-
1
-
-
33745192792
-
Tandem mass spectrometry reveals the quaternary organization of macromolecular assemblies
-
J.L.P. Benesch, J.A. Aquilina, B.T. Ruotolo, F. Sobott, and C.V. Robinson Tandem mass spectrometry reveals the quaternary organization of macromolecular assemblies Chem. Biol. 13 2006 597 605
-
(2006)
Chem. Biol.
, vol.13
, pp. 597-605
-
-
Benesch, J.L.P.1
Aquilina, J.A.2
Ruotolo, B.T.3
Sobott, F.4
Robinson, C.V.5
-
2
-
-
79954538169
-
Revealing the quaternary structure of a heterogeneous noncovalent protein complex through surface-induced dissociation
-
A.E. Blackwell, E.D. Dodds, V. Bandarian, and V.H. Wysocki Revealing the quaternary structure of a heterogeneous noncovalent protein complex through surface-induced dissociation Anal. Chem. 83 2011 2862 2865
-
(2011)
Anal. Chem.
, vol.83
, pp. 2862-2865
-
-
Blackwell, A.E.1
Dodds, E.D.2
Bandarian, V.3
Wysocki, V.H.4
-
3
-
-
0017824077
-
Structure of prealbumin: Secondary, tertiary and quaternary interactions determined by Fourier refinement at 1.8 Å
-
C.C.F. Blake, M.J. Geisow, S.J. Oatley, B. Rérat, and C. Rérat Structure of prealbumin: secondary, tertiary and quaternary interactions determined by Fourier refinement at 1.8 Å J. Mol. Biol. 121 1978 339 356
-
(1978)
J. Mol. Biol.
, vol.121
, pp. 339-356
-
-
Blake, C.C.F.1
Geisow, M.J.2
Oatley, S.J.3
Rérat, B.4
Rérat, C.5
-
4
-
-
78449267576
-
Collision cross sections of proteins and their complexes: A calibration framework and database for gas-phase structural biology
-
M.F. Bush, Z. Hall, K. Giles, J. Hoyes, C.V. Robinson, and B.T. Ruotolo Collision cross sections of proteins and their complexes: a calibration framework and database for gas-phase structural biology Anal. Chem. 82 2010 9557 9565
-
(2010)
Anal. Chem.
, vol.82
, pp. 9557-9565
-
-
Bush, M.F.1
Hall, Z.2
Giles, K.3
Hoyes, J.4
Robinson, C.V.5
Ruotolo, B.T.6
-
5
-
-
0038309550
-
Protein stability induced by ligand binding correlates with changes in protein flexibility
-
M.S. Celej, G.G. Montich, and G.D. Fidelio Protein stability induced by ligand binding correlates with changes in protein flexibility Protein Sci. 12 2003 1496 1506
-
(2003)
Protein Sci.
, vol.12
, pp. 1496-1506
-
-
Celej, M.S.1
Montich, G.G.2
Fidelio, G.D.3
-
7
-
-
84878306995
-
Protein-protein interactions: General trends in the relationship between binding affinity and interfacial buried surface area
-
J. Chen, N. Sawyer, and L. Regan Protein-protein interactions: general trends in the relationship between binding affinity and interfacial buried surface area Protein Sci. 22 2013 510 515
-
(2013)
Protein Sci.
, vol.22
, pp. 510-515
-
-
Chen, J.1
Sawyer, N.2
Regan, L.3
-
8
-
-
54549098184
-
Target flexibility: An emerging consideration in drug discovery and design
-
P. Cozzini, G.E. Kellogg, F. Spyrakis, D.J. Abraham, G. Costantino, A. Emerson, F. Fanelli, H. Gohlke, L.A. Kuhn, and G.M. Morris Target flexibility: an emerging consideration in drug discovery and design J. Med. Chem. 51 2008 6237 6255
-
(2008)
J. Med. Chem.
, vol.51
, pp. 6237-6255
-
-
Cozzini, P.1
Kellogg, G.E.2
Spyrakis, F.3
Abraham, D.J.4
Costantino, G.5
Emerson, A.6
Fanelli, F.7
Gohlke, H.8
Kuhn, L.A.9
Morris, G.M.10
-
9
-
-
84873022296
-
Dissociation kinetics of the streptavidin-biotin interaction measured using direct electrospray ionization mass spectrometry analysis
-
L. Deng, E. Kitova, and J. Klassen Dissociation kinetics of the streptavidin-biotin interaction measured using direct electrospray ionization mass spectrometry analysis J. Am. Soc. Mass Spectrom. 24 2013 49 56
-
(2013)
J. Am. Soc. Mass Spectrom.
, vol.24
, pp. 49-56
-
-
Deng, L.1
Kitova, E.2
Klassen, J.3
-
10
-
-
0343941543
-
Extremely high thermal stability of streptavidin and avidin upon biotin binding
-
M.N. González, C.E. Argaraña, and G.D. Fidelio Extremely high thermal stability of streptavidin and avidin upon biotin binding Biomol. Eng. 16 1999 67 72
-
(1999)
Biomol. Eng.
, vol.16
, pp. 67-72
-
-
González, M.N.1
Argaraña, C.E.2
Fidelio, G.D.3
-
12
-
-
0025288944
-
[5] Avidin and streptavidin
-
W. Meir, A.B. Edward, Academic Press
-
N.M. Green [5] Avidin and streptavidin W. Meir, A.B. Edward, Methods Enzymol Vol. 184 1990 Academic Press 51 67
-
(1990)
Methods Enzymol
, vol.184
, pp. 51-67
-
-
Green, N.M.1
-
13
-
-
7244239509
-
Application of electrospray ionization mass spectrometry to study the hydrophobic interaction between the ε and θ subunits of DNA polymerase III
-
R. Gupta, S.M. Hamdan, N.E. Dixon, M.M. Sheil, and J.L. Beck Application of electrospray ionization mass spectrometry to study the hydrophobic interaction between the ε and θ subunits of DNA polymerase III Protein Sci. 13 2004 2878 2887
-
(2004)
Protein Sci.
, vol.13
, pp. 2878-2887
-
-
Gupta, R.1
Hamdan, S.M.2
Dixon, N.E.3
Sheil, M.M.4
Beck, J.L.5
-
14
-
-
84863416219
-
Charge-state dependent compaction and dissociation of protein complexes: Insights from ion mobility and molecula dynamics
-
Z. Hall, A. Politis, M.F. Bush, L.J. Smith, and C.V. Robinson Charge-state dependent compaction and dissociation of protein complexes: insights from ion mobility and molecular dynamics J. Am. Chem. Soc. 134 2012 3429 3438
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 3429-3438
-
-
Hall, Z.1
Politis, A.2
Bush, M.F.3
Smith, L.J.4
Robinson, C.V.5
-
15
-
-
0024653594
-
Crystal structure of core streptavidin determined from multiwavelength anomalous diffraction of synchrotron radiation
-
W.A. Hendrickson, A. Pähler, J.L. Smith, Y. Satow, E.A. Merritt, and R.P. Phizackerley Crystal structure of core streptavidin determined from multiwavelength anomalous diffraction of synchrotron radiation Proc. Natl. Acad. Sci. USA 86 1989 2190 2194
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 2190-2194
-
-
Hendrickson, W.A.1
Pähler, A.2
Smith, J.L.3
Satow, Y.4
Merritt, E.A.5
Phizackerley, R.P.6
-
16
-
-
34347228701
-
Determining the stoichiometry and interactions of macromolecular assemblies from mass spectrometry
-
H. Hernandez, and C.V. Robinson Determining the stoichiometry and interactions of macromolecular assemblies from mass spectrometry Nat. Protoc. 2 2007 715 726
-
(2007)
Nat. Protoc.
, vol.2
, pp. 715-726
-
-
Hernandez, H.1
Robinson, C.V.2
-
17
-
-
64749105610
-
Gas-phase unfolding and disassembly reveals stability differences in ligand-bound multiprotein complexes
-
S.-J. Hyung, C.V. Robinson, and B.T. Ruotolo Gas-phase unfolding and disassembly reveals stability differences in ligand-bound multiprotein complexes Chem. Biol. 16 2009 382 390
-
(2009)
Chem. Biol.
, vol.16
, pp. 382-390
-
-
Hyung, S.-J.1
Robinson, C.V.2
Ruotolo, B.T.3
-
18
-
-
33845222072
-
Symmetrical gas-phase dissociation of noncovalent protein complexes via surface collisions
-
C.M. Jones, R.L. Beardsley, A.S. Galhena, S. Dagan, G. Cheng, and V.H. Wysocki Symmetrical gas-phase dissociation of noncovalent protein complexes via surface collisions J. Am. Chem. Soc. 128 2006 15044 15045
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 15044-15045
-
-
Jones, C.M.1
Beardsley, R.L.2
Galhena, A.S.3
Dagan, S.4
Cheng, G.5
Wysocki, V.H.6
-
19
-
-
0036135966
-
Use of electrospray ionization mass spectrometry to study binding interactions between a replication terminator protein and DNA
-
A. Kapur, J.L. Beck, S.E. Brown, N.E. Dixon, and M.M. Sheil Use of electrospray ionization mass spectrometry to study binding interactions between a replication terminator protein and DNA Protein Sci. 11 2002 147 157
-
(2002)
Protein Sci.
, vol.11
, pp. 147-157
-
-
Kapur, A.1
Beck, J.L.2
Brown, S.E.3
Dixon, N.E.4
Sheil, M.M.5
-
20
-
-
0031570336
-
Amyloid fibril formation and protein misassembly: A structural quest for insights into amyloid and prion diseases
-
J.W. Kelly Amyloid fibril formation and protein misassembly: a structural quest for insights into amyloid and prion diseases Structure 5 1997 595 600
-
(1997)
Structure
, vol.5
, pp. 595-600
-
-
Kelly, J.W.1
-
21
-
-
0036237693
-
ORF6 from the clavulanic acid gene cluster of Streptomyces clavuligerus has ornithine acetyltransferase activity
-
N.J. Kershaw, H.J. McNaughton, K.S. Hewitson, H. Hernández, J. Griffin, C. Hughes, P. Greaves, B. Barton, C.V. Robinson, and C.J. Schofield ORF6 from the clavulanic acid gene cluster of Streptomyces clavuligerus has ornithine acetyltransferase activity Eur. J. Biochem. 269 2002 2052 2059
-
(2002)
Eur. J. Biochem.
, vol.269
, pp. 2052-2059
-
-
Kershaw, N.J.1
McNaughton, H.J.2
Hewitson, K.S.3
Hernández, H.4
Griffin, J.5
Hughes, C.6
Greaves, P.7
Barton, B.8
Robinson, C.V.9
Schofield, C.J.10
-
22
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Protein interfaces, surfaces and assemblies' service PISA at the European Bioinformatics Institute
-
E. Krissinel, and K. Henrick Inference of macromolecular assemblies from crystalline stateJ. Mol. Biol. 372 2007 774 797 'Protein interfaces, surfaces and assemblies' service PISA at the European Bioinformatics Institute http://www.ebi.ac.uk/pdbe/prot-int/pistart.html
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
26
-
-
0028447420
-
Observation of the noncovalent quaternary associations of proteins by electrospray ionization mass spectrometry
-
K.J. Light-Wahl, B.L. Schwartz, and R.D. Smith Observation of the noncovalent quaternary associations of proteins by electrospray ionization mass spectrometry J. Am. Chem. Soc. 116 1994 5271 5278
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 5271-5278
-
-
Light-Wahl, K.J.1
Schwartz, B.L.2
Smith, R.D.3
-
27
-
-
0036088602
-
The linkage between protein folding and functional cooperativity: Two sides of the same coin?
-
I. Luque, S.A. Leavitt, and E. Freire The linkage between protein folding and functional cooperativity: two sides of the same coin? Annu. Rev. Biophys. Biomol. Struct. 31 2002 235 256
-
(2002)
Annu. Rev. Biophys. Biomol. Struct.
, vol.31
, pp. 235-256
-
-
Luque, I.1
Leavitt, S.A.2
Freire, E.3
-
28
-
-
0000645601
-
Average cross-sectional areas of molecules by gaseous diffusion methods
-
E. Mack Average cross-sectional areas of molecules by gaseous diffusion methods J. Am. Chem. Soc. 47 1925 2468 2482
-
(1925)
J. Am. Chem. Soc.
, vol.47
, pp. 2468-2482
-
-
Mack, E.1
-
29
-
-
84930715900
-
Structure, dynamics, assembly, and evolution of protein complexes
-
J.A. Marsh, and S.A. Teichmann Structure, dynamics, assembly, and evolution of protein complexes Annu. Rev. Biochem. 2014 10.1146/annurev-biochem-060614-034142
-
(2014)
Annu. Rev. Biochem.
-
-
Marsh, J.A.1
Teichmann, S.A.2
-
30
-
-
84860691616
-
TTR fibril formation inhibitors: Is there a SAR?
-
S. Nencetti, and E. Orlandini TTR fibril formation inhibitors: is there a SAR? Curr. Med. Chem. 19 2012 2356 2379
-
(2012)
Curr. Med. Chem.
, vol.19
, pp. 2356-2379
-
-
Nencetti, S.1
Orlandini, E.2
-
32
-
-
33750486164
-
The structure of p53 tumour suppressor protein reveals the basis for its functional plasticity
-
A.L. Okorokov, M.B. Sherman, C. Plisson, V. Grinkevich, K. Sigmundsson, G. Selivanova, J. Milner, and E.V. Orlova The structure of p53 tumour suppressor protein reveals the basis for its functional plasticity EMBO J. 25 2006 5191 5200
-
(2006)
EMBO J.
, vol.25
, pp. 5191-5200
-
-
Okorokov, A.L.1
Sherman, M.B.2
Plisson, C.3
Grinkevich, V.4
Sigmundsson, K.5
Selivanova, G.6
Milner, J.7
Orlova, E.V.8
-
33
-
-
84861450634
-
Evolution of oligomeric state through geometric coupling of protein interfaces
-
T. Perica, C. Chothia, and S.A. Teichmann Evolution of oligomeric state through geometric coupling of protein interfaces Proc. Natl. Acad. Sci. USA 109 2012 8127 8132
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 8127-8132
-
-
Perica, T.1
Chothia, C.2
Teichmann, S.A.3
-
34
-
-
84876932614
-
Ligand binding and unfolding of tryptophan synthase revealed by ion mobility-tandem mass spectrometry employing collision and surface induced dissociation
-
R. Quintyn, M. Zhou, S. Dagan, J. Finke, and V. Wysocki Ligand binding and unfolding of tryptophan synthase revealed by ion mobility-tandem mass spectrometry employing collision and surface induced dissociation Int. J. Ion Mobil. Spec. 16 2013 133 143
-
(2013)
Int. J. Ion Mobil. Spec.
, vol.16
, pp. 133-143
-
-
Quintyn, R.1
Zhou, M.2
Dagan, S.3
Finke, J.4
Wysocki, V.5
-
35
-
-
33749685413
-
Binding properties of HABA-Type Azo derivatives to avidin and avidin-related protein 4
-
S. Repo, T.A. Paldanius, V.P. Hytönen, T.K.M. Nyholm, K.K. Halling, J. Huuskonen, O.T. Pentikäinen, K. Rissanen, J.P. Slotte, and T.T. Airenne Binding properties of HABA-Type Azo derivatives to avidin and avidin-related protein 4 Chem. Biol. 13 2006 1029 1039
-
(2006)
Chem. Biol.
, vol.13
, pp. 1029-1039
-
-
Repo, S.1
Paldanius, T.A.2
Hytönen, V.P.3
Nyholm, T.K.M.4
Halling, K.K.5
Huuskonen, J.6
Pentikäinen, O.T.7
Rissanen, K.8
Slotte, J.P.9
Airenne, T.T.10
-
36
-
-
0028938525
-
Intersubunit contacts made by tryptophan 120 with biotin are essential for both strong biotin binding and biotin-induced tighter subunit association of streptavidin
-
T. Sano, and C.R. Cantor Intersubunit contacts made by tryptophan 120 with biotin are essential for both strong biotin binding and biotin-induced tighter subunit association of streptavidin Proc. Natl. Acad. Sci. USA 92 1995 3180 3184
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 3180-3184
-
-
Sano, T.1
Cantor, C.R.2
-
38
-
-
65249148484
-
QuatIdent: A web server for identifying protein quaternary structural attribute by fusing functional domain and sequential evolution information
-
H.-B. Shen, and K.-C. Chou QuatIdent: a web server for identifying protein quaternary structural attribute by fusing functional domain and sequential evolution information J. Proteome Res. 8 2009 1577 1584
-
(2009)
J. Proteome Res.
, vol.8
, pp. 1577-1584
-
-
Shen, H.-B.1
Chou, K.-C.2
-
39
-
-
0030580028
-
An exact hard-spheres scattering model for the mobilities of polyatomic ions
-
A.A. Shvartsburg, and M.F. Jarrold An exact hard-spheres scattering model for the mobilities of polyatomic ions Chem. Phys. Lett. 261 1996 86 91
-
(1996)
Chem. Phys. Lett.
, vol.261
, pp. 86-91
-
-
Shvartsburg, A.A.1
Jarrold, M.F.2
-
40
-
-
78649898335
-
Protein flexibility and ligand recognition: Challenges for molecular modeling
-
F. Spyrakis, A. BidonChanal, X. Barril, and F.J. Luque Protein flexibility and ligand recognition: challenges for molecular modeling Curr. Top. Med. Chem. 11 2011 192 210
-
(2011)
Curr. Top. Med. Chem.
, vol.11
, pp. 192-210
-
-
Spyrakis, F.1
Bidonchanal, A.2
Barril, X.3
Luque, F.J.4
-
41
-
-
0037666888
-
Implications of protein flexibility for drug discovery
-
S.J. Teague Implications of protein flexibility for drug discovery Nat. Rev. Drug Discov. 2 2003 527 541
-
(2003)
Nat. Rev. Drug Discov.
, vol.2
, pp. 527-541
-
-
Teague, S.J.1
-
42
-
-
63149089900
-
Self-assembly and evolution of homomeric protein complexes
-
G. Villar, A.W. Wilber, A.J. Williamson, P. Thiara, J.P.K. Doye, A.A.Louis, M.N. Jochum, A.C.F. Lewis, and E.D. Levy Self-assembly and evolution of homomeric protein complexes Phys. Rev. Lett. 102 2009 118106
-
(2009)
Phys. Rev. Lett.
, vol.102
, pp. 118106
-
-
Villar, G.1
Wilber, A.W.2
Williamson, A.J.3
Thiara, P.4
Doye, J.P.K.5
Louis, A.A.6
Jochum, M.N.7
Lewis, A.C.F.8
Levy, E.D.9
-
44
-
-
0030572683
-
For protein misassembly, it's the "i" decade
-
R. Wetzel For protein misassembly, it's the "I" decade Cell 86 1996 699 702
-
(1996)
Cell
, vol.86
, pp. 699-702
-
-
Wetzel, R.1
-
45
-
-
0030484635
-
Structures of human transthyretin complexed with thyroxine at 2.0 A resolution and 3',5'-dinitro-N-acetyl-l-thyronine at 2.2 A resolution
-
A. Wojtczak, V. Cody, J.R. Luft, and W. Pangborn Structures of human transthyretin complexed with thyroxine at 2.0 A resolution and 3',5'-dinitro-N-acetyl-l-thyronine at 2.2 A resolution Acta Crystallogr. D Biol. Crystallogr. 52 1996 758 765
-
(1996)
Acta Crystallogr. D Biol. Crystallogr.
, vol.52
, pp. 758-765
-
-
Wojtczak, A.1
Cody, V.2
Luft, J.R.3
Pangborn, W.4
-
46
-
-
84898915327
-
Surface induced dissociation: Dissecting noncovalent protein complexes in the gas phase
-
M. Zhou, and V.H. Wysocki Surface induced dissociation: dissecting noncovalent protein complexes in the gas phase Acc. Chem. Res. 47 2014 1010 1018
-
(2014)
Acc. Chem. Res.
, vol.47
, pp. 1010-1018
-
-
Zhou, M.1
Wysocki, V.H.2
-
47
-
-
84860170318
-
Protein subunits released by surface collisions of noncovalent complexes: Nativelike compact structures revealed by ion mobility mass spectrometry
-
M. Zhou, S. Dagan, and V.H. Wysocki Protein subunits released by surface collisions of noncovalent complexes: nativelike compact structures revealed by ion mobility mass spectrometry Angew. Chem. Int. Ed. Engl. 51 2012 4336 4339
-
(2012)
Angew. Chem. Int. Ed. Engl.
, vol.51
, pp. 4336-4339
-
-
Zhou, M.1
Dagan, S.2
Wysocki, V.H.3
-
48
-
-
84883469313
-
Dissecting the large noncovalent protein complex GroEL with surface-induced dissociation and ion mobility-mass spectrometry
-
M. Zhou, C.M. Jones, and V.H. Wysocki Dissecting the large noncovalent protein complex GroEL with surface-induced dissociation and ion mobility-mass spectrometry Anal. Chem. 85 2013 8262 8267
-
(2013)
Anal. Chem.
, vol.85
, pp. 8262-8267
-
-
Zhou, M.1
Jones, C.M.2
Wysocki, V.H.3
|