Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism

Plant Journal

Volumn 83, Issue 2, 2015, Pages 189-212

  Warren, René L ^a   Keeling, Christopher I ^b   Yuen, Macaire Man Saint ^b   Raymond, Anthony ^a   Taylor, Greg A ^a   Vandervalk, Benjamin P ^a   Mohamadi, Hamid ^a   Paulino, Daniel ^a   Chiu, Readman ^a   Jackman, Shaun D ^a   Robertson, Gordon ^a   Yang, Chen ^a   Boyle, Brian ^h   Hoffmann, Margarete ^c   Weigel, Detlef ^c   Nelson, David R ^d   Ritland, Carol ^e   Isabel, Nathalie ^f   Jaquish, Barry ^g   Yanchuk, Alvin ^g   Bousquet, Jean ^h   Jones, Steven J M ^a,e,i   Mackay, John ^h,j   Birol, Inanc ^a,e,i   Bohlmann, Joerg ^b,e   more..

^a BRITISH COLUMBIA CANCER AGENCY   (Canada)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^c MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY   (Germany)

^d UNIVERSITY OF TENNESSEE HEALTH SCIENCE CENTER   (United States)

^e UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^f LAURENTIAN FORESTRY CENTRE   (Canada)

^g RESEARCH BRANCH   (Canada)

^h UNIVERSITÉ LAVAL   (Canada)

ⁱ SIMON FRASER UNIVERSITY   (Canada)

^j UNIVERSITY OF OXFORD   (United Kingdom)

more..

Author keywords

ABySS; Bloom filter; conifer genomes; genome finishing; genome scaffolding; whole genome shotgun assembly

Indexed keywords

GENES; METABOLISM; NETWORK SECURITY; SCAFFOLDS;

ABYSS; BLOOM FILTERS; CONIFER GENOME; EXPERT ANNOTATIONS; GENOME ASSEMBLY; PHENYLPROPANOID PATHWAYS; TRANSCRIPTOMICS; WHOLE-GENOME SHOTGUN;

FORESTRY;

CONIFEROPHYTA; GYMNOSPERMAE; PICEA GLAUCA;

CYTOCHROME P450; PHENOL DERIVATIVE; TERPENE; TERPENE SYNTHASE; TRANSCRIPTOME; TRANSFERASE;

BIOLOGY; GENETICS; METABOLISM; MULTIGENE FAMILY; PLANT GENOME; SPRUCE; VALIDATION STUDY;

ALKYL AND ARYL TRANSFERASES; COMPUTATIONAL BIOLOGY; CYTOCHROME P-450 ENZYME SYSTEM; GENOME, PLANT; MULTIGENE FAMILY; PHENOLS; PICEA; TERPENES; TRANSCRIPTOME;

EID: 84936845853     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/tpj.12886     Document Type: Article

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