Autochthonous bioaugmentation to enhance phenanthrene degradation in soil microcosms under arid conditions

International Journal of Environmental Science and Technology

Volumn 12, Issue 7, 2015, Pages 2317-2326

  Madueno L ^a   Alvarez, H M ^b   Morelli, I S ^a,c  

^a Universidad Nacional de La Plata   (Argentina)

^b UNIVERSIDAD NACIONAL DE LA PATAGONIA SAN JUAN BOSCO   (Argentina)

^c Centro Científico y Tecnológico Consejo Nacional de Investigaciones Científicas y Técnicas   (Argentina)

Author keywords

Autochthonus bioaugmentation; Patagonian soil; Polycyclic aromatic hydrocarbons; Sphingobium

Indexed keywords

ANTHRACENE; AROMATIC COMPOUNDS; AROMATIC HYDROCARBONS; BIODEGRADATION; BIOREMEDIATION; ELECTROPHORESIS; HYDROCARBONS; MICROBIOLOGY; MICROORGANISMS; RNA; SOIL MOISTURE; SOILS;

BIO-AUGMENTATION; DEHYDROGENASE ACTIVITY; DENATURING GRADIENTS; PHENANTHRENE CONCENTRATION; POLYCYCLIC AROMATIC HYDROCARBON (PAH); SOIL MICROBIAL COMMUNITY; SPHINGOBIUM; STIMULATORY EFFECTS;

POLYCYCLIC AROMATIC HYDROCARBONS;

ARID ENVIRONMENT; AUTOCHTHON; BIODEGRADATION; BIOREMEDIATION; CONCENTRATION (COMPOSITION); ENZYME ACTIVITY; MICROBIAL COMMUNITY; MICROCOSM; PAH; PHENANTHRENE; SOIL MICROORGANISM; SOIL MOISTURE;

PATAGONIA;

SPHINGOBIUM;

EID: 84930960496     PISSN: 17351472     EISSN: 17352630     Source Type: Journal    
DOI: 10.1007/s13762-014-0637-5     Document Type: Article

References (32)

1. Barriuso J, Solano BR, Santamaria C, Daza A, Manero FJG (2008) Effect of inoculation with putative plant growth-promoting rhizobacteria isolated from Pinus spp. on Pinus pinea growth, mycorrhization and rhizosphere microbial communities. J Appl Microbiol 105:1298–1309
2. Chowdhury N, Marschner P, Burns RG (2011) Soil microbial activity and community composition: impact of changes in matric and osmotic potential. Soil Biol Biochem 43:1229–1236
3. Commendatore MG, Nievas ML, Amin O, Esteves JL (2012) Sources and distribution of aliphatic and polyaromatic hydrocarbons in coastal sediments from the Ushuaia Bay (Tierra del Fuego, Patagonia, Argentina). Mar Environ Res 74:20–31
4. Coppotelli BM, Ibarrolaza A, Del Panno MT, Morelli IS (2008) Effects of the inoculant strain Sphingomonas paucimobilis 20006FA on soil bacterial community biodegradation in phenanthrene-contaminated soil. Microb Ecol 55:173–183
5. Coppotelli BM, Ibarrolaza A, Dias RL, Del Panno MT, Berthe-Corti L, Morelli IS (2010) Study of the degradation activity and the strategies to promote the bioavailability of phenanthrene by Sphingomonas paucimobilis strain 20006FA. Microb Ecol 59:266–276
6. De Araujo JC, Schneider RP (2008) DGGE with genomic DNA: suitable for detection of numerically important organisms but not for identification of the most abundant organisms. Water Res 42:5002–5010
7. Del Panno MT, Morelli IS, Engelen B, Berthe-Corti L (2005) Effect of petrochemical sludge concentrations on microbial communities during soil bioremediation. FEMS Microbiol Ecol 53:305–316
8. Fromin N, Hamelin J, Tarnawski S, Roesti D, Jourdain-Miserez K, Forestier N, Teyssier-Cuvelle S, Gillet F, Aragno M, Rossi P (2002) Statistical analysis of denaturing gel electrophoresis (DGGE) fingerprinting patterns. Environ Microbiol 4:634–643
9. Gomes N, Kosheleva I, Abraham W, Smalla K (2005) Effects of the inoculant strain Pseudomonas putida KT2442 (pNF142) and naphthalene contamination on the soil bacterial community. FEMS Microbiol Ecol 54:21–33
10. Grosser RJ, Warshawsky D, Vestal JR (1991) Indigenous and enhanced mineralization of pyrene, benzo[a]pyrene, and carbazole in soils. Appl Environ Microbiol 57:3462–3469
11. Holman HY, Tsang YW (1995) Influence of soil moisture on biodegradation of petroleum hydrocarbons. In: Hinchee RE, Miller RN, Johnson PC (eds) In situ aeration: air sparging, bioventing, and related remediation processes. Battelle, Colombus, pp 323–332
12. Hosokawa R, Nagai M, Morikawa M, Okuyama H (2009) Autochthonous bioaugmentation and its possible application to oil spills. World J Microbiol Biotechnol 25:1519–1528
13. Ibarrolaza A, Coppotelli BM, Del Panno MT, Donati ER, Morelli IS (2011) Application of the knowledge-based approach to strain selection for a bioaugmentation process of phenanthrene and Cr(VI)-contaminated soil. J Appl Microbiol 111:26–35
14. Ilstedt U, Nordgren A, Malmer A (2000) Optimum soil water for soil respiration before and after amendment with glucose in humid tropical acrisols and a boreal mor layer. Soil Biol Biochem 32:1591–1599
15. Ma L, Zhang J, Han L, Li W, Xu L, Hu F, Li H (2012) The effects of aging time on the fraction distribution and bioavailability of PAH. Chemosphere 86:1072–1078
16. Madueño L, Coppotelli BM, Alvarez HM, Morelli IS (2011) Isolation and characterization of indigenous soil bacteria for bioaugmentation of PAH contaminated soil of semiarid Patagonia, Argentina. Int Biodeterior Biodegrad 65:345–351
17. Muyzer G, Brinkhoff T, Nubel U, Santegoeds C, Schafer H, Wawer C (2004) Denaturing gradient gel electrophoresis (DGGE) in microbial ecology. In: Kowalchuk GA, De Bruijn FJ, Head IM, Akkermans ADL, Van Elsas JD (eds) Molecular microbial ecology manual, 2nd edn. Springer, Netherlands, pp 743–769
18. Nikolopoulou M, Pasadakis N, Kalogerakis N (2013) Evaluation of autochthonous bioaugmentation and biostimulation during microcosm-simulated oil spills. Mar Pollut Bull 72:165–173
19. Paruelo NR, Beltran A, Jobbagy E, Sala OE, Golluscio RA (1998) The climate of Patagonia: general patterns and controls on biotic processes. Ecol Austral 8:85–101
20. Peressutti SR, Alvarez HM, Pucci OH (2003) Dynamics of hydrocarbon-degrading bacteriocenosis of an experimental oil pollution in Patagonian soil. Int Biodeterior Biodegrad 52:21–30
21. Prieto LH, Bertiller MB, Carrera AL, Olivera NL (2011) Soil enzyme and microbial activities in a grazing ecosystem of Patagonian Monte, Argentina. Geoderma 162:281–287
22. Reasoner DJ, Geldreich EE (1985) A new medium for the enumeration and subculture of bacteria from potable water. Appl Environ Microbiol 49:1–7
23. Sokal RR, Michener CD (1958) A statistical method for evaluating systematic relationships. Univ Kans Sci Bull 38:1409–1438
24. Thalman A (1968) Zur Methodik der bestimmung der ehy- drogenaseaktivita¨t im boden mittels triphenyltetra- zoliumchlorid (TTC). Landwirtsch Forsch 21:249–258
25. Tibbett M, George SJ, Davie A, Barron A, Milton N, Greenwood PF (2011) Just add water and salt: the optimisation of petrogenic hydrocarbon biodegradation in soils from semi-arid barrow island, Western Australia. Water Air Soil Pollut 216:513–525
26. Treves DS, Xia B, Zhou J, Tiedje JM (2003) A two-species test of the hypothesis that spatial isolation influences microbial diversity in soil. Microb Ecol 45:20–28
27. Ueno A, Ito Y, Yumoto I, Okuyama H (2007) Isolation and characterization of bacteria from soil contaminated with diesel oil and the possible use of these in autochthonous bioaugmentation. World J Microb Biotechnol 23:1739–1745
28. Viñas M, Sabate J, Espuny MJ, Anna M, Vin M (2005) Bacterial community dynamics and polycyclic aromatic hydrocarbon degradation during bioremediation of heavily creosote-contaminated soil. Appl Environ Microbiol 71:7008–7018
29. Vogel TM (1996) Bioaugmentation as a soil bioremediation approach. Curr Opin Biotechnol 7:311–316
30. Wichern J, Wichern F, Joergensen RG (2006) Impact of salinity on soil microbial communities and the decomposition of maize in acidic soils. Geoderma 137:100–108
31. Wrenn BA, Venosa AD (1996) Selective enumeration of aromatic and aliphatic hydrocarbon degrading bacteria by a most-probable-number procedure. Can J Microbiol 42:252–258
32. Yang SZ, Jin HJ, Wei Z, He RX, Ji YJ, Li XM (2009) Bioremediation of oil spills in cold environments: a review. Pedosphere 19:371–381