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Volumn 1131, Issue , 2014, Pages 427-446

Epitope mapping by epitope excision, hydrogen/deuterium exchange, and peptide-panning techniques combined with in silico analysis

Author keywords

B cell epitope; Epitope excision; Epitope based vaccines; Hydrogen deuterium exchange; Peptide panning techniques

Indexed keywords

DEUTERIUM; EPITOPE; FORMIC ACID; IMMOBILIZED ANTIBODY; PEPTIDE; TRYPSIN;

EID: 84934440711     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-992-5_26     Document Type: Review
Times cited : (7)

References (17)
  • 1
    • 84876926521 scopus 로고    scopus 로고
    • Characterization of epitopes recognized by monoclonal antibodies: Experimental approaches supported by freely accessible bioinformatic tools
    • Clementi N, Mancini N, Castelli M, Clementi M, Burioni R (2013) Characterization of epitopes recognized by monoclonal antibodies: experimental approaches supported by freely accessible bioinformatic tools. Drug Discov Today 18(9-10):464-471
    • (2013) Drug Discov Today , vol.18 , Issue.9-10 , pp. 464-471
    • Clementi, N.1    Mancini, N.2    Castelli, M.3    Clementi, M.4    Burioni, R.5
  • 2
    • 27144541763 scopus 로고    scopus 로고
    • Determination of protein-derived epitopes by mass spectrometry
    • Hager-Braun C, Tomer KB (2005) Determination of protein-derived epitopes by mass spectrometry. Expert Rev Proteomics 2: 745-756
    • (2005) Expert Rev Proteomics , vol.2 , pp. 745-756
    • Hager-Braun, C.1    Tomer, K.B.2
  • 3
    • 62549108693 scopus 로고    scopus 로고
    • Epitope mapping by amide hydrogen/deuterium exchange coupled with immobilization of antibody, on-line proteolysis, liquid chromatography and mass spectrometry
    • Coales SJ, Tuske SJ, Tomasso JC, Hamuro Y (2009) Epitope mapping by amide hydrogen/deuterium exchange coupled with immobilization of antibody, on-line proteolysis, liquid chromatography and mass spectrometry. Rapid Commun Mass Spectrom 23:639-647
    • (2009) Rapid Commun Mass Spectrom , vol.23 , pp. 639-647
    • Coales, S.J.1    Tuske, S.J.2    Tomasso, J.C.3    Hamuro, Y.4
  • 4
    • 0030817804 scopus 로고    scopus 로고
    • Epitope mapping by screening of phage display libraries of a monoclonal antibody directed against the receptor binding domain of human alpha2-macroglobulin
    • Birkenmeier G, Osman AA, Kopperschlager G, Mothes T (1997) Epitope mapping by screening of phage display libraries of a monoclonal antibody directed against the receptor binding domain of human alpha2-macroglobulin. FEBS Lett 416:193-196
    • (1997) FEBS Lett , vol.416 , pp. 193-196
    • Birkenmeier, G.1    Osman, A.A.2    Kopperschlager, G.3    Mothes, T.4
  • 5
    • 0032502874 scopus 로고    scopus 로고
    • Identification and location on syndecan-1 core protein of the epitopes of B-B2 and B-B4 monoclonal antibodies
    • Dore JM, Morard F, Vita N, Wijdenes J (1998) Identifi cation and location on syndecan-1 core protein of the epitopes of B-B2 and B-B4 monoclonal antibodies. FEBS Lett 426:67-70
    • (1998) FEBS Lett , vol.426 , pp. 67-70
    • Dore, J.M.1    Morard, F.2    Vita, N.3    Wijdenes, J.4
  • 6
    • 0034653534 scopus 로고    scopus 로고
    • Prediction of the immunodominant epitope of the pyruvate dehydrogenase complex E2 in primary biliary cirrhosis using phage display
    • Rowley MJ, Scealy M, Whisstock JC, Jois JA, Wijeyewickrema LC, Mackay IR (2000) Prediction of the immunodominant epitope of the pyruvate dehydrogenase complex E2 in primary biliary cirrhosis using phage display. J Immunol 164:3413-3419
    • (2000) J Immunol , vol.164 , pp. 3413-3419
    • Rowley, M.J.1    Scealy, M.2    Whisstock, J.C.3    Jois, J.A.4    Wijeyewickrema, L.C.5    Mackay, I.R.6
  • 7
    • 82955194795 scopus 로고    scopus 로고
    • A human monoclonal antibody with neutralizing activity against highly divergent influenza subtypes
    • Clementi N et al (2011) A human monoclonal antibody with neutralizing activity against highly divergent influenza subtypes. PLoS One 6:e28001
    • (2011) PLoS One , vol.6
    • Clementi, N.1
  • 8
    • 84870588311 scopus 로고    scopus 로고
    • Influenza B-cells protective epitope characterization: A passkey for the rational design of new broadrange anti-influenza vaccines
    • Clementi N, Criscuolo E, Castelli M, Mancini N, Clementi M, Burioni R (2012) Influenza B-cells protective epitope characterization: a passkey for the rational design of new broadrange anti-influenza vaccines. Viruses 4: 3090-3108
    • (2012) Viruses , vol.4 , pp. 3090-3108
    • Clementi, N.1    Criscuolo, E.2    Castelli, M.3    Mancini, N.4    Clementi, M.5    Burioni, R.6
  • 9
    • 84859364851 scopus 로고    scopus 로고
    • A non-VH1-69 heterosubtypic neutralizing human monoclonal antibody protects mice against H1N1 and H5N1 viruses
    • De Marco D et al (2012) A non-VH1-69 heterosubtypic neutralizing human monoclonal antibody protects mice against H1N1 and H5N1 viruses. PLoS One 7:e34415
    • (2012) PLoS One , vol.7
    • De Marco, D.1
  • 10
    • 77954040514 scopus 로고    scopus 로고
    • Hepatitis C virus (HCV) infection may elicit neutralizing antibodies targeting epitopes conserved in all viral genotypes
    • Mancini N et al (2009) Hepatitis C virus (HCV) infection may elicit neutralizing antibodies targeting epitopes conserved in all viral genotypes. PLoS One 4:e8254
    • (2009) PLoS One , vol.4
    • Mancini, N.1
  • 11
    • 33644846839 scopus 로고    scopus 로고
    • Cloning and molecular characterization of a human recombinant IgG Fab binding to the Tat protein of human immunodefi ciency virus type 1 (HIV-1) derived from the repertoire of a seronegative patient
    • Mancini N et al (2006) Cloning and molecular characterization of a human recombinant IgG Fab binding to the Tat protein of human immunodefi ciency virus type 1 (HIV-1) derived from the repertoire of a seronegative patient. Mol Immunol 43:1363-1369
    • (2006) Mol Immunol , vol.43 , pp. 1363-1369
    • Mancini, N.1
  • 12
    • 13844255333 scopus 로고    scopus 로고
    • Broadly neutralizing anti-HIV antibody 4E10 recognizes a helical conformation of a highly conserved fusionassociated motif in gp41
    • Cardoso RM et al (2005) Broadly neutralizing anti-HIV antibody 4E10 recognizes a helical conformation of a highly conserved fusionassociated motif in gp41. Immunity 22:163-173
    • (2005) Immunity , vol.22 , pp. 163-173
    • Cardoso, R.M.1
  • 13
    • 36448991500 scopus 로고    scopus 로고
    • Clustal W and Clustal X version 2.0
    • Larkin MA et al (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23:2947-2948
    • (2007) Bioinformatics , vol.23 , pp. 2947-2948
    • Larkin, M.A.1
  • 14
    • 6044236552 scopus 로고    scopus 로고
    • Analysis for free: Comparing programs for sequence analysis
    • Tippmann HF (2004) Analysis for free: comparing programs for sequence analysis. Brief Bioinform 5:82-87
    • (2004) Brief Bioinform , vol.5 , pp. 82-87
    • Tippmann, H.F.1
  • 16
    • 36549031650 scopus 로고    scopus 로고
    • Pepitope: Epitope mapping from affinity-selected peptides
    • Mayrose I et al (2007) Pepitope: epitope mapping from affinity-selected peptides. Bioinformatics 23:3244-3246
    • (2007) Bioinformatics , vol.23 , pp. 3244-3246
    • Mayrose, I.1
  • 17
    • 0037197254 scopus 로고    scopus 로고
    • Novel computer program for fast exact calculation of accessible and molecular surface areas and average surface curvature
    • PMID: 11939594
    • Tsodikov OV, Record MT Jr, Sergeev YV (2002) Novel computer program for fast exact calculation of accessible and molecular surface areas and average surface curvature. J Comput Chem 23(6):600-609. PMID: 11939594
    • (2002) J Comput Chem , vol.23 , Issue.6 , pp. 600-609
    • Tsodikov, O.V.1    Record Jr., M.T.2    Sergeev, Y.V.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.