-
1
-
-
33645226631
-
Genomic organization and molecular characterization of Clostridium difficile bacteriophage phi cd119
-
Govind, R.; Fralick, J.; Rolfe, R. Genomic organization and molecular characterization of Clostridium difficile bacteriophage phi cd119. J. Bacteriol. 2006, 188, 2568-2577.
-
(2006)
J. Bacteriol
, vol.188
, pp. 2568-2577
-
-
Govind, R.1
Fralick, J.2
Rolfe, R.3
-
2
-
-
33947403984
-
The complete genome sequence of Clostridium difficile phage phiC2 and comparisons to phiCD119 and inducible prophages of CD630
-
Goh, S.; Ong, P.; Song, K.; Riley, T.; Chang, B. The complete genome sequence of Clostridium difficile phage phiC2 and comparisons to phiCD119 and inducible prophages of CD630. Microbiology 2007, 153, 676-685.
-
(2007)
Microbiology
, vol.153
, pp. 676-685
-
-
Goh, S.1
Ong, P.2
Song, K.3
Riley, T.4
Chang, B.5
-
3
-
-
53849135601
-
Gasson, M. Molecular characterization of a Clostridium difficile bacteriophage and its cloned biologically active endolysin
-
Mayer, M.; Narbad, A.; Gasson, M. Molecular characterization of a Clostridium difficile bacteriophage and its cloned biologically active endolysin. J. Bacteriol. 2008, 190, 6734-6740.
-
(2008)
J. Bacteriol
, vol.190
, pp. 6734-6740
-
-
Mayer, M.1
Narbad, A.2
-
4
-
-
77954213225
-
Genome analysis of the Clostridium difficile phage phiCD6356, a temperate phage of the siphoviridae family
-
Horgan, M.; O'Sullivan, O.; Coffey, A.; Fitzgerald, G.; van Sinderen, D.; McAuliffe, O.; Ross, R. Genome analysis of the Clostridium difficile phage phiCD6356, a temperate phage of the siphoviridae family. Gene 2010, 462, 34-43.
-
(2010)
Gene
, vol.462
, pp. 34-43
-
-
Horgan, M.1
O'sullivan, O.2
Coffey, A.3
Fitzgerald, G.4
Van Sinderen, D.5
McAuliffe, O.6
Ross, R.7
-
5
-
-
79958160416
-
Prophage-stimulated toxin production in Clostridium difficile NAP1/027 lysogens
-
Sekulovic, O.; Meessen-Pinard, M.; Fortier, L. Prophage-stimulated toxin production in Clostridium difficile NAP1/027 lysogens. J. Bacteriol. 2011, 193, 2726-2734.
-
(2011)
J. Bacteriol
, vol.193
, pp. 2726-2734
-
-
Sekulovic, O.1
Meessen-Pinard, M.2
Fortier, L.3
-
6
-
-
84868623569
-
Evidence of in vivo prophage induction during Clostridium difficile infection. Appl. Environ
-
Meessen-Pinard, M.; Sekulovic, O.; Fortier, L. Evidence of in vivo prophage induction during Clostridium difficile infection. Appl. Environ. Microbiol. 2012, 78, 7662-7670.
-
(2012)
Microbiol
, vol.78
, pp. 7662-7670
-
-
Meessen-Pinard, M.1
Sekulovic, O.2
Fortier, L.3
-
7
-
-
84899692742
-
What does the talking? Quorum sensing signalling genes discovered in a bacteriophage genome
-
Hargreaves, K.R.; Kropinski, A.M.; Clokie, M.R.J. What does the talking? Quorum sensing signalling genes discovered in a bacteriophage genome. PLoS ONE 2014, 9, e85131.
-
(2014)
Plos ONE
, vol.9
-
-
Hargreaves, K.R.1
Kropinski, A.M.2
Clokie, M.3
-
8
-
-
84908432854
-
Abundant and diverse clustered regularly interspaced short palindromic repeat spacers in Clostridium difficile strains and prophages target multiple phage types within this pathogen
-
Hargreaves, K.R.; Flores, C.O.; Lawley, T.D.; Clokie, M.R.J. Abundant and diverse clustered regularly interspaced short palindromic repeat spacers in Clostridium difficile strains and prophages target multiple phage types within this pathogen. MBio 2014, 5, e01045-e01113.
-
(2014)
Mbio
, vol.5
-
-
Hargreaves, K.R.1
Flores, C.O.2
Lawley, T.D.3
Clokie, M.4
-
9
-
-
84899684470
-
Clostridium difficile phages: Still difficult? Front
-
Hargreaves, K.R.; Clokie, M.R.J. Clostridium difficile phages: Still difficult? Front. Microbiol. 2014, 5, e184.
-
(2014)
Microbiol
, vol.5
-
-
Hargreaves, K.R.1
Clokie, M.2
-
10
-
-
70449380104
-
Classification of myoviridae bacteriophages using protein sequence similarity
-
Lavigne, R.; Darius, P.; Summer, E.J.; Seto, D.; Mahadevan, P.; Nilsson, A.S.; Ackermann, H.W.; Kropinski, A.M. Classification of myoviridae bacteriophages using protein sequence similarity. BMC Microbiol. 2009, 9, e224.
-
(2009)
BMC Microbiol
, vol.9
-
-
Lavigne, R.1
Darius, P.2
Summer, E.J.3
Seto, D.4
Mahadevan, P.5
Nilsson, A.S.6
Ackermann, H.W.7
Kropinski, A.M.8
-
11
-
-
15544369054
-
Effect of phage infection on toxin production by Clostridium difficile
-
Goh, S.; Chang, B.; Riley, T. Effect of phage infection on toxin production by Clostridium difficile. J. Med. Microbiol. 2005, 54, 129-135.
-
(2005)
J. Med. Microbiol
, vol.54
, pp. 129-135
-
-
Goh, S.1
Chang, B.2
Riley, T.3
-
12
-
-
78650574888
-
Bacteriophage treatment significantly reduces viable Clostridium difficile and prevents toxin production in an in vitro model system
-
Meader, E.; Mayer, M.; Gasson, M.; Steverding, D.; Carding, S.; Narbad, A. Bacteriophage treatment significantly reduces viable Clostridium difficile and prevents toxin production in an in vitro model system. Anaerobe 2010, 16, 549-554.
-
(2010)
Anaerobe
, vol.16
, pp. 549-554
-
-
Meader, E.1
Mayer, M.2
Gasson, M.3
Steverding, D.4
Carding, S.5
Narbad, A.6
-
13
-
-
84891648569
-
Phage C2 mediates transduction of tn6215, encoding erythromycin resistance, between Clostridium difficile strains
-
Goh, S.; Hussain, H.; Chang, B.J.; Emmett, W.; Riley, T.V.; Mullany, P. Phage C2 mediates transduction of tn6215, encoding erythromycin resistance, between Clostridium difficile strains. MBio 2013, 4, e00840-13.
-
(2013)
Mbio
, vol.4
-
-
Goh, S.1
Hussain, H.2
Chang, B.J.3
Emmett, W.4
Riley, T.V.5
Mullany, P.6
-
14
-
-
80053609598
-
Structure-based modification of a Clostridium difficile-targeting endolysin affects activity and host range
-
Mayer, M.; Garefalaki, V.; Spoerl, R.; Narbad, A.; Meijers, R. Structure-based modification of a Clostridium difficile-targeting endolysin affects activity and host range. J. Bacteriol. 2011, 193, 5477-5486.
-
(2011)
J. Bacteriol
, vol.193
, pp. 5477-5486
-
-
Mayer, M.1
Garefalaki, V.2
Spoerl, R.3
Narbad, A.4
Meijers, R.5
-
15
-
-
0022376704
-
Dating the human-ape split by a molecular clock of mitochondrial DNA
-
Hasegawa, M.; Kishino, H.; Yano, T. Dating the human-ape split by a molecular clock of mitochondrial DNA. J. Mol. Evol. 1985, 22, 160-174.
-
(1985)
J. Mol. Evol
, vol.22
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
16
-
-
84896992962
-
Fortier, L.-C. Characterization of temperate phages infecting Clostridium difficile isolates from human and animal origin
-
Sekulovic, O.; Garneau, J.R.; Néron, A.; Fortier, L.-C. Characterization of temperate phages infecting Clostridium difficile isolates from human and animal origin. Appl. Environ. Microbiol 2014, 80, 2555-2563.
-
(2014)
Appl. Environ. Microbiol
, vol.80
, pp. 2555-2563
-
-
Sekulovic, O.1
Garneau, J.R.2
Néron, A.3
-
17
-
-
0035856287
-
The bacterial para-parb partitioning proteins
-
Bignell, C.; Thomas, C.M. The bacterial para-parb partitioning proteins. J. Biotechnol. 2001, 91, 1-34.
-
(2001)
J. Biotechnol
, vol.91
, pp. 1-34
-
-
Bignell, C.1
Thomas, C.M.2
-
18
-
-
0033635022
-
Artemis: Sequence visualization and annotation
-
Rutherford, K.; Parkhill, J.; Crook, J.; Horsnell, T.; Rice, P.; Rajandream, M.A.; Barrell, B. Artemis: Sequence visualization and annotation. Bioinformatics 2000, 16, 944-945.
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
Barrell, B.7
-
19
-
-
33745634395
-
Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
-
Li, W.; Godzik, A. Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 2006, 22, 1658-1659.
-
(2006)
Bioinformatics
, vol.22
, pp. 1658-1659
-
-
Li, W.1
Godzik, A.2
-
20
-
-
84870431038
-
Cd-hit: Accelerated for clustering the next-generation sequencing data
-
Fu, L.; Niu, B.; Zhu, Z.; Wu, S.; Li, W. Cd-hit: Accelerated for clustering the next-generation sequencing data. Bioinformatics 2012, 28, 3150-3152.
-
(2012)
Bioinformatics
, vol.28
, pp. 3150-3152
-
-
Fu, L.1
Niu, B.2
Zhu, Z.3
Wu, S.4
Li, W.5
-
22
-
-
85017805877
-
-
http://tree.bio.ed.ac.uk/software/figtree/(accessed on 17 May 2015)
-
-
-
-
24
-
-
85017805060
-
-
https://inkscape.org/en/download/(accessed on 17 May 2015)
-
-
-
-
25
-
-
84890330527
-
Mega6: Molecular evolutionary genetics analysis version 6.0
-
Tamura, K.; Stecher, G.; Peterson, D.; Filipski, A.; Kumar, S. Mega6: Molecular evolutionary genetics analysis version 6.0. J. Mol. Evol. 2013, 30, 2725-2729.
-
(2013)
J. Mol. Evol
, vol.30
, pp. 2725-2729
-
-
Tamura, K.1
Stecher, G.2
Peterson, D.3
Filipski, A.4
Kumar, S.5
|