Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages

Genome Biology and Evolution

Volumn 6, Issue 12, 2014, Pages 3281-3294

  Hilty, Markus ^a,b   Wüthrich, Daniel ^a,c   Salter, Susannah J ^d   Engel, Hansjürg ^a   Campbell, Samuel ^a   Sá Leão, Raquel ^e   De Lencastre, Hermínia ^e,f   Hermans, Peter ^g   Sadowy, Ewa ^h   Turner, Paul ^i,j   Chewapreecha, Claire ^d,i   Diggle, Mathew ^k   Pluschke, Gerd ^l   McGee, Lesley ^m   Eser, Özgen Köseoʇlu ⁿ   Low, Donald E ^o   Smith Vaughan, Heidi ^p   Endimiani, Andrea ^a   Ffer, Marianne Kü ^a   Dupasquier, Mélanie ^q   Beaudoing, Emmanuel ^q   Weber, Johann ^q   Bruggmann, Rémy ^a,c   Hanage, William P ^r   Parkhill, Julian ^d   Hathaway, Lucy J ^a   Hlemann, Kathrin Mü ^a,b   Bentley, Stephen D ^d,s   more..

^a UNIVERSITY OF BERN   (Switzerland)

^b UNIVERSITY OF BERN   (Switzerland)

^c SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

^d WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^e UNIVERSITY OF LISBON   (Portugal)

^f ROCKEFELLER UNIVERSITY   (United States)

^g RADBOUD UNIVERSITY MEDICAL CENTER   (Netherlands)

^h NATIONAL MEDICINES INSTITUTE   (Poland)

ⁱ SHOKLO MALARIA RESEARCH UNIT   (Thailand)

^j UNIVERSITY OF OXFORD   (United Kingdom)

^k QUEEN S MEDICAL CENTRE   (United Kingdom)

^l UNIVERSITY OF BASEL   (Switzerland)

^m NATIONAL CENTER FOR IMMUNIZATION AND RESPIRATORY DISEASES   (United States)

ⁿ HACETTEPE UNIVERSITY   (Turkey)

^o MOUNT SINAI HOSPITAL   (Canada)

^p MENZIES SCHOOL OF HEALTH RESEARCH   (Australia)

^q UNIVERSITY OF LAUSANNE   (Switzerland)

^r HARVARD SCHOOL OF PUBLIC HEALTH   (United States)

^s UNIVERSITY OF CAMBRIDGE   (United Kingdom)

more..

Author keywords

Antibiotic nonsusceptibility; Comparative genomics; Integrative conjugative elements; Pneumococcal isolates; Whole genome sequencing

Indexed keywords

ANTIINFECTIVE AGENT; BETA LACTAM; TRANSPOSON;

BACTERIAL CAPSULE; BACTERIAL GENOME; CELL LINE; DRUG EFFECTS; EPITHELIUM CELL; GENE LOCUS; GENETICS; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; PATHOGENICITY; PHYLOGENY; SPECIES DIFFERENTIATION; STREPTOCOCCUS PNEUMONIAE; TRANSPOSON;

ANTI-BACTERIAL AGENTS; BACTERIAL CAPSULES; BETA-LACTAMS; CELL LINE; DNA TRANSPOSABLE ELEMENTS; EPITHELIAL CELLS; GENETIC LOCI; GENETIC SPECIATION; GENOME, BACTERIAL; HUMANS; PHYLOGENY; STREPTOCOCCUS PNEUMONIAE;

EID: 84933510790     PISSN: None     EISSN: 17596653     Source Type: Journal    
DOI: 10.1093/gbe/evu263     Document Type: Article

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