novel member of the attacin family of insect antibacterial proteins
    • Sugiyama, M. et al. Characterization of a Bombyx mori cDNA encoding a novel member of the attacin family of insect antibacterial proteins. Insect Biochem Molec 25, 385-392 (1995).
    • (1995) Insect Biochem Molec , vol.25 , pp. 385-392
    • Sugiyama, M.1
  • 29
    • 0025886806 scopus 로고
    • Attacin, an antibacterial protein from Hyalophora cecropia, inhibits synthesis of outer membrane proteins in Escherichia coli by interfering with omp gene transcription
    • Carlsson, A., Engström, P., Palva, E. T. & Bennich, H. Attacin, an antibacterial protein from Hyalophora cecropia, inhibits synthesis of outer membrane proteins in Escherichia coli by interfering with omp gene transcription. Infect Immun 59, 3040-3045 (1991).
    • (1991) Infect Immun , vol.59 , pp. 3040-3045
    • Carlsson, A.1    Engström, P.2    Palva, E.T.3    Bennich, H.4
  • 30
    • 0032923888 scopus 로고    scopus 로고
    • cDNA cloning and gene expression of cecropin D, an antibacterial protein in the silkworm, Bombyx mori
    • Yang, J. et al. cDNA cloning and gene expression of cecropin D, an antibacterial protein in the silkworm, Bombyx mori. Comp Biochem Phys B 122, 409-414 (1999).
    • (1999) Comp Biochem Phys B , vol.122 , pp. 409-414
    • Yang, J.1
  • 31
    • 84891671472 scopus 로고    scopus 로고
    • The Wnt signaling pathway is involved in the regulation of phagocytosis of virus in Drosophila
    • Zhu, F. & Zhang, X. The Wnt signaling pathway is involved in the regulation of phagocytosis of virus in Drosophila. Sci Rep 3 (2013).
    • (2013) Sci Rep , vol.3
    • Zhu, F.1    Zhang, X.2
  • 32
    • 0030990106 scopus 로고    scopus 로고
    • An intestinal mucin is the target substrate for a baculovirus enhancin
    • Wang, P. & Granados, R. R. An intestinal mucin is the target substrate for a baculovirus enhancin. P Natl Acad Sci USA 94, 6977-6982 (1997).
    • (1997) P Natl Acad Sci USA , vol.94 , pp. 6977-6982
    • Wang, P.1    Granados, R.R.2
  • 33
    • 77957885767 scopus 로고    scopus 로고
    • Serpin-1 splicing isoform J inhibits the proSpätzle-activating proteinase HP8 to regulate expression of antimicrobial hemolymph proteins in Manduca sexta
    • An, C., Ragan, E. J. & Kanost, M. R. Serpin-1 splicing isoform J inhibits the proSpätzle-activating proteinase HP8 to regulate expression of antimicrobial hemolymph proteins in Manduca sexta. Dev Comp Immunol 35, 135-141 (2011).
    • (2011) Dev Comp Immunol , vol.35 , pp. 135-141
    • An, C.1    Ragan, E.J.2    Kanost, M.R.3
  • 34
    • 0032546486 scopus 로고    scopus 로고
    • Cloning and Expression of a Novel Gene Encoding a New Antibacterial Peptide from Silkworm, Bombyx mori
    • Kim, S. H. et al. Cloning and Expression of a Novel Gene Encoding a New Antibacterial Peptide from Silkworm, Bombyx mori. Biochem Bioph Res Co 246, 388-392 (1998).
    • (1998) Biochem Bioph Res Co , vol.246 , pp. 388-392
    • Kim, S.H.1
  • 35
    • 36148940256 scopus 로고    scopus 로고
    • Expression of antimicrobial peptide genes encoding Enbocin and Gloverin isoforms in the silkworm, Bombyx mori
    • Kaneko, Y., Furukawa, S., Tanaka, H. & Yamakawa, M. Expression of antimicrobial peptide genes encoding Enbocin and Gloverin isoforms in the silkworm, Bombyx mori. Biosci Biotech Bioch 71, 2233-2241 (2007).
    • (2007) Biosci Biotech Bioch , vol.71 , pp. 2233-2241
    • Kaneko, Y.1    Furukawa, S.2    Tanaka, H.3    Yamakawa, M.4
  • 36
    • 82755168802 scopus 로고    scopus 로고
    • RNAi screening reveals requirement for host cell secretory pathway in infection by diverse families of negativestrand RNA viruses
    • Panda, D. et al. RNAi screening reveals requirement for host cell secretory pathway in infection by diverse families of negativestrand RNA viruses. P Natl Acad Sci USA 108, 19036-19041 (2011).
    • (2011) P Natl Acad Sci USA , vol.108 , pp. 19036-19041
    • Panda, D.1
  • 37
    • 0029610221 scopus 로고
    • Two genes encoding midgut-specific maltase-like polypeptides from Anopheles gambiae
    • Zheng, L., Whang, L. H., Kumar, V. & Kafatos, F. C. Two genes encoding midgut-specific maltase-like polypeptides from Anopheles gambiae. Exp Parasitol 81, 272-283 (1995).
    • (1995) Exp Parasitol , vol.81 , pp. 272-283
    • Zheng, L.1    Whang, L.H.2    Kumar, V.3    Kafatos, F.C.4
  • 38
    • 0024980926 scopus 로고
    • A salivary gland-specific, maltase-like gene of the vector mosquito, Aedes aegypti
    • James, A. A., Blackmer, K. & Racioppi, J. V. A salivary gland-specific, maltase-like gene of the vector mosquito, Aedes aegypti. Gene 75, 73-83 (1989).
    • (1989) Gene , vol.75 , pp. 73-83
    • James, A.A.1    Blackmer, K.2    Racioppi, J.V.3
  • 39
    • 0024978423 scopus 로고
    • Isolation and sequencing of cDNA clones coding for juvenile hormone esterase from Heliothis virescens. Evidence for a catalytic mechanism for the serine carboxylesterases different from that of the serine proteases
    • Hanzlik, T. N., Abdel-Aal, Y., Harshman, L. G. & Hammock, B. D. Isolation and sequencing of cDNA clones coding for juvenile hormone esterase from Heliothis virescens. Evidence for a catalytic mechanism for the serine carboxylesterases different from that of the serine proteases. J Biol Chem 264, 12419-12425 (1989).
    • (1989) J Biol Chem , vol.264 , pp. 12419-12425
    • Hanzlik, T.N.1    Abdel-Aal, Y.2    Harshman, L.G.3    Hammock, B.D.4
  • 40
    • 79953031469 scopus 로고    scopus 로고
    • Odd-skipped maintains prohemocyte potency and blocks blood cell development in Drosophila
    • Gao, H., Wu, X. & Fossett, N. Odd-skipped maintains prohemocyte potency and blocks blood cell development in Drosophila. Genesis 49, 105-116 (2011).
    • (2011) Genesis , vol.49 , pp. 105-116
    • Gao, H.1    Wu, X.2    Fossett, N.3
  • 41
    • 73449084768 scopus 로고    scopus 로고
    • BmCAP, a silkmoth gene encoding multiple protein isoforms characterized by SoHo and SH3 domains: Expression analysis during ovarian follicular development
    • Georgomanolis, T., Iatrou, K. & Swevers, L. BmCAP, a silkmoth gene encoding multiple protein isoforms characterized by SoHo and SH3 domains: Expression analysis during ovarian follicular development. Insect Biochem Molec 39, 892-902 (2009).
    • (2009) Insect Biochem Molec , vol.39 , pp. 892-902
    • Georgomanolis, T.1    Iatrou, K.2    Swevers, L.3
  • 42
    • 70849093364 scopus 로고    scopus 로고
    • 2+-channel α1-subunit co-regulate synaptic transmission and nerve-terminal growth
    • 2+-channel α1-subunit co-regulate synaptic transmission and nerve-terminal growth. J Cell Sci 122, 4109-4121 (2009).
    • (2009) J Cell Sci , vol.122 , pp. 4109-4121
    • Dason, J.S.1
  • 43
    • 0037027739 scopus 로고    scopus 로고
    • Synaptotagmin I functions as a calcium sensor to synchronize neurotransmitter release
    • Yoshihara, M. & Littleton, J. T. Synaptotagmin I functions as a calcium sensor to synchronize neurotransmitter release. Neuron 36, 897-908 (2002).
    • (2002) Neuron , vol.36 , pp. 897-908
    • Yoshihara, M.1    Littleton, J.T.2
  • 44
    • 84883767439 scopus 로고    scopus 로고
    • The Kinesin-3, Unc-104 regulates dendrite morphogenesis and synaptic development in Drosophila
    • Kern, J. V., Zhang, Y. V., Kramer, S., Brenman, J. E. & Rasse, T. M. The Kinesin-3, Unc-104 regulates dendrite morphogenesis and synaptic development in Drosophila. Genetics 195, 59-72 (2013).
    • (2013) Genetics , vol.195 , pp. 59-72
    • Kern, J.V.1    Zhang, Y.V.2    Kramer, S.3    Brenman, J.E.4    Rasse, T.M.5
  • 45
    • 0141557547 scopus 로고    scopus 로고
    • The structure of Aip1p, a WD repeat protein that regulates Cofilin-mediated actin depolymerization
    • Voegtli, W. C., Madrona, A. Y. & Wilson, D. K. The structure of Aip1p, a WD repeat protein that regulates Cofilin-mediated actin depolymerization. J Biol Chem 278, 34373-34379 (2003).
    • (2003) J Biol Chem , vol.278 , pp. 34373-34379
    • Voegtli, W.C.1    Madrona, A.Y.2    Wilson, D.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.