Methods for generation and analysis of fluorescent protein-tagged maize lines

Methods in Molecular Biology

Volumn 526, Issue , 2009, Pages 71-89

  Mohanty, Amitabh ^a   Yang, Yan ^b   Luo, Anding ^b   Sylvester, Anne W ^c   Jackson, David ^b  

^a DUPONT COMPANY   (United States)

^b Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

^c UNIVERSITY OF WYOMING   (United States)

Author keywords

Confocal microscopy; Gateway cloning ; Green fluorescent protein (GFP); Maize; Native regulatory elements; Protein localization; Red FP (RFP); Tissue specific expression; Triple template PCR (TTPCR); Yellow FP (YFP)

Indexed keywords

EID: 84934435834     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-59745-494-0_6     Document Type: Article

References (27)

1. Chalfie, M., Tu, Y., Euskirchen, G., Ward William, W. and Prasher Douglas, C. (1994) Green fluorescent protein as a marker for gene expression. Science 263 802-805
2. Shaner, N. C., Steinbach, P. A. and Tsien, R. Y. (2005) A guide to choosing fluorescent proteins. Nat. Meth. 2 (12) 905-909
3. Mathur, J., (2007) The illuminated plant cell. Trends Plant Sci. 12 (11) 506-513
4. Patterson, G. H. and Lippincott-Schwartz, J. (2002) A photoactivatable GFP for selective photolabeling of proteins and cells. Science. 297 (5588) 1873-1877
5. Griesbeck, O., Baird, G. S., Campbell, R. E., Zacharias, D. A. and Tsien, R. Y. (2001) Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications. J. Biol. Chem. 276 29188-29194
6. Boute, N., Jockers, R. and Issad, T. (2002) The use of resonance energy transfer in high-throughput screening: Bret versus fret. Trends Pharmacol. Sci. 23 351-354
7. Cutler, S. R., Ehrhardt, D. W., Griffitts, J. S. and Somerville, C. R. (2000) Random gfp::Cdna fusions enable visualization of subcellular structures in cells of arabidopsis at a high frequency. Proc. Natl. Acad. Sci.USA. 97 3718-3723
8. Koroleva, O. A., Tomlinson, M. L., Leader, D., Shaw, P. and Doonan, J. H. (2005) Highthroughput protein localization in arabidopsis using Agrobacterium -mediated transient expression of gfp-orf fusions. Plant J. 41 162-174
9. Tian, G.-W., Mohanty, A., Chary, S. N., Li, S., Paap, B., Drakakaki, G., Kopec, C. D., Li, J., Ehrhardt, D., Jackson, D., Rhee, S. Y., Raikhel, N. V. and Citovsky, V. (2004) Highthroughput fluorescent tagging of full-length arabidopsis gene products in planta. Plant Physiol. 135 25-38
10. Williams, P., Hardeman, K., Fowler, J. and Rivin, C. (2006) Divergence of duplicated genes in maize: Evolution of contrasting targeting information for enzymes in the porphyrin pathway. Plant J. 45 727-739
11. Saleh, A., Lumbreras, V., Lopez, C., Kizis, E. D. P.-D. and Pages, M. (2006) Maize dbf1-interactor protein 1 containing an r3h domain is a potential regulator of dbf1 activity in stress responses. Plant J. 46 747-757
12. Herrmann, M. M., Pinto, S., Kluth, J., Wienand, U. and Lorbiecke, R. (2006) The PTI1-like kinase ZmPti1a from maize ( Zea mays l.) co-localizes with callose at the plasma membrane of pollen and facilitates a competitive advantage to the male gametophyte. BMC Plant Biol. 6 22
13. Marton, M. L., Cordts, S., Broadhvest, J. and Dresselhaus, T. (2005) Micropylar pollen tube guidance by egg apparatus 1 of maize. Science 307 573-576
14. Dresselhaus, T., Amien, S., Marton, M., Strecke, A., Brettschneider, R. and Cordts, S. (2005) Transparent leaf area1 encodes a secreted proteolipid required for anther maturation, morphogenesis, and differentiation during leaf development in maize. Plant Cell. 17 730-745
15. Ma, Z. and Dooner, H. K. (2004) A mutation in the nuclear-encoded plastid ribosomal protein s9 leads to early embryo lethality in maize. Plant J. 37 92-103
16. Ono, A., Kim, S.-H. and Walbot, V. (2002) Subcellular localization of mura and murb proteins encoded by the maize mudr transposon. Plant Mol. Biol. 50 599-611
17. Beardslee, T. A., Roy-Chowdhury, S., Jaiswal, P., Buhot, L., Lerbs-Mache, S., Stern, D. B. and Allison, L. A. (2002) A nucleus-encoded maize protein with sigma factor activity accumulates in mitochondria and chloroplasts. Plant J. 31 199-209
18. Taguchi-Shiobara, F., Yuan, Z., Hake, S. and Jackson, D. (2001) The fasciated ear2 gene encodes a leucine-rich repeat receptor-like protein that regulates shoot meristem proliferation in maize. Genes Dev. 15 2755-2766
19. Rottgers, K., Krohn, N. M., Lichota, J., Stemmer, C., Merkle, T. and Grasser, K. D. (2000) DNA-interactions and nuclear localisation of the chromosomal hmg domain protein ssrp1 from maize. Plant J. 23 395-405
20. Ivanchenko, M., Vejlupkova, Z., Quatrano, R. S. and Fowler, J. E. (2000) Maize rop7 gtpase contains a unique, caax box-independent plasma membrane targeting signal. Plant J. 24 79-90
21. Landy, A. (1989) Dynamic, structural, and regulatory aspects of lambda site-specific recombination. Annu. Rev. Biochem. 58 913-941
22. Chan, A. P., Pertea, G., Cheung, F., Lee, D., Zheng, L., Whitelaw, C., Pontaroli, A. C., SanMiguel, P., Yuan, Y., Bennetzen, J., Barbazuk, W. B., Quackenbush, J. and Rabinowicz, P. D. (2006) The tigr maize database. Nucl. Acids Res. 34 D771-776
23. Fu, Y., Emrich, S. J., Guo, L., Wen, T. J., Ashlock, D. A., Aluru, S. and Schnable, P. S. (2005) Quality assessment of maize assembled genomic islands (magis) and largescale experimental verification of predicted genes. Proc. Natl. Acad. Sci. USA 102 12282-12287
24. Wach, A. (1996) PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in. S. cerevisiae. Yeast 12 259-265
25. Rozen, S. and H. Skaletsky (1999) Primer3 on the WWW for general users and for biologist programmers. Meth. Mol. Biol. 132 365-386
26. Campbell, R. E., Tour, O., Palmer, A. E., Steinbach, P. A., Baird, G. S., Zacharias, D. A. and Tsien, R. Y. (2002) A monomeric red fluorescent protein. Proc. Natl. Acad. Sci. USA. 99 7877-7882
27. Paz, M., Martinez, J., Kalvig, A., Fonger, T. and Wang, K. (2006) Improved cotyledonary node method using an alternative explant derived from mature seed for efficient Agrobacterium -mediated soybean transformation. Plant Cell Rep. 25 206-213