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Volumn 5, Issue 5, 2015, Pages 771-775

Genetic analysis of substrain divergence in non-obese diabetic (NOD) mice

Author keywords

Exome capture; Icam2; NOD mice; Substrain divergence; Type 1 diabetes

Indexed keywords

GENOMIC DNA; INTERCELLULAR ADHESION MOLECULE 2;

EID: 84929873391     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.115.017046     Document Type: Article
Times cited : (19)

References (24)
  • 2
    • 40749162839 scopus 로고    scopus 로고
    • Estimation and assessment of raw copy numbers at the single locus level
    • Bengtsson, H., R. Irizarry, B. Carvalho, and T. P. Speed, 2008 Estimation and assessment of raw copy numbers at the single locus level. Bioinformatics 24: 759-767.
    • (2008) Bioinformatics , vol.24 , pp. 759-767
    • Bengtsson, H.1    Irizarry, R.2    Carvalho, B.3    Speed, T.P.4
  • 3
    • 79955483667 scopus 로고    scopus 로고
    • A framework for variation discovery and genotyping using nextgeneration DNA sequencing data
    • DePristo, M. A., E. Banks, R. Poplin, K. V. Garimella, J. R. Maguire et al., 2011 A framework for variation discovery and genotyping using nextgeneration DNA sequencing data. Nat. Genet. 43: 491-498.
    • (2011) Nat. Genet. , vol.43 , pp. 491-498
    • DePristo, M.A.1    Banks, E.2    Poplin, R.3    Garimella, K.V.4    Maguire, J.R.5
  • 4
    • 84879107769 scopus 로고    scopus 로고
    • Accelerated turnover of MHC class II molecules in nonobese diabetic mice is developmentally and environmentally regulated in vivo and dispensable for autoimmunity
    • De Riva, A., M. C. Varley, L. J. Bluck, A. Cooke, M. J. Deery et al., 2013 Accelerated turnover of MHC class II molecules in nonobese diabetic mice is developmentally and environmentally regulated in vivo and dispensable for autoimmunity. J. Immunol. 190: 5961-5971.
    • (2013) J. Immunol. , vol.190 , pp. 5961-5971
    • De Riva, A.1    Varley, M.C.2    Bluck, L.J.3    Cooke, A.4    Deery, M.J.5
  • 5
    • 84855886780 scopus 로고    scopus 로고
    • Discovery of novel variants in genotyping arrays improves genotype retention and reduces ascertainment bias
    • Didion, J. P., H. Yang, K. Sheppard, C. P. Fu, L. McMillan et al., 2012 Discovery of novel variants in genotyping arrays improves genotype retention and reduces ascertainment bias. BMC Genomics 13: 34.
    • (2012) BMC Genomics , vol.13 , pp. 34
    • Didion, J.P.1    Yang, H.2    Sheppard, K.3    Fu, C.P.4    McMillan, L.5
  • 7
    • 84855295457 scopus 로고    scopus 로고
    • Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform
    • Kircher, M., S. Sawyer, and M. Meyer, 2012 Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform. Nucleic Acids Res. 40: e3.
    • (2012) Nucleic Acids Res. , vol.40 , pp. e3
    • Kircher, M.1    Sawyer, S.2    Meyer, M.3
  • 8
    • 84890842320 scopus 로고    scopus 로고
    • C57BL/6N mutation in cytoplasmic FMRP interacting protein 2 regulates cocaine response
    • Kumar, V., K. Kim, C. Joseph, S. Kourrich, S. H. Yoo et al., 2013 C57BL/6N mutation in cytoplasmic FMRP interacting protein 2 regulates cocaine response. Science 342: 1508-1512.
    • (2013) Science , vol.342 , pp. 1508-1512
    • Kumar, V.1    Kim, K.2    Joseph, C.3    Kourrich, S.4    Yoo, S.H.5
  • 9
    • 0002758516 scopus 로고
    • The nonobese diabetic mouse: a model for analyzing the interplay between heredity and environment in development of autoimmune disease
    • Leiter, E. H., 1993 The nonobese diabetic mouse: a model for analyzing the interplay between heredity and environment in development of autoimmune disease. Ilar News 35: 4-14.
    • (1993) Ilar News , vol.35 , pp. 4-14
    • Leiter, E.H.1
  • 13
    • 84874357602 scopus 로고    scopus 로고
    • Sex differences in the gut microbiome drive hormone-dependent regulation of autoimmunity
    • Markle, J. G., D. N. Frank, S. Mortin-Toth, C. E. Robertson, L. M. Feazel et al., 2013 Sex differences in the gut microbiome drive hormone-dependent regulation of autoimmunity. Science 339: 1084-1088.
    • (2013) Science , vol.339 , pp. 1084-1088
    • Markle, J.G.1    Frank, D.N.2    Mortin-Toth, S.3    Robertson, C.E.4    Feazel, L.M.5
  • 14
    • 0035446261 scopus 로고    scopus 로고
    • Dominant role of intercellular adhesion molecule-1 in the pathogenesis of autoimmune diabetes in non-obese diabetic mice
    • Martin, S., N. K. van Den Engel, A. Vinke, E. Heidenthal, B. Schulte et al., 2001 Dominant role of intercellular adhesion molecule-1 in the pathogenesis of autoimmune diabetes in non-obese diabetic mice. J. Autoimmun. 17: 109-117.
    • (2001) J. Autoimmun. , vol.17 , pp. 109-117
    • Martin, S.1    van Den Engel, N.K.2    Vinke, A.3    Heidenthal, E.4    Schulte, B.5
  • 15
    • 84870447978 scopus 로고    scopus 로고
    • Population-based rare variant detection via pooled exome or custom hybridization capture with or without individual indexing
    • Ramos, E., B. T. Levinson, S. Chasnoff, A. Hughes, A. L. Young et al., 2012 Population-based rare variant detection via pooled exome or custom hybridization capture with or without individual indexing. BMC Genomics 13: 683.
    • (2012) BMC Genomics , vol.13 , pp. 683
    • Ramos, E.1    Levinson, B.T.2    Chasnoff, S.3    Hughes, A.4    Young, A.L.5
  • 16
  • 17
    • 84891803795 scopus 로고    scopus 로고
    • A comparative phenotypic and genomic analysis of C57BL/6J and C57BL/6N mouse strains
    • Simon, M. M., S. Greenaway, J. K. White, H. Fuchs, V. Gailus-Durner et al., 2013 A comparative phenotypic and genomic analysis of C57BL/6J and C57BL/6N mouse strains. Genome Biol. 14: R82.
    • (2013) Genome Biol. , vol.14 , pp. R82
    • Simon, M.M.1    Greenaway, S.2    White, J.K.3    Fuchs, H.4    Gailus-Durner, V.5
  • 18
    • 84910081689 scopus 로고    scopus 로고
    • Phenotypic instability between the near isogenic substrains BALB/cJ and BALB/cByJ
    • Sittig, L.J., C. Jeong, E. Tixier, J. Davis, C.M. Barrios-Camacho et al., 2014 Phenotypic instability between the near isogenic substrains BALB/cJ and BALB/cByJ. Mamm. Genome 25: 5642572.
    • (2014) Mamm. Genome , vol.25 , pp. 5642572
    • Sittig, L.J.1    Jeong, C.2    Tixier, E.3    Davis, J.4    Barrios-Camacho, C.M.5
  • 19
    • 75449110711 scopus 로고    scopus 로고
    • Genome-wide end-sequenced BAC resources for the NOD/MrkTac() and NOD/ShiLtJ() mouse genomes
    • Steward, C. A., S. Humphray, B. Plumb, M. C. Jones, M. A. Quail et al., 2010 Genome-wide end-sequenced BAC resources for the NOD/MrkTac() and NOD/ShiLtJ() mouse genomes. Genomics 95: 105-110.
    • (2010) Genomics , vol.95 , pp. 105-110
    • Steward, C.A.1    Humphray, S.2    Plumb, B.3    Jones, M.C.4    Quail, M.A.5
  • 21
    • 0027399101 scopus 로고
    • Effect of STZ administration on islet isograft and allograft survival in NOD mice
    • Takayama, Y., T. Ichikawa, and T. Maki, 1993 Effect of STZ administration on islet isograft and allograft survival in NOD mice. Diabetes 42: 324-329.
    • (1993) Diabetes , vol.42 , pp. 324-329
    • Takayama, Y.1    Ichikawa, T.2    Maki, T.3
  • 22
    • 35948984173 scopus 로고    scopus 로고
    • PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data
    • Wang, K., M. Li, D. Hadley, R. Liu, J. Glessner et al., 2007 PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data. Genome Res. 17: 1665-1674.
    • (2007) Genome Res. , vol.17 , pp. 1665-1674
    • Wang, K.1    Li, M.2    Hadley, D.3    Liu, R.4    Glessner, J.5
  • 23
    • 33847246293 scopus 로고    scopus 로고
    • Interleukin-2 gene variation impairs regulatory T cell function and causes autoimmunity
    • Yamanouchi, J., D. Rainbow, P. Serra, S. Howlett, K. Hunter et al., 2007 Interleukin-2 gene variation impairs regulatory T cell function and causes autoimmunity. Nat. Genet. 39: 329-337.
    • (2007) Nat. Genet. , vol.39 , pp. 329-337
    • Yamanouchi, J.1    Rainbow, D.2    Serra, P.3    Howlett, S.4    Hunter, K.5
  • 24
    • 69549102945 scopus 로고    scopus 로고
    • A customized and versatile high-density genotyping array for the mouse
    • Yang, H., Y. Ding, L. N. Hutchins, J. Szatkiewicz, T. A. Bell et al., 2009 A customized and versatile high-density genotyping array for the mouse. Nat. Methods 6: 663-666.
    • (2009) Nat. Methods , vol.6 , pp. 663-666
    • Yang, H.1    Ding, Y.2    Hutchins, L.N.3    Szatkiewicz, J.4    Bell, T.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.