-
1
-
-
0038325772
-
Testing for phylogenetic signal in comparative data: Behavioral traits are more labile
-
Blomberg SP, Garland T Jr, Ives AR (2003) Testing for phylogenetic signal in comparative data: behavioral traits are more labile. Evolution 57:717-745
-
(2003)
Evolution
, vol.57
, pp. 717-745
-
-
Blomberg, S.P.1
Garland, T.2
Ives, A.R.3
-
2
-
-
60949108998
-
Generalized linear mixed models: A practical guide for ecology and evolution
-
Bolker BM, Brooks ME, Clark CJ, Geange SW, Poulsen JR, Stevens MHH, White JSS (2009) Generalized linear mixed models: a practical guide for ecology and evolution. Trends Ecol Evol 24(3):127-135. doi:10.1016/j.tree.2008.10.008
-
(2009)
Trends Ecol Evol
, vol.24
, Issue.3
, pp. 127-135
-
-
Bolker, B.M.1
Brooks, M.E.2
Clark, C.J.3
Geange, S.W.4
Poulsen, J.R.5
Stevens, M.6
White, J.7
-
3
-
-
29744464963
-
Muscle fibre-type variation in lizards (Squamata) and phylogenetic reconstruction of hypothesized ancestral states
-
Bonine KE, Gleeson TT, Garland T Jr (2005) Muscle fibre-type variation in lizards (Squamata) and phylogenetic reconstruction of hypothesized ancestral states. J Exp Biol 208:4529-4547
-
(2005)
J Exp Biol
, vol.208
, pp. 4529-4547
-
-
Bonine, K.E.1
Gleeson, T.T.2
Garland, T.3
-
4
-
-
0033939427
-
Phylogenetic analysis of coadaptation in behavior, diet, and body size in the African antelope
-
Brashares JS, Garland T Jr, Arcese P (2000) Phylogenetic analysis of coadaptation in behavior, diet, and body size in the African antelope. Behav Ecol 11(4):452-463
-
(2000)
Behav Ecol
, vol.11
, Issue.4
, pp. 452-463
-
-
Brashares, J.S.1
Garland, T.2
Arcese, P.3
-
5
-
-
0030336792
-
Testing hypotheses of correlated evolution using phylogenetically independent contrasts: Sensitivity to deviations from Brownian motion
-
Diaz-Uriarte R, Garland T Jr (1996) Testing hypotheses of correlated evolution using phylogenetically independent contrasts: sensitivity to deviations from Brownian motion. Syst Biol 45(1):27-47
-
(1996)
Syst Biol
, vol.45
, Issue.1
, pp. 27-47
-
-
Diaz-Uriarte, R.1
Garland, T.2
-
6
-
-
0003597030
-
-
2nd edn. Oxford University Press, Oxford
-
Diggle P, Heagerty P, Liang K, Zeger S (2004) Analysis of longitudinal data, 2nd edn. Oxford University Press, Oxford
-
(2004)
Analysis of Longitudinal Data
-
-
Diggle, P.1
Heagerty, P.2
Liang, K.3
Zeger, S.4
-
7
-
-
84890701066
-
Phylogenetic analysis of mammalian maximal oxygen consumption during exercise
-
Dlugosz EM, Chappell MA, Meek TH, Szafranska P, Zub K, Konarzewski M, Jones JH, Bicudo JEPW, Careau V, Garland T Jr (2013) Phylogenetic analysis of mammalian maximal oxygen consumption during exercise. J Exp Biol 216:4712-4721
-
(2013)
J Exp Biol
, vol.216
, pp. 4712-4721
-
-
Dlugosz, E.M.1
Chappell, M.A.2
Meek, T.H.3
Szafranska, P.4
Zub, K.5
Konarzewski, M.6
Jones, J.H.7
Bicudo, J.8
Careau, V.9
Garland, T.10
-
10
-
-
0024181337
-
Phylogenies and quantitative characters
-
Felsenstein J (1988) Phylogenies and quantitative characters. Annu Rev Ecol Syst 19:445-471
-
(1988)
Annu Rev Ecol Syst
, vol.19
, pp. 445-471
-
-
Felsenstein, J.1
-
11
-
-
84855405271
-
A comparative method for both discrete and continuous characters using the threshold model
-
Felsenstein J (2012) A comparative method for both discrete and continuous characters using the threshold model. Am Nat 179(2):145-156. doi:10.1086/663681
-
(2012)
Am Nat
, vol.179
, Issue.2
, pp. 145-156
-
-
Felsenstein, J.1
-
12
-
-
0002178053
-
Bias reduction of maximum likelihood estimates
-
Firth D (1993) Bias reduction of maximum likelihood estimates. Biometrika 80(1):27-38
-
(1993)
Biometrika
, vol.80
, Issue.1
, pp. 27-38
-
-
Firth, D.1
-
13
-
-
0036920097
-
Phylogenetic analysis and comparative data: A test and review of evidence
-
Freckleton RP, Harvey PH, Pagel M (2002) Phylogenetic analysis and comparative data: a test and review of evidence. Am Nat 160:712-726
-
(2002)
Am Nat
, vol.160
, pp. 712-726
-
-
Freckleton, R.P.1
Harvey, P.H.2
Pagel, M.3
-
14
-
-
12044255022
-
Phylogenetic analysis of covariance by computer-simulation
-
Garland T Jr, Dickerman AW, Janis CM, Jones JA (1993) Phylogenetic analysis of covariance by computer-simulation. Syst Biol 42(3):265-292
-
(1993)
Syst Biol
, vol.42
, Issue.3
, pp. 265-292
-
-
Garland, T.1
Dickerman, A.W.2
Janis, C.M.3
Jones, J.A.4
-
15
-
-
11944256302
-
Procedures for the analysis of comparative data using phylogenetically independent contrasts
-
Garland T Jr, Harvey PH, Ives AR (1992) Procedures for the analysis of comparative data using phylogenetically independent contrasts. Syst Biol 41:18-32
-
(1992)
Syst Biol
, vol.41
, pp. 18-32
-
-
Garland, T.1
Harvey, P.H.2
Ives, A.R.3
-
16
-
-
33746009658
-
An introduction to phylogenetically based statistical methods, with a new method for confidence intervals on ancestral values
-
Garland T Jr, Midford PE, Ives AR (1999) An introduction to phylogenetically based statistical methods, with a new method for confidence intervals on ancestral values. Am Zool 39:374-388
-
(1999)
Am Zool
, vol.39
, pp. 374-388
-
-
Garland, T.1
Midford, P.E.2
Ives, A.R.3
-
17
-
-
0004012196
-
-
1st edn. Chapman and Hall, London
-
Gelman A, Carlin JB, Stern HS, Rubin DB (1995) Bayesian data analysis, 1st edn. Chapman and Hall, London
-
(1995)
Bayesian Data Analysis
-
-
Gelman, A.1
Carlin, J.B.2
Stern, H.S.3
Rubin, D.B.4
-
19
-
-
0024975994
-
The phylogenetic regression. Trans R Soc Lond B
-
Grafen A (1989) The phylogenetic regression. Trans R Soc Lond B, Biol Sci 326:119-157
-
(1989)
Biol Sci
, vol.326
, pp. 119-157
-
-
Grafen, A.1
-
20
-
-
77749249761
-
MCMC methods for multi-response generalized linear mixed models: The MCMCglmm R package
-
Hadfield JD (2010) MCMC methods for multi-response generalized linear mixed models: the MCMCglmm R package. J Stat Softw 33:1-22
-
(2010)
J Stat Softw
, vol.33
, pp. 1-22
-
-
Hadfield, J.D.1
-
22
-
-
77749279661
-
General quantitative genetic methods for comparative biology: Phylogenies, taxonomies and multi-trait models for continuous and categorical characters
-
Hadfield JD, Nakagawa S (2010) General quantitative genetic methods for comparative biology: phylogenies, taxonomies and multi-trait models for continuous and categorical characters. J Evol Biol 23(3):494-508. doi:10.1111/j.1420-9101.2009.01915.x
-
(2010)
J Evol Biol
, vol.23
, Issue.3
, pp. 494-508
-
-
Hadfield, J.D.1
Nakagawa, S.2
-
23
-
-
0030772835
-
Stabilizing selection and the comparative analysis of adaptation
-
Hansen TF (1997) Stabilizing selection and the comparative analysis of adaptation. Evolution 51:1341-1351
-
(1997)
Evolution
, vol.51
, pp. 1341-1351
-
-
Hansen, T.F.1
-
24
-
-
27644562177
-
Assessing current adaptive and phylogenetic inertia explanations of trait evolution: The need for controlled comparisons
-
Hansen TF, Orzack SH (2005) Assessing current adaptive and phylogenetic inertia explanations of trait evolution: the need for controlled comparisons. Evolution 59:2063-2072
-
(2005)
Evolution
, vol.59
, pp. 2063-2072
-
-
Hansen, T.F.1
Orzack, S.H.2
-
27
-
-
0037199788
-
A solution to the problem of separation in logistic regression
-
Heinze G, Schemper M (2002) A solution to the problem of separation in logistic regression. Stat Med 21:2409-2419
-
(2002)
Stat Med
, vol.21
, pp. 2409-2419
-
-
Heinze, G.1
Schemper, M.2
-
29
-
-
72049108111
-
Phylogenetic logistic regression for binary dependent variables
-
Ives AR, Garland T (2010) Phylogenetic logistic regression for binary dependent variables. Syst Biol 59(1):9-26. doi:10.1093/sysbio/syp074
-
(2010)
Syst Biol
, vol.59
, Issue.1
, pp. 9-26
-
-
Ives, A.R.1
Garland, T.2
-
30
-
-
80051532520
-
Generalized linear mixed models for phylogenetic analyses of community structure
-
Ives AR, Helmus MR (2011) Generalized linear mixed models for phylogenetic analyses of community structure. Ecol Monogr 81:511-525
-
(2011)
Ecol Monogr
, vol.81
, pp. 511-525
-
-
Ives, A.R.1
Helmus, M.R.2
-
31
-
-
84966002657
-
The social organisation of antelope in relation to their ecology
-
Jarman PJ (1974) The social organisation of antelope in relation to their ecology. Behaviour 48:215-267
-
(1974)
Behaviour
, vol.48
, pp. 215-267
-
-
Jarman, P.J.1
-
32
-
-
0004113694
-
-
2nd edn. Wiley, New York
-
Judge GG, Griffiths WE, Hill RC, Lutkepohl H, Lee T-C (1985) The theory and practice of econometrics, 2nd edn. Wiley, New York
-
(1985)
The Theory and Practice of Econometrics
-
-
Judge, G.G.1
Griffiths, W.E.2
Hill, R.C.3
Lutkepohl, H.4
Lee, T.-C.5
-
33
-
-
77953882250
-
Picante: R tools for integrating phylogenies and ecology
-
Kembel SW, Cowan PD, Helmus MR, Cornwell WK, Morlon H, Ackerly DD, Blomberg SP, Webb CO (2010) Picante: R tools for integrating phylogenies and ecology. Bioinformatics 26:1463-1464
-
(2010)
Bioinformatics
, vol.26
, pp. 1463-1464
-
-
Kembel, S.W.1
Cowan, P.D.2
Helmus, M.R.3
Cornwell, W.K.4
Morlon, H.5
Ackerly, D.D.6
Blomberg, S.P.7
Webb, C.O.8
-
34
-
-
46149108174
-
Morphometrics of the avian small intestine, compared with non-flying mammals: A phylogenetic approach
-
Lavin SR, Karasov WH, Ives AR, Middleton KM, Garland T Jr (2008) Morphometrics of the avian small intestine, compared with non-flying mammals: a phylogenetic approach. Physiol Biochem Zool 81:526-550
-
(2008)
Physiol Biochem Zool
, vol.81
, pp. 526-550
-
-
Lavin, S.R.1
Karasov, W.H.2
Ives, A.R.3
Middleton, K.M.4
Garland, T.5
-
35
-
-
0036006018
-
Adaptive constraints and the phylogenetic comparative method: A computer simulation test
-
Martins EP, Diniz JAF, Housworth EA (2002) Adaptive constraints and the phylogenetic comparative method: a computer simulation test. Evolution 56(1):1-13
-
(2002)
Evolution
, vol.56
, Issue.1
, pp. 1-13
-
-
Martins, E.P.1
Diniz, J.2
Housworth, E.A.3
-
36
-
-
0026054313
-
Phylogenetic analyses of the correlated evolution of continuous characters: A simulation study
-
Martins EP, Garland T Jr (1991) Phylogenetic analyses of the correlated evolution of continuous characters: a simulation study. Evolution 45:534-557
-
(1991)
Evolution
, vol.45
, pp. 534-557
-
-
Martins, E.P.1
Garland, T.2
-
37
-
-
0030619995
-
Phylogenies and the comparative method: A general approach to incorporating phylogenetic information into the analysis of interspecific data
-
Erratum 153:448
-
Martins EP, Hansen TF (1997) Phylogenies and the comparative method: a general approach to incorporating phylogenetic information into the analysis of interspecific data. Am Nat 149:646-667. Erratum 153:448
-
(1997)
Am Nat
, vol.149
, pp. 646-667
-
-
Martins, E.P.1
Hansen, T.F.2
-
39
-
-
84925044629
-
-
Wiley, Hoboken, NJ
-
McCulloch CE, Searle SR, Neuhaus JM (2008) Generalized, linear, and mixed models. Wiley, Hoboken, NJ
-
(2008)
Generalized, Linear, and Mixed Models
-
-
Mc Culloch, C.E.1
Searle, S.R.2
Neuhaus, J.M.3
-
40
-
-
0028097770
-
Detecting correlated evolution on phylogenies: A general method for the comparative analysis of discrete characters
-
Pagel M (1994) Detecting correlated evolution on phylogenies: a general method for the comparative analysis of discrete characters. Proc R Soc Lond Ser B Biol Sci 255(1342):37-45
-
(1994)
Proc R Soc Lond Ser B Biol Sci
, vol.255
, Issue.1342
, pp. 37-45
-
-
Pagel, M.1
-
41
-
-
1042304216
-
APE: Analyses of phylogenetics and evolution in R language
-
Paradis E, Claude J, Strimmer K (2004) APE: analyses of phylogenetics and evolution in R language. Bioinformatics 20:289-290
-
(2004)
Bioinformatics
, vol.20
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
42
-
-
78650722302
-
Phylogenetic signal and linear regression on species data
-
Revell LJ (2010) Phylogenetic signal and linear regression on species data. Methods Ecol Evol 1:319-329
-
(2010)
Methods Ecol Evol
, vol.1
, pp. 319-329
-
-
Revell, L.J.1
-
43
-
-
84956971006
-
Analyzing continuous character evolution on a phylogeny
-
Revell LJ (2012) Analyzing continuous character evolution on a phylogeny. Integr Comp Biol 52:E145-E145
-
(2012)
Integr Comp Biol
, vol.52
-
-
Revell, L.J.1
-
44
-
-
66249102409
-
Phylogenetic signal, evolutionary process, and rate
-
Revell LJ, Harmon LJ, Collar DC (2008) Phylogenetic signal, evolutionary process, and rate. Syst Biol 57(4):591-601. doi:10.1080/10635150802302427
-
(2008)
Syst Biol
, vol.57
, Issue.4
, pp. 591-601
-
-
Revell, L.J.1
Harmon, L.J.2
Collar, D.C.3
-
45
-
-
84858788706
-
Phylogenetic analyses: Comparing species to infer adaptations and physiological mechanisms
-
Rezende EL, Diniz JAF (2012) Phylogenetic analyses: comparing species to infer adaptations and physiological mechanisms. Compr Physiol 2(1):639-674. doi:10.1002/cphy.c100079
-
(2012)
Compr Physiol
, vol.2
, Issue.1
, pp. 639-674
-
-
Rezende, E.L.1
Diniz, J.2
-
47
-
-
84875248934
-
Comparing parent-offspring regression with frequentist and Bayesian animal models to estimate heritability in wild populations: A simulation study for Gaussian and binary traits
-
Villemereuil P, Gimenez O, Doligez B (2013) Comparing parent-offspring regression with frequentist and Bayesian animal models to estimate heritability in wild populations: a simulation study for Gaussian and binary traits. Methods Ecol E vol 4(3):260-275. doi:10.1111/2041-210x.12011
-
(2013)
Methods Ecol E
, vol.4
, Issue.3
, pp. 260-275
-
-
Villemereuil, P.1
Gimenez, O.2
Doligez, B.3
|