First genome sequence of St. Louis encephalitis virus (SLEV) isolated from a human in Brazil

Archives of Virology

Volumn 160, Issue 5, 2015, Pages 1189-1195

  Vedovello, Danila ^a   Drumond, Betânia Paiva ^b   Marques, Rafael Elias ^c   Ullmann, Leila Sabrina ^d   Fávaro, Eliane Aparecida ^a   Terzian, Ana Carolina Bernardes ^a   Figueiredo, Luiz Tadeu Moraes ^e   Teixeira, Mauro Martins ^c   Junior, João Pessoa Araújo ^d   Nogueira, Maurício Lacerda ^a  

^a Universidade Federal de Juiz de Fora ^*  (Brazil)

^b FEDERAL UNIVERSITY OF JUIZ DE FORA   (Brazil)

^c FEDERAL UNIVERSITY OF MINAS GERAIS   (Brazil)

^d SÃO PAULO STATE UNIVERSITY UNESP   (Brazil)

^e UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

BRAZIL; CASE REPORT; CLUSTER ANALYSIS; DNA SEQUENCE; FEMALE; GENETICS; GENOTYPE; HUMAN; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; PHYLOGENY; SEQUENCE HOMOLOGY; ST. LOUIS ENCEPHALITIS; ST. LOUIS ENCEPHALITIS VIRUS; VIROLOGY; VIRUS GENOME; YOUNG ADULT;

BRAZIL; CLUSTER ANALYSIS; ENCEPHALITIS VIRUS, ST. LOUIS; ENCEPHALITIS, ST. LOUIS; FEMALE; GENOME, VIRAL; GENOTYPE; HUMANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; YOUNG ADULT;

EID: 84930897254     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-015-2378-2     Document Type: Article

References (40)

1. King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (2012) Ninth report of the international committee on taxonomy of viruses. Elsevier Academic Press, San Diego
2. Rosa REA, Costa EA, Marques RE, Oliveira TS, Furtini R, Bomfim MRQ, Teixeira MM, Paixão TA, Santos RL (2012) Isolation of Saint Louis Encephalitis Virus from a Horse with Neurological Disease in Brazil. PLoS Negl Trop Dis 7(11):e2537. doi:10.1371/journal.pntd.0002537
3. Calisher CH, Karabatsos N, Dalrymple JM, Shope RE, Porterfield JS, Westaway EG, Brandt W (1989) Antigenic relationships between flaviviruses as determined by cross-neutralization tests with polyclonal antisera. J Gen Virol 70:37–43. doi:10.1099/0022-1317-70-1-37B.D
4. Lindenbach, Rice CM (2001) Flaviviridae: the viruses and their replication. In Knipe DM, Howley PM (eds) Fields virology. Lippincott-Williams and Wilkins, Philadelphia, pp 991–1041
5. Travassos da Rosa APA, Vasconcelos Travassos da Rosa JFS (1998) An overwiew of arbovirology on Brazil and neighboring countries. Instituto Evandro Chagas, Belém, pp 19–31
6. Bernard KA, Kramer LD (2001) West Nile virus activity in the United States. Viral Immunol 14:319–338
7. Figueiredo LT (2000) The Brazilian flaviviruses. Microbes Infect 2:1643–1649. doi:10.1016/S1286-4579(00)01320-4
8. Rocco IM, Santos CL, Bisordi I, Petrella SM, Pereira LE, Souza RP et al (2005) St. Louis encephalitis virus: first isolation from a human in São Paulo state, Brazil. Rev Inst Med Trop Sao Paulo 47:281–285. doi:10.1590/S0036-46652005000500008
9. Luby JP, Sulkin SE, Sanford JP (1969) The epidemiology of St. Louis encephalitis: a review. Annu Rev Med 20:329–350. doi:10.1146/annurev.me.20.020169.001553
10. Chamberlain RW (1980) History of St. Louis encephalitis. In: Monath TP (ed) St. Louis encephalitis. American Public Health Association, Washington, DC, pp 3–61
11. Monath TP, Tsai TF (1987) St. Louis encephalitis: lessons from the last decade. Am J Trop Med Hyg 37(3 Suppl):40S–59S
12. Clark DC, Brault AC, Hunsperger E (2012) The contribution of rodent models to the pathological assessment of flaviviral infections of the central nervous system. Arch Virol 157:1423–1440
13. Causey OR, Theiller M (1958) Virus antibody survey on sera of residents of the Amazon Valley in Brazil. Am J Trop Med Hyg 7:36–41
14. Spinsanti LR, Diaz VMP, Contigiani MS (2002) Age-related seroprevalence study for St. Louis encephalitis in a population from Cordoba, Argentina. Rev Inst Med Trop Sao Paulo 44:59–62
15. Mettler NE, Casals J (1971) Isolation of St. Louis encephalitis virus from man in Argentina. Acta Virol 15:148–154. doi:10.3201/eid2004.131735
16. Vasconcelos PF, Da Rosa JF, Da Rosa AP, Dégallier N, Pinheiro FP, Sá Filho GC (1919) Epidemiology of encephalitis caused by arbovirus in the Brazilian Amazonia. Rev Inst Med Trop Sao Paulo 33:465–476. doi:10.1590/S0036-46651991000600007
17. Mondini A, Cardeal IL, Lázaro E, Nunes SH, Moreira CC, Rahal P, Maia I, Franco C, Góngora DVN et al (2007) Saint Louis Encephalitis virus. Brazil. Emerg Infect Dis 13(1):176–178
18. Kramer LD, Chandler LJ (2001) Phylogenetic analysis of the envelope gene of St. Louis encephalitis virus. Arch Virol 146:2341–2355
19. Rodrigues SG, Nunes MR, Casseb SM, Prazeres AS, Rodrigues DS, Silva MO et al (2010) Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal. J Gen Virol 91(Pt 10):2420–2427. doi:10.1099/vir.0.019117-0
20. Monath T, Cropp C, Bowen G, Kemp G, Mitchell C, Gardner J (1980) Variation in virulence for mice and rhesus monkeys among St. Louis encephalitis virus strains of different origin. Am J Trop Med Hyg 29:948–962
21. Bowen G, Monath T, Kemp G, Kerschner J, Kirk L (1980) Geographic variation among St. Louis encephalitis virus strains in the viremic responses of avian hosts. Am J Trop Med Hyg 29:1411–1419
22. Pinheiro FP, LeDuc JW, Travassos da Rosa APA, Leite OF (1981) Isolation of St. Louis encephalitis virus from a patient in Belem, Brazil. Am J Trop Med Hyg 30:145–148
23. Terzian ACB, Mondini A, Bronzoni RVM, Drumond BP, Cabrera E, Figueiredo LTM, CHiaravelloti-Neto F, Nogueira ML (2011) Detection of St. Louis Encephalitis virus in dengue suspected cases during Dengue 3 outbreak. Vector Borne Zoonotic Dis 11:291–300
24. Bronzoni RVM, Baleotti FG, Nogueira RMR, Nunes N, Figueiredo LTM (2005) Duplex reverse transcription-PCR followed by nested PCR assays for detection and identification of Brazilian alphaviruses and flaviviruses. J Clin Microbiol 43(2):696–702. doi:10.1128/JCM.43.2.696-702.2005
25. Sambrook J, Russel DW (2012) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, New York
26. Baillie GL, Kolokotronis GO, Waltari E, Maffei JG, Kramer LK, Perkins SL (2008) Phylogenetic and evolutionary analyses of St. Louis encephalitis virus genomes. Mol Phylogenet Evol 47:717–728
27. Tamura K, Glen S, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Phylogenet Evol 30:2725–2729
28. Kopp A, Gillespie TR, Hobelsberger D, Estrada A, Harper JM, Miller RA, Eckerle I et al (2013) Provenance and geographic spread of St. Louis encephalitis virus. AMS 4(3):e00322–e413. doi:10.1128/mBio.00322-13
29. Auguste AJ, Pybus OG, Carrington CVF (2009) Evolution and dispersal of St. Louis encephalitis virus in the Americas. Infect Genet Evol 9:709–715
30. Valinotto ALE, Barreroa PR, Viegas M, Lópeza MCA, Mistchenkoa AS (2012) Molecular evidence of St. Louis encephalitis virus infection in patients in Buenos Aires. J Clin Virol 54:349–351. doi:10.1016/j.jcv.2012.04.00
31. Rappole JH, Derrickson SL, Hubálek Z (2000) Migratory birds and spread of West Nile virus in the Western Hemisphere. Emerg Infect Dis 6(4):319–328. doi:10.3201/eid0604.000401
32. Tompkins D, Johansen C, Jakob-Hoff R, Pulford D, Castro I, Mackereth G (2013) Surveillance for arboviral zoonoses in New Zealand birds. West Pac Surveill Response J. 4(4):16–23. doi:10.5365/WPSAR.2013.4.3.002
33. Mancini F, Toma L, Ciervo A, Di Luca M, Faggioni G, Lista F, Rezza G (2013) Virus investigation in ticks from migratory birds in Italy. New Microbiol 36(4):433–434
34. Mishra N, Kalaiyarasu S, Nagarajan S, Rao MV, George A et al (2012) Serological evidence of West Nile virus infection in wild migratory and resident water birds in Eastern and Northern India. Comp Immunol Microbiol Infect Dis 35(6):591–598. doi:10.1016/j.cimid.2012.08.002
35. Trent DW, Kinney RM, Johnson BJB, Vorndam AV, Grant JA, Deubel V, Rice CM, Hahn C (1987) Partial nucleotide sequence of St. Louis encephalitis virus RNA: structural proteins, NS1, NS2A, and NS2B. Virology 156:293–304. doi:10.1016/0042-6822(87)90409-0
36. Diaz LA, Ré V, Almirón WR, Farías A, Vásquez A, Sanchez-Seco MP et al (2006) Genotype III Saint Louis Encephalitis Outbreak, Argentina, 2005. Emerg Infect Dis 12:11
37. May FJ, Li L, Zhang S, Guzman H, Beasley DW, Tesh RB, Higgs S, Raj P, Bueno R Jr, Randle Y, Chandler L, Barrett AD (2008) Genetic variation of St. Louis encephalitis virus. J Gen Virol 89:1901–1910
38. Ottendorfer CL, Ambrose JH, White GS et al (2009) Isolation of Genotype V St. Louis Encephalitis Virus in Florida. Emerg Infect Dis 15:4
39. Dos Santos CLS, Sallum MAM, Franco HM, Oshiro FM, Rocco IM (2006) Genetic characterization of St. Louis encephalitis virus isolated from human in São Paulo, Brazil. Mem Inst Oswaldo Cruz 101(1):57–63
40. Felices V, Ampuero JS, Guevara C, Caceda ER, Gomez J, Santiago-Maldonado FW et al (2014) St. Louis encephalitis virus infection in woman, Peru. Emerg Infect Dis 20:4. doi:10.3201/eid2004.131735