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Volumn 6, Issue 2, 2015, Pages

Integrated microfluidic card with taqman probes and high- resolution melt analysis to detect tuberculosis drug resistance mutations across 10 genes

Author keywords

[No Author keywords available]

Indexed keywords

AMIKACIN; CAPREOMYCIN; ETHAMBUTOL; ISONIAZID; KANAMYCIN; MOXIFLOXACIN; OFLOXACIN; PYRAZINAMIDE; RIFAMPICIN; STREPTOMYCIN; BACTERIAL DNA; OLIGONUCLEOTIDE PROBE; PRIMER DNA;

EID: 84929381733     PISSN: 21612129     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.02273-14     Document Type: Article
Times cited : (32)

References (35)
  • 1
    • 79955103273 scopus 로고    scopus 로고
    • WHO report 2010. World Health Organization, Geneva, Switzerland
    • World Health Organization. 2010, Global tuberculosis control. WHO report 2010. World Health Organization, Geneva, Switzerland.
    • (2010) Global Tuberculosis Control
  • 3
    • 84918817893 scopus 로고    scopus 로고
    • Treatment outcomes of patients with multidrug-resistant and extensively drug-resistant tuberculosis according to drug susceptibility testing to first- and second-line drugs: An individual patient data meta-analysis
    • Collaborative Group for Meta-analysis of Individual Patient Data in MDR-TB
    • Bastos ML, Hussain H, Weyer K, Garcia-Garcia L, Leimane V, Leung CC, Narita M, Pena JM, Ponce-de-Leon A, Seung KJ, Shean K, Sifuentes-Osornio J, Van der Walt M, Van der Werf TS, Yew WW, Menzies D, Collaborative Group for Meta-analysis of Individual Patient Data in MDR-TB. 2014. Treatment outcomes of patients with multidrug-resistant and extensively drug-resistant tuberculosis according to drug susceptibility testing to first- and second-line drugs: an individual patient data meta-analysis. Clin Infect Dis 59:1364–1374.http://dx.doi.org/10.1093/cid/ciu619.
    • (2014) Clin Infect Dis , vol.59 , pp. 1364-1374
    • Bastos, M.L.1    Hussain, H.2    Weyer, K.3    Garcia-Garcia, L.4    Leimane, V.5    Leung, C.C.6    Narita, M.7    Pena, J.M.8    Ponce-De-Leon, A.9    Seung, K.J.10    Shean, K.11    Sifuentes-Osornio, J.12    Van Der Walt, M.13    Van Der Werf, T.S.14    Yew, W.W.15    Menzies, D.16
  • 6
    • 68549092492 scopus 로고    scopus 로고
    • Performance assessment of the GenoType MTBDRplus test and DNA sequencing in detection of multidrug-resistant Mycobacterium tuberculosis
    • Huang WL, Chen HY, Kuo YM, Jou R. 2009. Performance assessment of the GenoType MTBDRplus test and DNA sequencing in detection of multidrug-resistant Mycobacterium tuberculosis. J Clin Microbiol 47: 2520–2524.http://dx.doi.org/10.1128/JCM.02499-08.
    • (2009) J Clin Microbiol , vol.47 , pp. 2520-2524
    • Huang, W.L.1    Chen, H.Y.2    Kuo, Y.M.3    Jou, R.4
  • 7
    • 32344436911 scopus 로고    scopus 로고
    • Comparison of two commercially available DNA line probe assays for detection of multidrug-resistant Mycobacterium tuberculosis
    • Mäkinen J, Marttila HJ, Marjamäki M, Viljanen MK, Soini H. 2006. Comparison of two commercially available DNA line probe assays for detection of multidrug-resistant Mycobacterium tuberculosis. J Clin Microbiol 44:350–352.http://dx.doi.org/10.1128/JCM.44.2.350-352.2006.
    • (2006) J Clin Microbiol , vol.44 , pp. 350-352
    • Mäkinen, J.1    Marttila, H.J.2    Marjamäki, M.3    Viljanen, M.K.4    Soini, H.5
  • 9
    • 84862975750 scopus 로고    scopus 로고
    • New insights into fluoroquinolone resistance in Mycobacterium tuberculosis: Functional genetic analysis of gyrA and gyrB mutations
    • Malik S, Willby M, Sikes D, Tsodikov OV, Posey JE. 2012. New insights into fluoroquinolone resistance in Mycobacterium tuberculosis: functional genetic analysis of gyrA and gyrB mutations. PLoS One 7:e39754.http://dx.doi.org/10.1371/journal.pone.0039754.
    • (2012) Plos One , vol.7
    • Malik, S.1    Willby, M.2    Sikes, D.3    Tsodikov, O.V.4    Posey, J.E.5
  • 10
    • 79955539272 scopus 로고    scopus 로고
    • Molecular detection of mutations associated with first- and second-line drug resistance compared with conventional drug susceptibility testing of Mycobacterium tuberculosis
    • Campbell PJ, Morlock GP, Sikes RD, Dalton TL, Metchock B, Starks AM, Hooks DP, Cowan LS, Plikaytis BB, Posey JE. 2011. Molecular detection of mutations associated with first- and second-line drug resistance compared with conventional drug susceptibility testing of Mycobacterium tuberculosis. Antimicrob Agents Chemother 55:2032–2041.http://dx.doi.org/10.1128/AAC.01550-10.
    • (2011) Antimicrob Agents Chemother , vol.55 , pp. 2032-2041
    • Campbell, P.J.1    Morlock, G.P.2    Sikes, R.D.3    Dalton, T.L.4    Metchock, B.5    Starks, A.M.6    Hooks, D.P.7    Cowan, L.S.8    Plikaytis, B.B.9    Posey, J.E.10
  • 11
    • 84874536643 scopus 로고    scopus 로고
    • Digital PCR to detect and quantify heteroresistance in drug resistant Mycobacterium tubercul osis
    • Pholwat S, Stroup S, Foongladda S, Houpt E. 2013. Digital PCR to detect and quantify heteroresistance in drug resistant Mycobacterium tubercul osis. PLoS One 8: e57238. http://dx.doi.org/10.1371/journal.pone.0057238.
    • (2013) Plos One , vol.8
    • Pholwat, S.1    Stroup, S.2    Foongladda, S.3    Houpt, E.4
  • 14
    • 78049522369 scopus 로고    scopus 로고
    • High-resolution melting curve analysis for rapid detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis clinical isolates
    • Choi GE, Lee SM, Yi J, Hwang SH, Kim HH, Lee EY, Cho EH, Kim JH, Kim HJ, Chang CL. 2010. High-resolution melting curve analysis for rapid detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis clinical isolates. J Clin Microbiol 48:3893–3898.http://dx.doi.org/10.1128/JCM.00396-10.
    • (2010) J Clin Microbiol , vol.48 , pp. 3893-3898
    • Choi, G.E.1    Lee, S.M.2    Yi, J.3    Hwang, S.H.4    Kim, H.H.5    Lee, E.Y.6    Cho, E.H.7    Kim, J.H.8    Kim, H.J.9    Chang, C.L.10
  • 16
    • 78049508627 scopus 로고    scopus 로고
    • Rapid detection of multidrug-resistant Mycobacterium tuberculosis by use of real-time PCR and high-resolution melt analysis
    • Ramirez MV, Cowart KC, Campbell PJ, Morlock GP, Sikes D, Winchell JM, Posey JE. 2010. Rapid detection of multidrug-resistant Mycobacterium tuberculosis by use of real-time PCR and high-resolution melt analysis. J Clin Microbiol 48:4003–4009.http://dx.doi.org/10.1128/JCM.00812-10.
    • (2010) J Clin Microbiol , vol.48 , pp. 4003-4009
    • Ramirez, M.V.1    Cowart, K.C.2    Campbell, P.J.3    Morlock, G.P.4    Sikes, D.5    Winchell, J.M.6    Posey, J.E.7
  • 17
    • 80053483572 scopus 로고    scopus 로고
    • Rapid detection of isoniazid, rifampin, and ofloxacin resistance in Mycobacterium tuberculosis clinical isolates using high-resolution melting analysis
    • Chen X, Kong F, Wang Q, Li C, Zhang J, Gilbert GL. 2011. Rapid detection of isoniazid, rifampin, and ofloxacin resistance in Mycobacterium tuberculosis clinical isolates using high-resolution melting analysis. J Clin Microbiol 49:3450–3457.http://dx.doi.org/10.1128/JCM.01068-11.
    • (2011) J Clin Microbiol , vol.49 , pp. 3450-3457
    • Chen, X.1    Kong, F.2    Wang, Q.3    Li, C.4    Zhang, J.5    Gilbert, G.L.6
  • 18
    • 84857429292 scopus 로고    scopus 로고
    • High-resolution melting analysis for the rapid detection of fluoroquinolone and streptomycin resistance in Mycobacterium tuberculosis
    • Lee AS, Ong DC, Wong JC, Siu GK, Yam WC. 2012. High-resolution melting analysis for the rapid detection of fluoroquinolone and streptomycin resistance in Mycobacterium tuberculosis. PLoS One 7:e31934.http://dx.doi.org/10.1371/journal.pone.0031934.
    • (2012) Plos One , vol.7
    • Lee, A.S.1    Ong, D.C.2    Wong, J.C.3    Siu, G.K.4    Yam, W.C.5
  • 19
    • 78651425193 scopus 로고    scopus 로고
    • High-resolution melting facilitates mutation screening of rpsL gene associated with streptomycin resistance in Mycobacterium tuberculosis
    • Wang F, Shen H, Guan M, Wang Y, Feng Y, Weng X, Wang H, Zhang W. 2011. High-resolution melting facilitates mutation screening of rpsL gene associated with streptomycin resistance in Mycobacterium tuberculosis. Microbiol Res 166:121–128.http://dx.doi.org/10.1016/j.micres.2010.02.001.
    • (2011) Microbiol Res , vol.166 , pp. 121-128
    • Wang, F.1    Shen, H.2    Guan, M.3    Wang, Y.4    Feng, Y.5    Weng, X.6    Wang, H.7    Zhang, W.8
  • 24
    • 80052904114 scopus 로고    scopus 로고
    • Characteristics of embB mutations in multidrug-resistant Mycobacterium tuberculosis isolates in Henan, China
    • Shi D, Li L, Zhao Y, Jia Q, Li H, Coulter C, Jin Q, Zhu G. 2011. Characteristics of embB mutations in multidrug-resistant Mycobacterium tuberculosis isolates in Henan, China. J Antimicrob Chemother 66: 2240–2247.http://dx.doi.org/10.1093/jac/dkr284.
    • (2011) J Antimicrob Chemother , vol.66 , pp. 2240-2247
    • Shi, D.1    Li, L.2    Zhao, Y.3    Jia, Q.4    Li, H.5    Coulter, C.6    Jin, Q.7    Zhu, G.8
  • 25
    • 84893742980 scopus 로고    scopus 로고
    • Mutations in the embB gene and their association with ethambutol resistance in multidrug-resistant Mycobacterium tuber-culosis clinical isolates from Poland
    • Bakuła Z, Napiórkowska A, Bielecki J, Augustynowicz-Kopec´ E, Zwolska Z, Jagielski T. 2013. Mutations in the embB gene and their association with ethambutol resistance in multidrug-resistant Mycobacterium tuber-culosis clinical isolates from Poland. Biomed Res Int 2013:167954.http://dx.doi.org/10.1155/2013/167954.
    • (2013) Biomed Res Int 2013
    • Bakuła, Z.1    Napiórkowska, A.2    Bielecki, J.3    Augustynowicz-Kopec´, E.4    Zwolska, Z.5    Jagielski, T.6
  • 26
    • 36749010141 scopus 로고    scopus 로고
    • Lack of correlation between embB mutation and ethambutol MIC in Mycobacterium tuberculosis clinical isolates from China
    • Shi R, Zhang J, Otomo K, Zhang G, Sugawara I. 2007. Lack of correlation between embB mutation and ethambutol MIC in Mycobacterium tuberculosis clinical isolates from China. Antimicrob Agents Chemother 51:4515–4517.http://dx.doi.org/10.1128/AAC.00416-07.
    • (2007) Antimicrob Agents Chemother , vol.51 , pp. 4515-4517
    • Shi, R.1    Zhang, J.2    Otomo, K.3    Zhang, G.4    Sugawara, I.5
  • 27
    • 73849116052 scopus 로고    scopus 로고
    • Allelic exchange and mutant selection demonstrate that common clinical embCAB gene mutations only modestly increase resistance to ethambutol in Mycobacterium tuberculosis
    • Safi H, Fleischmann RD, Peterson SN, Jones MB, Jarrahi B, Alland D. 2010. Allelic exchange and mutant selection demonstrate that common clinical embCAB gene mutations only modestly increase resistance to ethambutol in Mycobacterium tuberculosis. Antimicrob Agents Chemother 54:103–108.http://dx.doi.org/10.1128/AAC.01288-09.
    • (2010) Antimicrob Agents Chemother , vol.54 , pp. 103-108
    • Safi, H.1    Fleischmann, R.D.2    Peterson, S.N.3    Jones, M.B.4    Jarrahi, B.5    Alland, D.6
  • 28
    • 44449139430 scopus 로고    scopus 로고
    • Transfer of embB codon 306 mutations into clinical Mycobacterium tuberculosis strains alters susceptibility to ethambutol, isoniazid, and rifampin
    • Safi H, Sayers B, Hazbón MH, Alland D. 2008. Transfer of embB codon 306 mutations into clinical Mycobacterium tuberculosis strains alters susceptibility to ethambutol, isoniazid, and rifampin. Antimicrob Agents Chemother 52:2027–2034.http://dx.doi.org/10.1128/AAC.01486-07.
    • (2008) Antimicrob Agents Chemother , vol.52 , pp. 2027-2034
    • Safi, H.1    Sayers, B.2    Hazbón, M.H.3    Alland, D.4
  • 29
    • 62949172213 scopus 로고    scopus 로고
    • Mutations at embB codon 306 are an important molecular indicator of ethambutol resistance in Mycobacterium tuberculosis
    • Starks AM, Gumusboga A, Plikaytis BB, Shinnick TM, Posey JE. 2009. Mutations at embB codon 306 are an important molecular indicator of ethambutol resistance in Mycobacterium tuberculosis. Antimicrob Agents Chemother 53:1061–1066.http://dx.doi.org/10.1128/AAC.01357-08.
    • (2009) Antimicrob Agents Chemother , vol.53 , pp. 1061-1066
    • Starks, A.M.1    Gumusboga, A.2    Plikaytis, B.B.3    Shinnick, T.M.4    Posey, J.E.5
  • 30
    • 33644899728 scopus 로고    scopus 로고
    • Evaluation of MGIT 960-based antimicrobial testing and determination of critical concentrations of first- and second-line antimicrobial drugs with drug-resistant clinical strains of Mycobacterium tuberculosis
    • Krüüner A, Yates MD, Drobniewski FA. 2006. Evaluation of MGIT 960-based antimicrobial testing and determination of critical concentrations of first- and second-line antimicrobial drugs with drug-resistant clinical strains of Mycobacterium tuberculosis. J Clin Microbiol 44: 811–818.http://dx.doi.org/10.1128/JCM.44.3.811-818.2006.
    • (2006) J Clin Microbiol , vol.44 , pp. 811-818
    • Krüüner, A.1    Yates, M.D.2    Drobniewski, F.A.3
  • 31
    • 84858595842 scopus 로고    scopus 로고
    • Performance of tuberculosis drug susceptibility testing in U.S. laboratories from 1994 to 2008
    • Angra PK, Taylor TH, Iademarco MF, Metchock B, Astles JR, Ridderhof JC. 2012. Performance of tuberculosis drug susceptibility testing in U.S. laboratories from 1994 to 2008. J Clin Microbiol 50:1233–1239.http://dx.doi.org/10.1128/JCM.06479-11.
    • (2012) J Clin Microbiol , vol.50 , pp. 1233-1239
    • Angra, P.K.1    Taylor, T.H.2    Iademarco, M.F.3    Metchock, B.4    Astles, J.R.5    Ridderhof, J.C.6
  • 33
    • 0028598761 scopus 로고
    • The new diagnostic mycobacteriology laboratory
    • Salfinger M, Pfyffer GE. 1994. The new diagnostic mycobacteriology laboratory. Eur J Clin Microbiol Infect Dis 13:961–979.http://dx.doi.org/10.1007/BF02111498.
    • (1994) Eur J Clin Microbiol Infect Dis , vol.13 , pp. 961-979
    • Salfinger, M.1    Pfyffer, G.E.2
  • 34
    • 84857400025 scopus 로고    scopus 로고
    • Real-time PCR using mycobacteriophage DNA for rapid phenotypic drug susceptibility results for Mycobacterium tuberculosis
    • Pholwat S, Ehdaie B, Foongladda S, Kelly K, Houpt E. 2012. Real-time PCR using mycobacteriophage DNA for rapid phenotypic drug susceptibility results for Mycobacterium tuberculosis. J Clin Microbiol 50: 754–761.http://dx.doi.org/10.1128/JCM.01315-11.
    • (2012) J Clin Microbiol , vol.50 , pp. 754-761
    • Pholwat, S.1    Ehdaie, B.2    Foongladda, S.3    Kelly, K.4    Houpt, E.5
  • 35
    • 84891507631 scopus 로고    scopus 로고
    • Discordance across several methods for drug susceptibility testing of drug-resistant Mycobacterium tuberculosis isolates in a single laboratory
    • Banu S, Rahman SM, Khan MS, Ferdous SS, Ahmed S, Gratz J, Stroup S, Pholwat S, Heysell SK, Houpt ER. 2014. Discordance across several methods for drug susceptibility testing of drug-resistant Mycobacterium tuberculosis isolates in a single laboratory. J Clin Microbiol 52:156–163.http://dx.doi.org/10.1128/JCM.02378-13.
    • (2014) J Clin Microbiol , vol.52 , pp. 156-163
    • Banu, S.1    Rahman, S.M.2    Khan, M.S.3    Ferdous, S.S.4    Ahmed, S.5    Gratz, J.6    Stroup, S.7    Pholwat, S.8    Heysell, S.K.9    Houpt, E.R.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.