-
1
-
-
84860450204
-
To the pore and through the pore: A story of mRNA export kinetics
-
Oeffinger, M. and Zenklusen, D. (2012) To the pore and through the pore: A story of mRNA export kinetics. Biochim. Biophys. Acta, 1819, 494-506.
-
(2012)
Biochim. Biophys. Acta
, vol.1819
, pp. 494-506
-
-
Oeffinger, M.1
Zenklusen, D.2
-
2
-
-
84875229872
-
How cells get the message: Dynamic assembly and function of mRNA-protein complexes
-
Muller-McNicoll, M. and Neugebauer, K.M. (2013) How cells get the message: dynamic assembly and function of mRNA-protein complexes. Nat. Rev. Genet., 14, 275-287.
-
(2013)
Nat. Rev. Genet.
, vol.14
, pp. 275-287
-
-
Muller-Mcnicoll, M.1
Neugebauer, K.M.2
-
3
-
-
84889068112
-
MRNA nuclear export in yeast
-
Nino, C.A., Herissant, L., Babour, A. and Dargemont, C. (2013) mRNA nuclear export in yeast. Chem. Rev., 113, 8523-8545.
-
(2013)
Chem. Rev.
, vol.113
, pp. 8523-8545
-
-
Nino, C.A.1
Herissant, L.2
Babour, A.3
Dargemont, C.4
-
4
-
-
84860443663
-
New clues to understand the role of THO and other functionally related factors in mRNP biogenesis
-
Luna, R., Rondon, A.G. and Aguilera, A. (2012) New clues to understand the role of THO and other functionally related factors in mRNP biogenesis. Biochim. Biophys. Acta, 1819, 514-520.
-
(2012)
Biochim. Biophys. Acta
, vol.1819
, pp. 514-520
-
-
Luna, R.1
Rondon, A.G.2
Aguilera, A.3
-
5
-
-
79957496447
-
Keeping mRNPs in check during assembly and nuclear export
-
Tutucci, E. and Stutz, F. (2011) Keeping mRNPs in check during assembly and nuclear export. Nat. Rev. Mol. Cell Biol., 12, 377-384.
-
(2011)
Nat. Rev. Mol. Cell Biol.
, vol.12
, pp. 377-384
-
-
Tutucci, E.1
Stutz, F.2
-
6
-
-
67650492477
-
Mechanisms of nuclear mRNA quality control
-
Fasken, M.B. and Corbett, A.H. (2009) Mechanisms of nuclear mRNA quality control. RNA Biol., 6, 237-241.
-
(2009)
RNA Biol.
, vol.6
, pp. 237-241
-
-
Fasken, M.B.1
Corbett, A.H.2
-
7
-
-
84872396711
-
Transcription-associated quality control of mRNP
-
Schmid, M. and Jensen, T.H. (2013) Transcription-associated quality control of mRNP. Biochim. Biophys. Acta, 1829, 158-168.
-
(2013)
Biochim. Biophys. Acta
, vol.1829
, pp. 158-168
-
-
Schmid, M.1
Jensen, T.H.2
-
8
-
-
52949089292
-
The exosome: A multipurpose RNA-decay machine
-
Schmid, M. and Jensen, T.H. (2008) The exosome: a multipurpose RNA-decay machine. Trends Biochem. Sci., 33, 501-510.
-
(2008)
Trends Biochem. Sci.
, vol.33
, pp. 501-510
-
-
Schmid, M.1
Jensen, T.H.2
-
9
-
-
0036889142
-
Interactions between mRNA export commitment, 3′-end quality control, and nuclear degradation
-
Libri, D., Dower, K., Boulay, J., Thomsen, R., Rosbash, M. and Jensen, T.H. (2002) Interactions between mRNA export commitment, 3′-end quality control, and nuclear degradation. Mol. Cell. Biol., 22, 8254-8266.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 8254-8266
-
-
Libri, D.1
Dower, K.2
Boulay, J.3
Thomsen, R.4
Rosbash, M.5
Jensen, T.H.6
-
10
-
-
34247628538
-
Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants
-
Rougemaille, M., Gudipati, R.K., Olesen, J.R., Thomsen, R., Seraphin, B., Libri, D. and Jensen, T.H. (2007) Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants. EMBO J., 26, 2317-2326.
-
(2007)
EMBO J.
, vol.26
, pp. 2317-2326
-
-
Rougemaille, M.1
Gudipati, R.K.2
Olesen, J.R.3
Thomsen, R.4
Seraphin, B.5
Libri, D.6
Jensen, T.H.7
-
11
-
-
55549097135
-
Exonucleolysis is required for nuclear mRNA quality control in yeast THO mutants
-
Assenholt, J., Mouaikel, J., Andersen, K.R., Brodersen, D.E., Libri, D. and Jensen, T.H. (2008) Exonucleolysis is required for nuclear mRNA quality control in yeast THO mutants. RNA, 14, 2305-2313.
-
(2008)
RNA
, vol.14
, pp. 2305-2313
-
-
Assenholt, J.1
Mouaikel, J.2
Andersen, K.R.3
Brodersen, D.E.4
Libri, D.5
Jensen, T.H.6
-
12
-
-
84922137862
-
Regulation of mRNA trafficking by nuclear pore complexes
-
Bonnet, A. and Palancade, B. (2014) Regulation of mRNA trafficking by nuclear pore complexes. Genes (Basel), 5, 767-791.
-
(2014)
Genes (Basel)
, vol.5
, pp. 767-791
-
-
Bonnet, A.1
Palancade, B.2
-
13
-
-
79959291765
-
The Tpr protein regulates export of mRNAs with retained introns that traffic through the Nxf1 pathway
-
Coyle, J.H., Bor, Y.C., Rekosh, D. and Hammarskjold, M.L. (2011) The Tpr protein regulates export of mRNAs with retained introns that traffic through the Nxf1 pathway. RNA, 17, 1344-1356.
-
(2011)
RNA
, vol.17
, pp. 1344-1356
-
-
Coyle, J.H.1
Bor, Y.C.2
Rekosh, D.3
Hammarskjold, M.L.4
-
14
-
-
84855857058
-
Localization of nucleoporin Tpr to the nuclear pore complex is essential for Tpr mediated regulation of the export of unspliced RNA
-
Rajanala, K. and Nandicoori, V.K. (2012) Localization of nucleoporin Tpr to the nuclear pore complex is essential for Tpr mediated regulation of the export of unspliced RNA. PLoS One, 7, e29921.
-
(2012)
PLoS One
, vol.7
, pp. e29921
-
-
Rajanala, K.1
Nandicoori, V.K.2
-
15
-
-
84861778204
-
Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention
-
Yap, K., Lim, Z.Q., Khandelia, P., Friedman, B. and Makeyev, E.V. (2012) Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention. Genes Dev., 26, 1209-1223.
-
(2012)
Genes Dev.
, vol.26
, pp. 1209-1223
-
-
Yap, K.1
Lim, Z.Q.2
Khandelia, P.3
Friedman, B.4
Makeyev, E.V.5
-
16
-
-
0037417959
-
The C-terminal domain of myosin-like protein 1 (Mlp1p) is a docking site for heterogeneous nuclear ribonucleoproteins that are required for mRNA export
-
Green, D.M., Johnson, C.P., Hagan, H. and Corbett, A.H. (2003) The C-terminal domain of myosin-like protein 1 (Mlp1p) is a docking site for heterogeneous nuclear ribonucleoproteins that are required for mRNA export. Proc. Natl. Acad. Sci. U.S.A., 100, 1010-1015.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 1010-1015
-
-
Green, D.M.1
Johnson, C.P.2
Hagan, H.3
Corbett, A.H.4
-
17
-
-
15444368318
-
Perinuclear Mlp proteins downregulate gene expression in response to a defect in mRNA export
-
Vinciguerra, P., Iglesias, N., Camblong, J., Zenklusen, D. and Stutz, F. (2005) Perinuclear Mlp proteins downregulate gene expression in response to a defect in mRNA export. EMBO J., 24, 813-823.
-
(2005)
EMBO J.
, vol.24
, pp. 813-823
-
-
Vinciguerra, P.1
Iglesias, N.2
Camblong, J.3
Zenklusen, D.4
Stutz, F.5
-
18
-
-
84890471918
-
The nuclear basket proteins Mlp1p and Mlp2p are part of a dynamic interactome including Esc1p and the proteasome
-
Niepel, M., Molloy, K.R., Williams, R., Farr, J.C., Meinema, A.C., Vecchietti, N., Cristea, I.M., Chait, B.T., Rout, M.P. and Strambio-De-Castillia, C. (2013) The nuclear basket proteins Mlp1p and Mlp2p are part of a dynamic interactome including Esc1p and the proteasome. Mol. Biol. Cell, 24, 3920-3938.
-
(2013)
Mol. Biol. Cell
, vol.24
, pp. 3920-3938
-
-
Niepel, M.1
Molloy, K.R.2
Williams, R.3
Farr, J.C.4
Meinema, A.C.5
Vecchietti, N.6
Cristea, I.M.7
Chait, B.T.8
Rout, M.P.9
Strambio-De-Castillia, C.10
-
19
-
-
84899849700
-
Sumoylation of the THO complex regulates the biogenesis of a subset of mRNPs
-
Bretes, H., Rouviere, J.O., Leger, T., Oeffinger, M., Devaux, F., Doye, V. and Palancade, B. (2014) Sumoylation of the THO complex regulates the biogenesis of a subset of mRNPs. Nucleic Acids Res., 42, 5043-5058.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 5043-5058
-
-
Bretes, H.1
Rouviere, J.O.2
Leger, T.3
Oeffinger, M.4
Devaux, F.5
Doye, V.6
Palancade, B.7
-
20
-
-
0742304306
-
Nuclear retention of unspliced mRNAs in yeast is mediated by perinuclear Mlp1
-
Galy, V., Gadal, O., Fromont-Racine, M., Romano, A., Jacquier, A. and Nehrbass, U. (2004) Nuclear retention of unspliced mRNAs in yeast is mediated by perinuclear Mlp1. Cell, 116, 63-73.
-
(2004)
Cell
, vol.116
, pp. 63-73
-
-
Galy, V.1
Gadal, O.2
Fromont-Racine, M.3
Romano, A.4
Jacquier, A.5
Nehrbass, U.6
-
21
-
-
27644511335
-
Pml39, a novel protein of the nuclear periphery required for nuclear retention of improper messenger ribonucleoparticles
-
Palancade, B., Zuccolo, M., Loeillet, S., Nicolas, A. and Doye, V. (2005) Pml39, a novel protein of the nuclear periphery required for nuclear retention of improper messenger ribonucleoparticles. Mol. Biol. Cell, 16, 5258-5268.
-
(2005)
Mol. Biol. Cell
, vol.16
, pp. 5258-5268
-
-
Palancade, B.1
Zuccolo, M.2
Loeillet, S.3
Nicolas, A.4
Doye, V.5
-
22
-
-
77956277960
-
Ubiquitin-mediated mRNP dynamics and surveillance prior to budding yeast mRNA export
-
Iglesias, N., Tutucci, E., Gwizdek, C., Vinciguerra, P., Von Dach, E., Corbett, A.H., Dargemont, C. and Stutz, F. (2010) Ubiquitin-mediated mRNP dynamics and surveillance prior to budding yeast mRNA export. Genes Dev., 24, 1927-1938.
-
(2010)
Genes Dev.
, vol.24
, pp. 1927-1938
-
-
Iglesias, N.1
Tutucci, E.2
Gwizdek, C.3
Vinciguerra, P.4
Von Dach, E.5
Corbett, A.H.6
Dargemont, C.7
Stutz, F.8
-
23
-
-
84919923534
-
Widespread intron retention in mammals functionally tunes transcriptomes
-
Braunschweig, U., Barbosa-Morais, N.L., Pan, Q., Nachman, E.N., Alipanahi, B., Gonatopoulos-Pournatzis, T., Frey, B., Irimia, M. and Blencowe, B.J. (2014) Widespread intron retention in mammals functionally tunes transcriptomes. Genome Res., 24, 1774-1786.
-
(2014)
Genome Res.
, vol.24
, pp. 1774-1786
-
-
Braunschweig, U.1
Barbosa-Morais, N.L.2
Pan, Q.3
Nachman, E.N.4
Alipanahi, B.5
Gonatopoulos-Pournatzis, T.6
Frey, B.7
Irimia, M.8
Blencowe, B.J.9
-
24
-
-
0032876602
-
A handful of intron-containing genes produces the lion's share of yeast mRNA
-
Ares, M. Jr, Grate, L. and Pauling, M.H. (1999) A handful of intron-containing genes produces the lion's share of yeast mRNA. RNA, 5, 1138-1139.
-
(1999)
RNA
, vol.5
, pp. 1138-1139
-
-
Ares, M.1
Grate, L.2
Pauling, M.H.3
-
25
-
-
34548318654
-
A nuclear envelope protein linking nuclear pore basket assembly, SUMO protease regulation, and mRNA surveillance
-
Lewis, A., Felberbaum, R. and Hochstrasser, M. (2007) A nuclear envelope protein linking nuclear pore basket assembly, SUMO protease regulation, and mRNA surveillance. J. Cell Biol., 178, 813-827.
-
(2007)
J. Cell Biol.
, vol.178
, pp. 813-827
-
-
Lewis, A.1
Felberbaum, R.2
Hochstrasser, M.3
-
26
-
-
11244276986
-
Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing
-
Dziembowski, A., Ventura, A.P., Rutz, B., Caspary, F., Faux, C., Halgand, F., Laprevote, O. and Seraphin, B. (2004) Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing. EMBO J., 23, 4847-4856.
-
(2004)
EMBO J.
, vol.23
, pp. 4847-4856
-
-
Dziembowski, A.1
Ventura, A.P.2
Rutz, B.3
Caspary, F.4
Faux, C.5
Halgand, F.6
Laprevote, O.7
Seraphin, B.8
-
27
-
-
58849125742
-
An endoribonuclease functionally linked to perinuclear mRNP quality control associates with the nuclear pore complexes
-
Skruzny, M., Schneider, C., Racz, A., Weng, J., Tollervey, D. and Hurt, E. (2009) An endoribonuclease functionally linked to perinuclear mRNP quality control associates with the nuclear pore complexes. PLoS Biol., 7, e8.
-
(2009)
PLoS Biol.
, vol.7
, pp. e8
-
-
Skruzny, M.1
Schneider, C.2
Racz, A.3
Weng, J.4
Tollervey, D.5
Hurt, E.6
-
28
-
-
84898930960
-
Quality control of spliced mRNAs requires the shuttling SR proteins Gbp2 and Hrb1
-
Hackmann, A., Wu, H., Schneider, U.M., Meyer, K., Jung, K. and Krebber, H. (2014) Quality control of spliced mRNAs requires the shuttling SR proteins Gbp2 and Hrb1. Nat. Commun., 5, 3123.
-
(2014)
Nat. Commun.
, vol.5
, pp. 3123
-
-
Hackmann, A.1
Wu, H.2
Schneider, U.M.3
Meyer, K.4
Jung, K.5
Krebber, H.6
-
29
-
-
41149157334
-
Sumoylating and desumoylating enzymes at nuclear pores: Underpinning their unexpected duties?
-
Palancade, B. and Doye, V. (2008) Sumoylating and desumoylating enzymes at nuclear pores: underpinning their unexpected duties? Trends. Cell. Biol., 18, 174-183.
-
(2008)
Trends. Cell. Biol.
, vol.18
, pp. 174-183
-
-
Palancade, B.1
Doye, V.2
-
30
-
-
0029740012
-
Chemiluminescence: Sensitive detection technology for reporter gene assays
-
Bronstein, I., Martin, C.S., Fortin, J.J., Olesen, C.E. and Voyta, J.C. (1996) Chemiluminescence: sensitive detection technology for reporter gene assays. Clin. Chem., 42, 1542-1546.
-
(1996)
Clin. Chem.
, vol.42
, pp. 1542-1546
-
-
Bronstein, I.1
Martin, C.S.2
Fortin, J.J.3
Olesen, C.E.4
Voyta, J.C.5
-
31
-
-
59249091313
-
In vivo detection and characterization of sumoylation targets in Saccharomyces cerevisiae
-
Ulrich, H.D. and Davies, A.A. (2009) In vivo detection and characterization of sumoylation targets in Saccharomyces cerevisiae. Methods Mol. Biol., 497, 81-103.
-
(2009)
Methods Mol. Biol.
, vol.497
, pp. 81-103
-
-
Ulrich, H.D.1
Davies, A.A.2
-
32
-
-
17144370940
-
The mRNA nuclear export factor Hpr1 is regulated by Rsp5-mediated ubiquitylation
-
Gwizdek, C., Hobeika, M., Kus, B., Ossareh-Nazari, B., Dargemont, C. and Rodriguez, M.S. (2005) The mRNA nuclear export factor Hpr1 is regulated by Rsp5-mediated ubiquitylation. J. Biol. Chem., 280, 13401-13405.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 13401-13405
-
-
Gwizdek, C.1
Hobeika, M.2
Kus, B.3
Ossareh-Nazari, B.4
Dargemont, C.5
Rodriguez, M.S.6
-
33
-
-
20444366920
-
Interdependence between transcription and mRNP processing and export, and its impact on genetic stability
-
Luna, R., Jimeno, S., Marin, M., Huertas, P., Garcia-Rubio, M. and Aguilera, A. (2005) Interdependence between transcription and mRNP processing and export, and its impact on genetic stability. Mol. Cell, 18, 711-722.
-
(2005)
Mol. Cell
, vol.18
, pp. 711-722
-
-
Luna, R.1
Jimeno, S.2
Marin, M.3
Huertas, P.4
Garcia-Rubio, M.5
Aguilera, A.6
-
34
-
-
0030911425
-
Mex67p, a novel factor for nuclear mRNA export, binds to both poly(A)+ RNA and nuclear pores
-
Segref, A., Sharma, K., Doye, V., Hellwig, A., Huber, J., Luhrmann, R. and Hurt, E. (1997) Mex67p, a novel factor for nuclear mRNA export, binds to both poly(A)+ RNA and nuclear pores. EMBO J., 16, 3256-3271.
-
(1997)
EMBO J.
, vol.16
, pp. 3256-3271
-
-
Segref, A.1
Sharma, K.2
Doye, V.3
Hellwig, A.4
Huber, J.5
Luhrmann, R.6
Hurt, E.7
-
35
-
-
55249108723
-
Functional significance of the interaction between the mRNA-binding protein, Nab2, and the nuclear pore-associated protein, Mlp1, in mRNA export
-
Fasken, M.B., Stewart, M. and Corbett, A.H. (2008) Functional significance of the interaction between the mRNA-binding protein, Nab2, and the nuclear pore-associated protein, Mlp1, in mRNA export. J. Biol. Chem., 283, 27130-27143.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 27130-27143
-
-
Fasken, M.B.1
Stewart, M.2
Corbett, A.H.3
-
36
-
-
10744233477
-
Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery
-
Rodriguez-Navarro, S., Fischer, T., Luo, M.J., Antunez, O., Brettschneider, S., Lechner, J., Perez-Ortin, J.E., Reed, R. and Hurt, E. (2004) Sus1, a functional component of the SAGA histone acetylase complex and the nuclear pore-associated mRNA export machinery. Cell, 116, 75-86.
-
(2004)
Cell
, vol.116
, pp. 75-86
-
-
Rodriguez-Navarro, S.1
Fischer, T.2
Luo, M.J.3
Antunez, O.4
Brettschneider, S.5
Lechner, J.6
Perez-Ortin, J.E.7
Reed, R.8
Hurt, E.9
-
37
-
-
64049087859
-
Sem1 is a functional component of the nuclear pore complex-associated messenger RNA export machinery
-
Faza, M.B., Kemmler, S., Jimeno, S., Gonzalez-Aguilera, C., Aguilera, A., Hurt, E. and Panse, V.G. (2009) Sem1 is a functional component of the nuclear pore complex-associated messenger RNA export machinery. J. Cell Biol., 184, 833-846.
-
(2009)
J. Cell Biol.
, vol.184
, pp. 833-846
-
-
Faza, M.B.1
Kemmler, S.2
Jimeno, S.3
Gonzalez-Aguilera, C.4
Aguilera, A.5
Hurt, E.6
Panse, V.G.7
-
38
-
-
0034329461
-
A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae
-
Chavez, S., Beilharz, T., Rondon, A.G., Erdjument-Bromage, H., Tempst, P., Svejstrup, J.Q., Lithgow, T. and Aguilera, A. (2000) A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae. EMBO J., 19, 5824-5834.
-
(2000)
EMBO J.
, vol.19
, pp. 5824-5834
-
-
Chavez, S.1
Beilharz, T.2
Rondon, A.G.3
Erdjument-Bromage, H.4
Tempst, P.5
Svejstrup, J.Q.6
Lithgow, T.7
Aguilera, A.8
-
39
-
-
38149103417
-
Different physiological relevance of yeast THO/TREX subunits in gene expression and genome integrity
-
Garcia-Rubio, M., Chavez, S., Huertas, P., Tous, C., Jimeno, S., Luna, R. and Aguilera, A. (2008) Different physiological relevance of yeast THO/TREX subunits in gene expression and genome integrity. Mol. Genet. Genomics, 279, 123-132.
-
(2008)
Mol. Genet. Genomics
, vol.279
, pp. 123-132
-
-
Garcia-Rubio, M.1
Chavez, S.2
Huertas, P.3
Tous, C.4
Jimeno, S.5
Luna, R.6
Aguilera, A.7
-
40
-
-
0034808138
-
Hpr1 is preferentially required for transcription of either long or G+C-rich DNA sequences in Saccharomyces cerevisiae
-
Chavez, S., Garcia-Rubio, M., Prado, F. and Aguilera, A. (2001) Hpr1 is preferentially required for transcription of either long or G+C-rich DNA sequences in Saccharomyces cerevisiae. Mol. Cell. Biol., 21, 7054-7064.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 7054-7064
-
-
Chavez, S.1
Garcia-Rubio, M.2
Prado, F.3
Aguilera, A.4
-
41
-
-
0031439267
-
The yeast HPR1 gene has a functional role in transcriptional elongation that uncovers a novel source of genome instability
-
Chavez, S. and Aguilera, A. (1997) The yeast HPR1 gene has a functional role in transcriptional elongation that uncovers a novel source of genome instability. Genes Dev., 11, 3459-3470.
-
(1997)
Genes Dev.
, vol.11
, pp. 3459-3470
-
-
Chavez, S.1
Aguilera, A.2
-
42
-
-
0024973850
-
Some cis- and trans-acting mutants for splicing target pre-mRNA to the cytoplasm
-
Legrain, P. and Rosbash, M. (1989) Some cis- and trans-acting mutants for splicing target pre-mRNA to the cytoplasm. Cell, 57, 573-583.
-
(1989)
Cell
, vol.57
, pp. 573-583
-
-
Legrain, P.1
Rosbash, M.2
-
43
-
-
0034672160
-
Controlling gene expression in yeast by inducible site-specific recombination
-
Cheng, T.H., Chang, C.R., Joy, P., Yablok, S. and Gartenberg, M.R. (2000) Controlling gene expression in yeast by inducible site-specific recombination. Nucleic Acids Res., 28, E108.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. E108
-
-
Cheng, T.H.1
Chang, C.R.2
Joy, P.3
Yablok, S.4
Gartenberg, M.R.5
-
44
-
-
84903458941
-
Accurate, model-based tuning of synthetic gene expression using introns in S. Cerevisiae
-
Yofe, I., Zafrir, Z., Blau, R., Schuldiner, M., Tuller, T., Shapiro, E. and Ben-Yehezkel, T. (2014) Accurate, model-based tuning of synthetic gene expression using introns in S. cerevisiae. PLoS Genet., 10, e1004407.
-
(2014)
PLoS Genet.
, vol.10
, pp. e1004407
-
-
Yofe, I.1
Zafrir, Z.2
Blau, R.3
Schuldiner, M.4
Tuller, T.5
Shapiro, E.6
Ben-Yehezkel, T.7
-
45
-
-
15244358670
-
Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo
-
Mason, P.B. and Struhl, K. (2005) Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo. Mol. Cell, 17, 831-840.
-
(2005)
Mol. Cell
, vol.17
, pp. 831-840
-
-
Mason, P.B.1
Struhl, K.2
-
46
-
-
33749250561
-
Genes with internal repeats require the THO complex for transcription
-
Voynov, V., Verstrepen, K.J., Jansen, A., Runner, V.M., Buratowski, S. and Fink, G.R. (2006) Genes with internal repeats require the THO complex for transcription. Proc. Natl. Acad. Sci. U.S.A., 103, 14423-14428.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 14423-14428
-
-
Voynov, V.1
Verstrepen, K.J.2
Jansen, A.3
Runner, V.M.4
Buratowski, S.5
Fink, G.R.6
-
47
-
-
33749609648
-
An hpr1 point mutation that impairs transcription and mRNP biogenesis without increasing recombination
-
Huertas, P., Garcia-Rubio, M.L., Wellinger, R.E., Luna, R. and Aguilera, A. (2006) An hpr1 point mutation that impairs transcription and mRNP biogenesis without increasing recombination. Mol. Cell. Biol., 26, 7451-7465.
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 7451-7465
-
-
Huertas, P.1
Garcia-Rubio, M.L.2
Wellinger, R.E.3
Luna, R.4
Aguilera, A.5
-
48
-
-
0141643143
-
Molecular evidence that the eukaryotic THO/TREX complex is required for efficient transcription elongation
-
Rondon, A.G., Jimeno, S., Garcia-Rubio, M. and Aguilera, A. (2003) Molecular evidence that the eukaryotic THO/TREX complex is required for efficient transcription elongation. J. Biol. Chem., 278, 39037-39043.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 39037-39043
-
-
Rondon, A.G.1
Jimeno, S.2
Garcia-Rubio, M.3
Aguilera, A.4
-
49
-
-
9444259173
-
Mlp-dependent anchorage and stabilization of a desumoylating enzyme is required to prevent clonal lethality
-
Zhao, X., Wu, C.Y. and Blobel, G. (2004) Mlp-dependent anchorage and stabilization of a desumoylating enzyme is required to prevent clonal lethality. J. Cell Biol., 167, 605-611.
-
(2004)
J. Cell Biol.
, vol.167
, pp. 605-611
-
-
Zhao, X.1
Wu, C.Y.2
Blobel, G.3
-
50
-
-
34547726640
-
Nucleoporins prevent DNA damage accumulation by modulating Ulp1-dependent sumoylation processes
-
Palancade, B., Liu, X., Garcia-Rubio, M., Aguilera, A., Zhao, X. and Doye, V. (2007) Nucleoporins prevent DNA damage accumulation by modulating Ulp1-dependent sumoylation processes. Mol. Biol. Cell, 18, 2912-2923.
-
(2007)
Mol. Biol. Cell
, vol.18
, pp. 2912-2923
-
-
Palancade, B.1
Liu, X.2
Garcia-Rubio, M.3
Aguilera, A.4
Zhao, X.5
Doye, V.6
-
51
-
-
79956064795
-
A novel assay identifies transcript elongation roles for the Nup84 complex and RNA processing factors
-
Tous, C., Rondon, A.G., Garcia-Rubio, M., Gonzalez-Aguilera, C., Luna, R. and Aguilera, A. (2011) A novel assay identifies transcript elongation roles for the Nup84 complex and RNA processing factors. EMBO J., 30, 1953-1964.
-
(2011)
EMBO J.
, vol.30
, pp. 1953-1964
-
-
Tous, C.1
Rondon, A.G.2
Garcia-Rubio, M.3
Gonzalez-Aguilera, C.4
Luna, R.5
Aguilera, A.6
-
52
-
-
84884550965
-
The nuclear pore regulates GAL1 gene transcription by controlling the localization of the SUMO protease Ulp1
-
Texari, L., Dieppois, G., Vinciguerra, P., Contreras, M.P., Groner, A., Letourneau, A. and Stutz, F. (2013) The nuclear pore regulates GAL1 gene transcription by controlling the localization of the SUMO protease Ulp1. Mol. Cell, 51, 807-818.
-
(2013)
Mol. Cell
, vol.51
, pp. 807-818
-
-
Texari, L.1
Dieppois, G.2
Vinciguerra, P.3
Contreras, M.P.4
Groner, A.5
Letourneau, A.6
Stutz, F.7
-
53
-
-
84861912048
-
Role for gene looping in intron-mediated enhancement of transcription
-
Moabbi, A.M., Agarwal, N., El Kaderi, B. and Ansari, A. (2012) Role for gene looping in intron-mediated enhancement of transcription. Proc. Natl. Acad. Sci. U.S.A., 109, 8505-8510.
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 8505-8510
-
-
Moabbi, A.M.1
Agarwal, N.2
El Kaderi, B.3
Ansari, A.4
-
54
-
-
6344228542
-
Modulation of transcription affects mRNP quality
-
Jensen, T.H., Boulay, J., Olesen, J.R., Colin, J., Weyler, M. and Libri, D. (2004) Modulation of transcription affects mRNP quality. Mol. Cell, 16, 235-244.
-
(2004)
Mol. Cell
, vol.16
, pp. 235-244
-
-
Jensen, T.H.1
Boulay, J.2
Olesen, J.R.3
Colin, J.4
Weyler, M.5
Libri, D.6
-
55
-
-
51349129990
-
A reduction in RNA polymerase II initiation rate suppresses hyper-recombination and transcription-elongation impairment of THO mutants
-
Jimeno, S., Garcia-Rubio, M., Luna, R. and Aguilera, A. (2008) A reduction in RNA polymerase II initiation rate suppresses hyper-recombination and transcription-elongation impairment of THO mutants. Mol. Genet. Genomics, 280, 327-336.
-
(2008)
Mol. Genet. Genomics
, vol.280
, pp. 327-336
-
-
Jimeno, S.1
Garcia-Rubio, M.2
Luna, R.3
Aguilera, A.4
-
56
-
-
79251567657
-
New suppressors of THO mutations identify Thp3 (Ypr045c)-Csn12 as a protein complex involved in transcription elongation
-
Jimeno, S., Tous, C., Garcia-Rubio, M.L., Ranes, M., Gonzalez-Aguilera, C., Marin, A. and Aguilera, A. (2011) New suppressors of THO mutations identify Thp3 (Ypr045c)-Csn12 as a protein complex involved in transcription elongation. Mol. Cell. Biol., 31, 674-685.
-
(2011)
Mol. Cell. Biol.
, vol.31
, pp. 674-685
-
-
Jimeno, S.1
Tous, C.2
Garcia-Rubio, M.L.3
Ranes, M.4
Gonzalez-Aguilera, C.5
Marin, A.6
Aguilera, A.7
-
57
-
-
84888430451
-
High-frequency promoter firing links THO complex function to heavy chromatin formation
-
Mouaikel, J., Causse, S.Z., Rougemaille, M., Daubenton-Carafa, Y., Blugeon, C., Lemoine, S., Devaux, F., Darzacq, X. and Libri, D. (2013) High-frequency promoter firing links THO complex function to heavy chromatin formation. Cell Rep., 5, 1082-1094.
-
(2013)
Cell Rep.
, vol.5
, pp. 1082-1094
-
-
Mouaikel, J.1
Causse, S.Z.2
Rougemaille, M.3
Daubenton-Carafa, Y.4
Blugeon, C.5
Lemoine, S.6
Devaux, F.7
Darzacq, X.8
Libri, D.9
-
58
-
-
77957829719
-
The mitogen-activated protein kinase Slt2 regulates nuclear retention of non-heat shock mRNAs during heat shock-induced stress
-
Carmody, S.R., Tran, E.J., Apponi, L.H., Corbett, A.H. and Wente, S.R. (2010) The mitogen-activated protein kinase Slt2 regulates nuclear retention of non-heat shock mRNAs during heat shock-induced stress. Mol. Cell. Biol., 30, 5168-5179.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 5168-5179
-
-
Carmody, S.R.1
Tran, E.J.2
Apponi, L.H.3
Corbett, A.H.4
Wente, S.R.5
|