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Volumn 1, Issue 1, 2013, Pages 370-385

Selecting parameters for bayesian calibration of a process-based model: A methodology based on canonical correlation analysis

Author keywords

Bayesian calibration; Canonical correlation analysis; Parameter screening; Sensitivity analysis

Indexed keywords

BAYESIAN NETWORKS; CORRELATION METHODS; FORESTRY; SAMPLING;

EID: 84933532694     PISSN: None     EISSN: 21662525     Source Type: Journal    
DOI: 10.1137/120891344     Document Type: Article
Times cited : (20)

References (34)
  • 1
    • 0000353872 scopus 로고    scopus 로고
    • ICBM: The introductory carbon balance model for exploration of soil carbon balances
    • O. Andrén and T. Kätterer, ICBM: The introductory carbon balance model for exploration of soil carbon balances, Ecol. Appl., 7 (1997), pp. 1226–1236.
    • (1997) Ecol. Appl , vol.7 , pp. 1226-1236
    • Andrén, O.1    Kätterer, T.2
  • 2
    • 57849088168 scopus 로고    scopus 로고
    • A tutorial on adaptive MCMC
    • C. Andrieu and J. Thoms, A tutorial on adaptive MCMC, Stat. Comput., 18 (2008), pp. 343–373.
    • (2008) Stat. Comput , vol.18 , pp. 343-373
    • Andrieu, C.1    Thoms, J.2
  • 3
    • 77956781377 scopus 로고    scopus 로고
    • Estimates of the annual net carbon and water exchange of forests: The EUROFLUX methodology
    • M. Aubinet, A. Grelle, A. Ibrom, Ü. Rannik, J. Moncrieff, T. Foken, A. S. Kowalski, et al., Estimates of the annual net carbon and water exchange of forests: The EUROFLUX methodology, Adv. Ecol. Res., 30 (1999), pp. 113–175.
    • (1999) Adv. Ecol. Res , vol.30 , pp. 113-175
    • Aubinet, M.1    Grelle, A.2    Ibrom, A.3    Rannik, Ü.4    Moncrieff, J.5    Foken, T.6    Kowalski, A. S.7
  • 4
    • 0037995440 scopus 로고    scopus 로고
    • Assessing the eddy covariance technique for evaluating carbon dioxide exchange rates of ecosystems: Past, present and future
    • D. D. Baldocchi, Assessing the eddy covariance technique for evaluating carbon dioxide exchange rates of ecosystems: Past, present and future, Global Change Biol., 9 (2003), pp. 479–492.
    • (2003) Global Change Biol , vol.9 , pp. 479-492
    • Baldocchi, D. D.1
  • 5
    • 34147165083 scopus 로고    scopus 로고
    • An effective screening design for sensitivity analysis of large models
    • F. Campolongo, J. Cariboni, and A. Saltelli, An effective screening design for sensitivity analysis of large models, Environ. Model. Softw., 22 (2007), pp. 1509–1518.
    • (2007) Environ. Model. Softw , vol.22 , pp. 1509-1518
    • Campolongo, F.1    Cariboni, J.2    Saltelli, A.3
  • 6
    • 84866540119 scopus 로고    scopus 로고
    • Soil water availability strongly modulates soil CO2 efflux in different Mediterranean ecosystems: Model calibration using the Bayesian approach
    • A. C. Correia, F. Minunno, M. C. Caldeira, J. Banza, J. Mateus, M. Carneiro, L. Wingate, et al., Soil water availability strongly modulates soil CO2 efflux in different Mediterranean ecosystems: Model calibration using the Bayesian approach, Agr. Ecosyst. Environ., 161 (2012), pp. 88–100.
    • (2012) Agr. Ecosyst. Environ , vol.161 , pp. 88-100
    • Correia, A. C.1    Minunno, F.2    Caldeira, M. C.3    Banza, J.4    Mateus, J.5    Carneiro, M.6    Wingate, L.7
  • 7
    • 84953649167 scopus 로고
    • Study of the sensitivity of coupled reaction systems to uncertainties in rate coefficients. I. Theory
    • R. I. Cukier, C. M. Fortuin, K. E. Shuler, A. G. Petschek, and J. H. Schaibly, Study of the sensitivity of coupled reaction systems to uncertainties in rate coefficients. I. Theory, J. Chem. Phys., 59 (1973), pp. 3873–3878.
    • (1973) J. Chem. Phys , vol.59 , pp. 3873-3878
    • Cukier, R. I.1    Fortuin, C. M.2    Shuler, K. E.3    Petschek, A. G.4    Schaibly, J. H.5
  • 8
    • 84878753843 scopus 로고    scopus 로고
    • Bayes’ theorem in the 21st century
    • B. Efron, Bayes’ theorem in the 21st century, Science, 340 (2013), pp. 1177–1178.
    • (2013) Science , vol.340 , pp. 1177-1178
    • Efron, B.1
  • 9
    • 2342650272 scopus 로고    scopus 로고
    • Understanding 3-PG using a sensitivity analysis
    • L. J. Esprey, P. J. Sands, and C. W. Smith, Understanding 3-PG using a sensitivity analysis, For. Ecol. Manage., 193 (2004), pp. 235–250.
    • (2004) For. Ecol. Manage , vol.193 , pp. 235-250
    • Esprey, L. J.1    Sands, P. J.2    Smith, C. W.3
  • 11
    • 84972492387 scopus 로고
    • Inference from iterative simulation using multiple sequences
    • A. Gelman and D. B. Rubin, Inference from iterative simulation using multiple sequences, Statist. Sci., 7 (1992), pp. 457–511.
    • (1992) Statist. Sci , vol.7 , pp. 457-511
    • Gelman, A.1    Rubin, D. B.2
  • 12
    • 43149113216 scopus 로고    scopus 로고
    • Is partial-dimension convergence a problem for inferences from MCMC algorithms?
    • J. Gill, Is partial-dimension convergence a problem for inferences from MCMC algorithms?, Polit. Anal., 16 (2008), pp. 153–178.
    • (2008) Polit. Anal , vol.16 , pp. 153-178
    • Gill, J.1
  • 14
    • 0000107975 scopus 로고
    • Relations between two sets of variates
    • H. Hotelling, Relations between two sets of variates, Biometrika, 28 (1936), pp. 321–377.
    • (1936) Biometrika , vol.28 , pp. 321-377
    • Hotelling, H.1
  • 15
    • 0035138601 scopus 로고    scopus 로고
    • Process models as tools in forestry research and management
    • K. Johnsen, L. Samuelson, R. Teskey, S. McNulty, and T. Fox, Process models as tools in forestry research and management, Forest Sci., 47 (2001), pp. 2–8.
    • (2001) Forest Sci , vol.47 , pp. 2-8
    • Johnsen, K.1    Samuelson, L.2    Teskey, R.3    McNulty, S.4    Fox, T.5
  • 16
    • 0344267657 scopus 로고    scopus 로고
    • Long-term agricultural field experiments in Northern Europe: Analysis of the influence of management on soil carbon stocks using the ICBM model
    • T. Kätterer and O. Andrén, Long-term agricultural field experiments in Northern Europe: Analysis of the influence of management on soil carbon stocks using the ICBM model, Agr. Ecosyst. Environ., 72 (1999), pp. 165–179.
    • (1999) Agr. Ecosyst. Environ , vol.72 , pp. 165-179
    • Kätterer, T.1    Andrén, O.2
  • 17
    • 0035915594 scopus 로고    scopus 로고
    • The ICBM family of analytically solved models of soil carbon, nitrogen and microbial biomass dynamics—Descriptions and application examples
    • T. Kätterer and O. Andrén, The ICBM family of analytically solved models of soil carbon, nitrogen and microbial biomass dynamics—Descriptions and application examples, Ecol. Model., 136 (2001), pp. 191–207.
    • (2001) Ecol. Model , vol.136 , pp. 191-207
    • Kätterer, T.1    Andrén, O.2
  • 18
    • 0030767089 scopus 로고    scopus 로고
    • A generalised model of forest productivity using simplified concepts of radiation-use efficiency, carbon balance and partitioning
    • J. J. Landsberg and R. H. Waring, A generalised model of forest productivity using simplified concepts of radiation-use efficiency, carbon balance and partitioning, For. Ecol. Manage., 95 (1997), pp. 209–228.
    • (1997) For. Ecol. Manage , vol.95 , pp. 209-228
    • Landsberg, J. J.1    Waring, R. H.2
  • 20
    • 84874548641 scopus 로고    scopus 로고
    • Using a Bayesian framework and global sensitivity analysis to identify strengths and weaknesses of two process-based models differing in representation of autotrophic respiration
    • F. Minunno, M. Van Oijen, D. R. Cameron, S. Cerasoli, J. S. Pereira, and M. Tomé, Using a Bayesian framework and global sensitivity analysis to identify strengths and weaknesses of two process-based models differing in representation of autotrophic respiration, Environ. Model. Softw., 42 (2013), pp. 99–115.
    • (2013) Environ. Model. Softw , vol.42 , pp. 99-115
    • Minunno, F.1    Van Oijen, M.2    Cameron, D. R.3    Cerasoli, S.4    Pereira, J. S.5    Tomé, M.6
  • 21
    • 84952096573 scopus 로고
    • Factorial sampling plans for preliminary computational experiments
    • M. D. Morris, Factorial sampling plans for preliminary computational experiments, Technometrics, 33 (1991), pp. 161–174.
    • (1991) Technometrics , vol.33 , pp. 161-174
    • Morris, M. D.1
  • 22
    • 77649220970 scopus 로고    scopus 로고
    • Bayesian data—Model integration in plant physiological and ecosystem ecology
    • Springer, Springer-Verlag, Berlin, Heidelberg
    • K. Ogle and J. J. Barber, Bayesian data—Model integration in plant physiological and ecosystem ecology, in Progress in Botany, Springer, Springer-Verlag, Berlin, Heidelberg, 2008, pp. 281–311.
    • (2008) Progress in Botany , pp. 281-311
    • Ogle, K.1    Barber, J. J.2
  • 23
    • 34848819062 scopus 로고    scopus 로고
    • Net ecosystem carbon exchange in three contrasting Mediterranean ecosystems—The effect of drought
    • J. S. Pereira, J. A. Mateus, L. M. Aires, G. Pita, C. Pio, J. S. David, V. Andrade, et al., Net ecosystem carbon exchange in three contrasting Mediterranean ecosystems—The effect of drought, Biogeosciences, 4 (2007), pp. 791–802.
    • (2007) Biogeosciences , vol.4 , pp. 791-802
    • Pereira, J. S.1    Mateus, J. A.2    Aires, L. M.3    Pita, G.4    Pio, C.5    David, J. S.6    Andrade, V.7
  • 24
    • 27744444268 scopus 로고    scopus 로고
    • On the separation of net ecosystem exchange into assimilation and ecosystem respiration: Review and improved algorithm
    • M. Reichstein, E. Falge, D. Baldocchi, D. Papale, M. Aubinet, P. Berbigier, C. Bernhofer, et al., On the separation of net ecosystem exchange into assimilation and ecosystem respiration: Review and improved algorithm, Global Change Biol., 11 (2005), pp. 1424–1439.
    • (2005) Global Change Biol , vol.11 , pp. 1424-1439
    • Reichstein, M.1    Falge, E.2    Baldocchi, D.3    Papale, D.4    Aubinet, M.5    Berbigier, P.6    Bernhofer, C.7
  • 25
    • 0031285157 scopus 로고    scopus 로고
    • Weak convergence and optimal scaling of random walk Metropolis algorithms
    • G. O. Roberts, A. Gelman, and W. R. Gilks, Weak convergence and optimal scaling of random walk Metropolis algorithms, Ann. Appl. Probab., 7 (1997), pp. 110–120.
    • (1997) Ann. Appl. Probab , vol.7 , pp. 110-120
    • Roberts, G. O.1    Gelman, A.2    Gilks, W. R.3
  • 26
    • 70450224663 scopus 로고    scopus 로고
    • Variance based sensitivity analysis of model output. Design and estimator for the total sensitivity index
    • A. Saltelli, P. Annoni, I. Azzini, F. Campolongo, M. Ratto, and S. Tarantola, Variance based sensitivity analysis of model output. Design and estimator for the total sensitivity index, Comput. Phys. Comm., 181 (2010), pp. 259–270.
    • (2010) Comput. Phys. Comm , vol.181 , pp. 259-270
    • Saltelli, A.1    Annoni, P.2    Azzini, I.3    Campolongo, F.4    Ratto, M.5    Tarantola, S.6
  • 28
    • 0037188948 scopus 로고    scopus 로고
    • Parameterisation of 3-PG for plantation grown Eucalyptus globulus
    • P. J. Sands and J. J. Landsberg, Parameterisation of 3-PG for plantation grown Eucalyptus globulus, For. Ecol. Manage., 163 (2002), pp. 273–292.
    • (2002) For. Ecol. Manage , vol.163 , pp. 273-292
    • Sands, P. J.1    Landsberg, J. J.2
  • 30
    • 0034926426 scopus 로고    scopus 로고
    • Global sensitivity indices for nonlinear mathematical models and their Monte Carlo estimates
    • I. M. Sobol’, Global sensitivity indices for nonlinear mathematical models and their Monte Carlo estimates, Math. Comput. Simulation, 55 (2001), pp. 271–280.
    • (2001) Math. Comput. Simulation , vol.55 , pp. 271-280
    • Sobol, I. M.1
  • 32
    • 84870163680 scopus 로고    scopus 로고
    • Bayesian calibration, comparison and averaging of six forest models, using data from Scots pine stands across Europe
    • M. Van Oijen, C. Reyer, F. J. Bohn, D. R. Cameron, G. Deckmyn, M. Flechsig, S. Härkönen, et al., Bayesian calibration, comparison and averaging of six forest models, using data from Scots pine stands across Europe, For. Ecol. Manage., 289 (2013), pp. 255–268.
    • (2013) For. Ecol. Manage , vol.289 , pp. 255-268
    • Van Oijen, M.1    Reyer, C.2    Bohn, F. J.3    Cameron, D. R.4    Deckmyn, G.5    Flechsig, M.6    Härkönen, S.7
  • 33
    • 22344433424 scopus 로고    scopus 로고
    • Bayesian calibration of process-based forest models: Bridging the gap between models and data
    • M. Van Oijen, J. Rougier, and R. Smith, Bayesian calibration of process-based forest models: Bridging the gap between models and data, Tree Physiol., 25 (2005), pp. 915–927.
    • (2005) Tree Physiol , vol.25 , pp. 915-927
    • Van Oijen, M.1    Rougier, J.2    Smith, R.3
  • 34
    • 54049137554 scopus 로고    scopus 로고
    • Sensitivity and uncertainty analysis from a coupled 3-PG and soil organic matter decomposition model
    • G. Xenakis, D. Ray, and M. Mencuccini, Sensitivity and uncertainty analysis from a coupled 3-PG and soil organic matter decomposition model, Ecol. Model., 219 (2008), pp. 1–16.
    • (2008) Ecol. Model , vol.219 , pp. 1-16
    • Xenakis, G.1    Ray, D.2    Mencuccini, M.3


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