Environmental Monitoring: Inferring the Diatom Index from Next-Generation Sequencing Data

Environmental Science and Technology

Volumn 49, Issue 13, 2015, Pages 7597-7605

  Visco, Joana Amorim ^a   Apothéloz Perret Gentil, Laure ^a   Cordonier, Arielle ^b   Esling, Philippe ^a,c   Pillet, Loïc ^a,d   Pawlowski, Jan ^a  

^a UNIVERSITY OF GENEVA   (Switzerland)

^b Water Ecology Service   (Switzerland)

^c SORBONNE UNIVERSITÉ   (France)

^d STATION BIOLOGIQUE DE ROSCOFF   (France)

Author keywords

[No Author keywords available]

Indexed keywords

AQUATIC ECOSYSTEMS; NUCLEIC ACIDS; PHYTOPLANKTON; RIVERS; WATER QUALITY;

ASSESSMENT OF WATER QUALITIES; ENVIRONMENTAL MONITORING; ENVIRONMENTAL SAMPLE; NEXT-GENERATION SEQUENCING; PROOF OF CONCEPT; QUALITY STATUS; REFERENCE DATABASE; RELATIVE ABUNDANCE;

GENE ENCODING;

DNA; RNA;

AQUATIC ECOSYSTEM; ASSESSMENT METHOD; BIOINDICATOR; BIOMONITORING; DATA SET; DIATOM; ENVIRONMENTAL MONITORING; FRESHWATER ECOSYSTEM; INDEX METHOD; MOLECULAR ANALYSIS; MORPHOLOGY; POLLUTION EFFECT; RELATIVE ABUNDANCE; TAXONOMY;

AQUATIC ENVIRONMENT; ARTICLE; BIOLOGICAL MONITORING; DIATOM; ECOSYSTEM; ENVIRONMENTAL MONITORING; MICROSCOPY; MORPHOLOGY; MORPHOSPECIES; NEXT GENERATION SEQUENCING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; QUANTITATIVE ANALYSIS; REFERENCE DATABASE; RIVER; SPECIES; THALASSIOSIRA PSEUDONANA; WATER QUALITY; CLASSIFICATION; GENETICS; HIGH THROUGHPUT SEQUENCING; MOLECULAR GENETICS; PROCEDURES; SWITZERLAND;

GENEVA [SWITZERLAND]; SWITZERLAND;

BACILLARIOPHYTA;

DIATOMS; ECOSYSTEM; ENVIRONMENTAL MONITORING; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MOLECULAR SEQUENCE DATA; PHYLOGENY; RIVERS; SWITZERLAND; WATER QUALITY;

EID: 84936884349     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es506158m     Document Type: Article

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