Effect of petrochemical sludge concentrations on microbial communities during soil bioremediation

FEMS Microbiology Ecology

Volumn 53, Issue 2, 2005, Pages 305-316

  Del Panno, María T ^a   Morelli, Irma S ^a   Engelen, Bert ^b   Berthe Corti, Luise ^b  

^a FACULTAD DE CIENCIAS EXACTAS   (Argentina)

^b UNIVERSITY OF OLDENBURG   (Germany)

Author keywords

Bioremediation; Hydrocarbon degradation; Soil bacterial community

Indexed keywords

OXIDOREDUCTASE; POLYCYCLIC AROMATIC HYDROCARBON;

BIOREMEDIATION; MICROBIAL COMMUNITY; SOIL REMEDIATION;

ANALYTIC METHOD; ARTICLE; BACTERIUM; BIOREMEDIATION; CHEMICAL ANALYSIS; CHEMICAL COMPOSITION; COLONY FORMING UNIT; COMMUNITY STRUCTURE; COMPARATIVE STUDY; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; DENATURING GRADIENT GEL ELECTROPHORESIS; ENZYME ACTIVITY; EXTRACTION; MICROCOSM; MICROFLORA; NONHUMAN; PRIORITY JOURNAL; SLUDGE; SOIL POLLUTION; STATISTICAL SIGNIFICANCE; SUBSTRATE INDUCED RESPIRATION;

BIODEGRADATION, ENVIRONMENTAL; HYDROCARBONS; OXIDOREDUCTASES; PETROLEUM; POPULATION DYNAMICS; REFUSE DISPOSAL; SOIL MICROBIOLOGY; SOIL POLLUTANTS;

EID: 20444379632     PISSN: 01686496     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsec.2005.01.014     Document Type: Article

References (38)

1. G.C. Barbee, K.W. Brown, and K.C. Donnelly Fate of mutagenic chemicals in soil amended with petroleum and wood preserving sludges Waste Manag. Res. 10 1992 73 85
2. S. Mishra, J. Jyot, R.C. Kuhad, and B. Lal Evaluation of inoculum addition to stimulate in situ bioremediation of oily-sludge-contaminated soil Appl. Environ. Microbiol. 67 2001 1675 1681
3. W.F. Ritter, and R.W. Scarborough A review of bioremediation of contaminated soils and groundwater J. Environ. Sci. Health Part A Tox. Hazard. Subst. Environ. Eng. A 30 1995 333 357
4. B. Engelen, K. Meinken, F von Wintzingerode, H. Heuer, H. Malkomes, and H. Backhaus Monitoring impact of a pesticide treatment on bacterial soil communities by metabolic and genetic fingerprinting in addition to conventional testing procedures Appl. Environ. Microbiol. 64 1998 2814 2821
5. S.J. MacNaughton, J.R. Stephen, A.D. Venosa, G.A. Davis, Y. Chang, and D.C. White Microbial population changes during bioremediation of an experimental oil spill Appl. Environ. Microbiol. 65 1999 3566 3574
6. D. Juck, B.T. Driscoll, T.C. Charles, and C.W. Greer Effect of experimental contamination with the explosive hexahydro-1,3,5-triazine on soil bacterial communities FEMS Microbiol. Ecol. 43 2003 255 262
7. T. Iwamoto, and M. Nasu Current bioremediation practice and perspective J. Biosci. Bioeng. 92 2001 1 8
8. K. Watanabe, and P.W. Baker Environmentally relevant microorganisms J. Biosci. Bioeng. 89 2000 1 11
9. T. Barkay, D.F. Shearer, and B.H. Olson Toxicity testing in soil using microorganisms B.J. Dutka G. Bitton Toxicity testing using microorganisms vol. 2 1986 CRC Press Boca Raton, FL 133 155
10. E. Witter, P. Gong, E. Bååth, and H. Marstorp A study of the structure and metal tolerance of the soil microbial community six years after cessation of sewage sludge applications Environ. Toxicol. Chem. 19 2000 1983 1991
11. M. Remmler, F.D. Kopinke, and U. Stottmeister Thermoanalytical methods for characterizing hydrocarbon-sludge-soil mixtures Thermochim. Acta 263 1995 101 112
12. G.I. Vecchioli, O.R. Costanza, S.A. Giorgieri, and M. Remmler Extent of cleaning achievable by bioremediation of soil contaminated with petrochemical sludges J. Chem. Technol. Biotechnol. 70 1997 331 336
13. D. Pramer, and R. Bartha Preparation and processing of soil samples for biodegradation studies Environ. Lett. 2 1972 217 224
14. H.G. Song, X. Wang, and R. Bartha Bioremediation potential of terrestrial fuel spills Appl. Environ. Microbiol. 56 1990 652 656
15. D.J. Reasoner, and E.E. Geldreich A new medium for the enumeration and subculture of bacteria from potable water Appl. Environ. Microbiol. 49 1985 1 7
16. H.G. Song, and R. Bartha Effects of jet fuel spills on the microbial community of soil Appl. Environ. Microbiol. 56 1990 646 651
17. G.I. Vecchioli, M.T. Del Panno, and M.T. Painceira Use of selected autochthonous soil bacteria to enhance degradation of hydrocarbons in soil Environ. Pollut. 67 1990 249 258
18. P.M.R. Gerhard, R. Costilow, E. Nester, N. Krieg, and G. Phillips Manual of methods for general bacteriology 1981 American Society of Microbiology Washington, DC p. 524
19. I. Kuehn, G. Allestam, T.A. Stenstroem, and R. Moellby Biochemical fingerprinting of water coliform bacteria, a new method for measuring phenotypic diversity and for comparing different bacterial populations Appl. Environ. Microbiol. 57 1991 3171 3177
20. R.R. Sokal, and C.D. Michener A statistical method for evaluating systematic relationships Univ. Kansas Sci. Bull. 38 1958 1409 1438
21. C.R. Kuske, S.M. Barns, and J.D. Busch Diverse uncultivated bacterial groups from soils of the arid southwestern United States that are present in many geographic regions Appl. Environ. Microbiol. 63 1997 3614 3621
22. G. Muyzer, T. Brinkhoff, U. Nübel, C. Santegoedes, H. Schäfer, and C. Wawer Denaturing gradient gel electrophoresis (DGGE) in microbial ecology A.D.L. Akkermanns J.D. van Elsas F. de Bruijn Molecular microbial ecology manual 1998 Kluwer Academic Press Dordrecht 1 27
23. K. Pearson On the coefficient of racial likeliness Biometrika 18 1926 105 117
24. S.F. Altschul, T.L. Madden, A.A. Schäffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
25. A. Thalmann Zur Methodik der Bestimmung der Dehydrogenaseaktivität im Boden mittels Triphenyletetrazoliumchlorid (TTC) Landwirtsch. Forsch. 21 1968 249 258
26. G.M. Garrity Bergey's Manual of Systematic Bacteriology 2005 Springer New York
27. R. Bartha, and D. Pramer Features of a flask and method for measuring the persistence and biological effects of pesticide in soil Soil Sci. 100 1965 68 70
28. A. Nordgren, E. Bååth, and B. Söderström Evaluation of soil respiration characteristics to assess heavy metal effects on soil microorganisms using glutamic acid as a substrate Soil Biol. Biochem. 20 1988 949 954
29. R.C. Loehr, J.H.J. Martin, and E.F. Neuhauser Land treatment of an aged oily sludge - organic loss and change in soil characteristics Wat. Res. 26 1992 805 815
30. B.P. Degens, and J.A. Harris Development of a physiological approach to measuring the catabolic diversity of soil microbial communities Soil Biol. Biochem. 29 1997 1309 1320
31. M. Zucchi, L. Angiolini, S. Borin, L. Brusetti, N. Dietrich, C. Gigliotti, P. Barbieri, C. Sorlini, and D. Daffonchio Response of bacterial community during bioremediation of an oil-polluted soil J. Appl. Microbiol. 94 2003 248 257
32. D.Y. Sorokin, T.P. Tourova, A.M. Lysenko, and J.G. Kuenen Microbial thiocyanate utilization under highly alkaline conditions Appl. Environ. Microbiol. 67 2 2001 528 538
33. D. Di Gioia, C. Barberio, S. Spagnesi, L. Marchetti, and F. Fava Characterization of four olive-mill-wastewater indigenous bacterial strains capable of aerobically degrading hydroxylated and methoxylated monocyclic aromatic compounds Arch. Microbiol. 178 3 2002 208 217
34. M.T. Suzuki, and S.J. Giovannoni Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR Appl. Environ. Microbiol. 62 1996 625 630
35. F. von Wintzingerode, U.B. Gobel, and E. Stackebrandt Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis FEMS Microbiol. Rev. 21 1997 213 229
36. A.E. Murray, J.T. Hollibaugh, and C. Orrego Phylogenetic compositions of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments Appl. Environ. Microbiol. 62 1996 2676 2680
37. R.M. Atlas Petroleum microbiology 1984 Macmillan Publishing Company New York p. 692
38. I.S. Morelli, G.I. Vecchioli, M.T. Del Panno, and M.T. Painceira Effect of petrochemical sludge concentrations on changes in mutagenic activity during soil bioremediation process Environ. Toxicol. Chem. 20 2001 2179 2183