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Volumn 141, Issue 5, 2015, Pages 827-838

LncRNA and mRNA interaction study based on transcriptome profiles reveals potential core genes in the pathogenesis of human glioblastoma multiforme

Author keywords

Long noncoding RNA; Medical informatics; Messenger RNA; Microarray analysis

Indexed keywords

LONG UNTRANSLATED RNA; MESSENGER RNA; TRANSCRIPTOME;

EID: 84931369908     PISSN: 01715216     EISSN: 14321335     Source Type: Journal    
DOI: 10.1007/s00432-014-1861-6     Document Type: Article
Times cited : (36)

References (33)
  • 3
    • 33645221650 scopus 로고    scopus 로고
    • Gene connectivity, function, and sequence conservation: predictions from modular yeast co-expression networks
    • PID: 16515682
    • Carlson MR, Zhang B, Fang Z, Mischel PS, Horvath S, Nelson SF (2006) Gene connectivity, function, and sequence conservation: predictions from modular yeast co-expression networks. BMC Genomics 7:40
    • (2006) BMC Genomics , vol.7 , pp. 40
    • Carlson, M.R.1    Zhang, B.2    Fang, Z.3    Mischel, P.S.4    Horvath, S.5    Nelson, S.F.6
  • 4
    • 37549029793 scopus 로고    scopus 로고
    • The properties of high-dimensional data spaces: implications for exploring gene and protein expression data
    • COI: 1:CAS:528:DC%2BD2sXhsVKku73N, PID: 18097463
    • Clarke R, Ressom HW, Wang A, Xuan J, Liu MC, Gehan EA, Wang Y (2008) The properties of high-dimensional data spaces: implications for exploring gene and protein expression data. Nat Rev Cancer 8:37–49
    • (2008) Nat Rev Cancer , vol.8 , pp. 37-49
    • Clarke, R.1    Ressom, H.W.2    Wang, A.3    Xuan, J.4    Liu, M.C.5    Gehan, E.A.6    Wang, Y.7
  • 6
    • 77951897844 scopus 로고    scopus 로고
    • Distribution of FGFR2, TNRC9, MAP3K1, LSP1, and 8q24 alleles in genetically enriched breast cancer patients versus elderly tumor-free women
    • Gorodnova TV, ESh K, Yanus GA, Katanugina AS, Abysheva SN, Togo AV, Imyanitov EN (2010) Distribution of FGFR2, TNRC9, MAP3K1, LSP1, and 8q24 alleles in genetically enriched breast cancer patients versus elderly tumor-free women. Cancer Genet Cytogenet 199: 69–72
    • (2010) Cancer Genet Cytogenet , vol.199 , pp. 69-72
    • Gorodnova, T.V.1    ESh, K.2    Yanus, G.A.3    Katanugina, A.S.4    Abysheva, S.N.5    Togo, A.V.6    Imyanitov, E.N.7
  • 9
    • 84861783529 scopus 로고    scopus 로고
    • LncRNA profile of glioblastoma reveals the potential role of lncRNAs in contributing to glioblastoma pathogenesis
    • COI: 1:CAS:528:DC%2BC38XnvFelurs%3D, PID: 22446686
    • Han L, Zhang K, Shi Z, Zhang J, Zhu J, Zhu S, Zhang A, Jia Z, Wang G, Yu S, Pu P, Dong L, Kang C (2012) LncRNA profile of glioblastoma reveals the potential role of lncRNAs in contributing to glioblastoma pathogenesis. Int J Oncol 40:2004–2012
    • (2012) Int J Oncol , vol.40 , pp. 2004-2012
    • Han, L.1    Zhang, K.2    Shi, Z.3    Zhang, J.4    Zhu, J.5    Zhu, S.6    Zhang, A.7    Jia, Z.8    Wang, G.9    Yu, S.10    Pu, P.11    Dong, L.12    Kang, C.13
  • 12
    • 77956169567 scopus 로고    scopus 로고
    • Reduction of intersectin1-s induced apoptosis of human glioblastoma cells
    • COI: 1:CAS:528:DC%2BC3cXhtVKjtbrP, PID: 20493827
    • Ma Y, Wang B, Li W, Ying G, Fu L, Niu R, Gu F (2010) Reduction of intersectin1-s induced apoptosis of human glioblastoma cells. Brain Res 1351:222–228
    • (2010) Brain Res , vol.1351 , pp. 222-228
    • Ma, Y.1    Wang, B.2    Li, W.3    Ying, G.4    Fu, L.5    Niu, R.6    Gu, F.7
  • 13
    • 79955575370 scopus 로고    scopus 로고
    • Intersectin1-s is involved in migration and invasion of human glioma cells
    • COI: 1:CAS:528:DC%2BC3MXlsF2jtLk%3D, PID: 21503949
    • Ma Y, Wang B, Li W, Liu X, Wang J, Ding T, Zhang J, Ying G, Fu L, Gu F (2011) Intersectin1-s is involved in migration and invasion of human glioma cells. J Neurosci Res 89:1079–1090
    • (2011) J Neurosci Res , vol.89 , pp. 1079-1090
    • Ma, Y.1    Wang, B.2    Li, W.3    Liu, X.4    Wang, J.5    Ding, T.6    Zhang, J.7    Ying, G.8    Fu, L.9    Gu, F.10
  • 15
    • 76749108015 scopus 로고    scopus 로고
    • RNA-directed transcriptional gene silencing and activation in human cells
    • COI: 1:CAS:528:DC%2BC3cXjvVCisg%3D%3D, PID: 19943804
    • Morris KV (2009) RNA-directed transcriptional gene silencing and activation in human cells. Oligonucleotides 19:299–306
    • (2009) Oligonucleotides , vol.19 , pp. 299-306
    • Morris, K.V.1
  • 17
    • 0019493679 scopus 로고
    • Phosphorylation and dephosphorylation of carbamoyl-phosphate synthetase II complex of rat ascites hepatoma cells
    • COI: 1:CAS:528:DyaL3MXktVamsbc%3D, PID: 6115855
    • Otsuki T, Mori M, Tatibana M (1981) Phosphorylation and dephosphorylation of carbamoyl-phosphate synthetase II complex of rat ascites hepatoma cells. J Biochem 89:1367–1374
    • (1981) J Biochem , vol.89 , pp. 1367-1374
    • Otsuki, T.1    Mori, M.2    Tatibana, M.3
  • 18
    • 58049198442 scopus 로고    scopus 로고
    • Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles
    • Prieto C, Risueno A, Fontanillo C, De las Rivas J (2008) Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles. PLoS One 3: e3911
    • (2008) PLoS One , vol.e3911 , pp. 3
    • Prieto, C.1    Risueno, A.2    Fontanillo, C.3    De las Rivas, J.4
  • 21
    • 84869503510 scopus 로고    scopus 로고
    • Intersectin 1 is required for neuroblastoma tumorigenesis
    • COI: 1:CAS:528:DC%2BC38Xhs1Ogt7%2FI, PID: 22266851
    • Russo A, O’Bryan JP (2012) Intersectin 1 is required for neuroblastoma tumorigenesis. Oncogene 31:4828–4834
    • (2012) Oncogene , vol.31 , pp. 4828-4834
    • Russo, A.1    O’Bryan, J.P.2
  • 22
    • 79958724590 scopus 로고    scopus 로고
    • Regulation of sialyl Lewis antigen expression in colon cancer cells by sialidase NEU4
    • COI: 1:CAS:528:DC%2BC3MXntlOktL4%3D, PID: 21521691
    • Shiozaki K, Yamaguchi K, Takahashi K, Moriya S, Miyagi T (2011) Regulation of sialyl Lewis antigen expression in colon cancer cells by sialidase NEU4. J Biol Chem 286:21052–21061
    • (2011) J Biol Chem , vol.286 , pp. 21052-21061
    • Shiozaki, K.1    Yamaguchi, K.2    Takahashi, K.3    Moriya, S.4    Miyagi, T.5
  • 23
    • 84865314378 scopus 로고    scopus 로고
    • NEU4L sialidase overexpression promotes beta-catenin signaling in neuroblastoma cells, enhancing stem-like malignant cell growth
    • COI: 1:CAS:528:DC%2BC38XjsFGhtr4%3D, PID: 22287118
    • Tringali C, Cirillo F, Lamorte G, Papini N, Anastasia L, Lupo B, Silvestri I, Tettamanti G, Venerando B (2012) NEU4L sialidase overexpression promotes beta-catenin signaling in neuroblastoma cells, enhancing stem-like malignant cell growth. Int J Cancer 131:1768–1778
    • (2012) Int J Cancer , vol.131 , pp. 1768-1778
    • Tringali, C.1    Cirillo, F.2    Lamorte, G.3    Papini, N.4    Anastasia, L.5    Lupo, B.6    Silvestri, I.7    Tettamanti, G.8    Venerando, B.9
  • 24
    • 78651390167 scopus 로고    scopus 로고
    • Long intergenic noncoding RNAs: new links in cancer progression
    • COI: 1:CAS:528:DC%2BC3MXovF2l, PID: 21199792
    • Tsai MC, Spitale RC, Chang HY (2011) Long intergenic noncoding RNAs: new links in cancer progression. Cancer Res 71:3–7
    • (2011) Cancer Res , vol.71 , pp. 3-7
    • Tsai, M.C.1    Spitale, R.C.2    Chang, H.Y.3
  • 27
    • 0032482432 scopus 로고    scopus 로고
    • Collective dynamics of ‘small-world’ networks
    • COI: 1:CAS:528:DyaK1cXjs1Khsrk%3D, PID: 9623998
    • Watts DJ, Strogatz SH (1998) Collective dynamics of ‘small-world’ networks. Nature 393:440–442
    • (1998) Nature , vol.393 , pp. 440-442
    • Watts, D.J.1    Strogatz, S.H.2
  • 28
    • 0348143180 scopus 로고    scopus 로고
    • A random variance model for detection of differential gene expression in small microarray experiments
    • COI: 1:CAS:528:DC%2BD3sXpvVSis7k%3D, PID: 14668230
    • Wright GW, Simon RM (2003) A random variance model for detection of differential gene expression in small microarray experiments. Bioinformatics 19:2448–2455
    • (2003) Bioinformatics , vol.19 , pp. 2448-2455
    • Wright, G.W.1    Simon, R.M.2
  • 29
    • 33846675417 scopus 로고    scopus 로고
    • Down-regulation of sialidase NEU4 may contribute to invasive properties of human colon cancers
    • COI: 1:CAS:528:DC%2BD2sXis1amt7o%3D, PID: 17270019
    • Yamanami H, Shiozaki K, Wada T, Yamaguchi K, Uemura T, Kakugawa Y, Hujiya T, Miyagi T (2007) Down-regulation of sialidase NEU4 may contribute to invasive properties of human colon cancers. Cancer Sci 98:299–307
    • (2007) Cancer Sci , vol.98 , pp. 299-307
    • Yamanami, H.1    Shiozaki, K.2    Wada, T.3    Yamaguchi, K.4    Uemura, T.5    Kakugawa, Y.6    Hujiya, T.7    Miyagi, T.8
  • 30
    • 32544456277 scopus 로고    scopus 로고
    • Metastasis predictive signature profiles pre-exist in normal tissues
    • COI: 1:CAS:528:DC%2BD28XjsVyhsr8%3D, PID: 16475030
    • Yang H, Crawford N, Lukes L, Finney R, Lancaster M, Hunter KW (2005) Metastasis predictive signature profiles pre-exist in normal tissues. Clin Exp Metastasis 22:593–603
    • (2005) Clin Exp Metastasis , vol.22 , pp. 593-603
    • Yang, H.1    Crawford, N.2    Lukes, L.3    Finney, R.4    Lancaster, M.5    Hunter, K.W.6
  • 32
    • 84875833661 scopus 로고    scopus 로고
    • Downregulated MEG3 activates autophagy and increases cell proliferation in bladder cancer
    • COI: 1:CAS:528:DC%2BC3sXitVeqtbs%3D, PID: 23295831
    • Ying L, Huang Y, Chen H, Wang Y, Xia L, Chen Y, Liu Y, Qiu F (2013) Downregulated MEG3 activates autophagy and increases cell proliferation in bladder cancer. Mol BioSyst 9:407–411
    • (2013) Mol BioSyst , vol.9 , pp. 407-411
    • Ying, L.1    Huang, Y.2    Chen, H.3    Wang, Y.4    Xia, L.5    Chen, Y.6    Liu, Y.7    Qiu, F.8
  • 33
    • 84861156701 scopus 로고    scopus 로고
    • MEG3 noncoding RNA: a tumor suppressor
    • COI: 1:CAS:528:DC%2BC38XovFamtLk%3D, PID: 22393162
    • Zhou Y, Zhang X, Klibanski A (2012) MEG3 noncoding RNA: a tumor suppressor. J Mol Endocrinol 48:R45–R53
    • (2012) J Mol Endocrinol , vol.48 , pp. R45-R53
    • Zhou, Y.1    Zhang, X.2    Klibanski, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.