-
1
-
-
84891369649
-
Genetic mapping of adaptation reveals fitness tradeoffs in Arabidopsis thaliana
-
Ågren, J., Oakley, C.G., McKay, J.K., Lovell, J.T., and Schemske, D.W. (2013). Genetic mapping of adaptation reveals fitness tradeoffs in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 110: 21077–21082.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 21077-21082
-
-
Ågren, J.1
Oakley, C.G.2
McKay, J.K.3
Lovell, J.T.4
Schemske, D.W.5
-
2
-
-
21444442035
-
Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information
-
Al-Shahrour, F., Díaz-Uriarte, R., and Dopazo, J. (2005). Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information. Bio-informatics 21: 2988–2993.
-
(2005)
Bio-Informatics
, vol.21
, pp. 2988-2993
-
-
Al-Shahrour, F.1
Díaz-Uriarte, R.2
Dopazo, J.3
-
3
-
-
67650866717
-
Functional tradeoffs determine species coexistence via the storage effect
-
Angert, A.L., Huxman, T.E., Chesson, P., and Venable, D.L. (2009). Functional tradeoffs determine species coexistence via the storage effect. Proc. Natl. Acad. Sci. USA 106: 11641–11645.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 11641-11645
-
-
Angert, A.L.1
Huxman, T.E.2
Chesson, P.3
Venable, D.L.4
-
4
-
-
0036599442
-
Plant breeding and drought in C3 cereals: What should we breed for
-
Araus, J.L., Slafer, G.A., Reynolds, M.P., and Royo, C. (2002). Plant breeding and drought in C3 cereals: what should we breed for? Ann. Bot. (Lond.) 89: 925–940.
-
(2002)
Ann. Bot. (Lond.)
, vol.89
, pp. 925-940
-
-
Araus, J.L.1
Slafer, G.A.2
Reynolds, M.P.3
Royo, C.4
-
5
-
-
56849108613
-
Breeding for yield potential and stress adaptation in cereals
-
Araus, J.L., Slafer, G.A., Royo, C., and Serret, M.D. (2008). Breeding for yield potential and stress adaptation in cereals. Crit. Rev. Plant Sci. 27: 377–412.
-
(2008)
Crit. Rev. Plant Sci
, vol.27
, pp. 377-412
-
-
Araus, J.L.1
Slafer, G.A.2
Royo, C.3
Serret, M.D.4
-
6
-
-
0001055711
-
Edaphic aridity as a factor in angiosperm evolution
-
Axelrod, D.I. (1972). Edaphic aridity as a factor in angiosperm evolution. Am. Nat. 106: 311–320.
-
(1972)
Am. Nat
, vol.106
, pp. 311-320
-
-
Axelrod, D.I.1
-
7
-
-
84863472111
-
Climate envelope modelling reveals intraspecific relationships among flowering phenology, niche breadth and potential range size in Arabidopsis thaliana
-
Banta, J.A., Ehrenreich, I.M., Gerard, S., Chou, L., Wilczek, A., Schmitt, J., Kover, P.X., and Purugganan, M.D. (2012). Climate envelope modelling reveals intraspecific relationships among flowering phenology, niche breadth and potential range size in Arabidopsis thaliana. Ecol. Lett. 15: 769–777.
-
(2012)
Ecol. Lett
, vol.15
, pp. 769-777
-
-
Banta, J.A.1
Ehrenreich, I.M.2
Gerard, S.3
Chou, L.4
Wilczek, A.5
Schmitt, J.6
Kover, P.X.7
Purugganan, M.D.8
-
8
-
-
0009069024
-
Rapid determination of free proline for water-stress studies
-
Bates, L.S., Waldren, R.P., and Teare, I.D. (1973). Rapid determination of free proline for water-stress studies. Plant Soil 39: 205–207.
-
(1973)
Plant Soil
, vol.39
, pp. 205-207
-
-
Bates, L.S.1
Waldren, R.P.2
Teare, I.D.3
-
9
-
-
22144454660
-
Genetical genomics analysis of a yeast segregant population for transcription network inference
-
Bing, N., and Hoeschele, I. (2005). Genetical genomics analysis of a yeast segregant population for transcription network inference. Genetics 170: 533–542.
-
(2005)
Genetics
, vol.170
, pp. 533-542
-
-
Bing, N.1
Hoeschele, I.2
-
10
-
-
28444436598
-
Drought resistance, water-use efficiency, and yield potential—are they compatible, dissonant, or mutually exclusive?
-
Blum, A. (2005). Drought resistance, water-use efficiency, and yield potential—are they compatible, dissonant, or mutually exclusive? Crop Pasture Sci. 56: 1159–1168.
-
(2005)
Crop Pasture Sci
, vol.56
, pp. 1159-1168
-
-
Blum, A.1
-
11
-
-
34247192073
-
Gradual soil water depletion results in reversible changes of gene expression, protein profiles, ecophysiology, and growth performance in Populus euphratica, a poplar growing in arid regions
-
Bogeat-Triboulot, M.B., et al. (2007). Gradual soil water depletion results in reversible changes of gene expression, protein profiles, ecophysiology, and growth performance in Populus euphratica, a poplar growing in arid regions. Plant Physiol. 143: 876–892.
-
(2007)
Plant Physiol
, vol.143
, pp. 876-892
-
-
Bogeat-Triboulot, M.B.1
-
12
-
-
8444230584
-
Genes commonly regulated by water-deficit stress in Arabidopsis thaliana
-
Bray, E.A. (2004). Genes commonly regulated by water-deficit stress in Arabidopsis thaliana. J. Exp. Bot. 55: 2331–2341.
-
(2004)
J. Exp. Bot
, vol.55
, pp. 2331-2341
-
-
Bray, E.A.1
-
13
-
-
0037958742
-
R/qtl: QTL mapping in experimental crosses
-
Broman, K.W., Wu, H., Sen, S., and Churchill, G.A. (2003). R/qtl: QTL mapping in experimental crosses. Bioinformatics 19: 889–890.
-
(2003)
Bioinformatics
, vol.19
, pp. 889-890
-
-
Broman, K.W.1
Wu, H.2
Sen, S.3
Churchill, G.A.4
-
15
-
-
43049106154
-
Drought tolerance improvement in crop plants: An integrated view from breeding to genomics
-
Cattivelli, L., Rizza, F., Badeck, F.W., Mazzucotelli, E., Mastrangelo, A.M., Francia, E., Mare, C., Tondelli, A., and Stanca, A.M. (2008). Drought tolerance improvement in crop plants: An integrated view from breeding to genomics. Field Crops Res. 105: 1–14.
-
(2008)
Field Crops Res
, vol.105
, pp. 1-14
-
-
Cattivelli, L.1
Rizza, F.2
Badeck, F.W.3
Mazzucotelli, E.4
Mastrangelo, A.M.5
Francia, E.6
Mare, C.7
Tondelli, A.8
Stanca, A.M.9
-
16
-
-
79959352218
-
Regulatory mechanism controlling sto-matal behavior conserved across 400 million years of land plant evolution
-
Chater, C., Kamisugi, Y., Movahedi, M., Fleming, A., Cuming, A.C., Gray, J.E., and Beerling, D.J. (2011). Regulatory mechanism controlling sto-matal behavior conserved across 400 million years of land plant evolution. Curr. Biol. 21: 1025–1029.
-
(2011)
Curr. Biol
, vol.21
, pp. 1025-1029
-
-
Chater, C.1
Kamisugi, Y.2
Movahedi, M.3
Fleming, A.4
Cuming, A.C.5
Gray, J.E.6
Beerling, D.J.7
-
17
-
-
8444247981
-
Mechanisms underlying plant resilience to water deficits: Prospects for water-saving agriculture
-
Chaves, M.M., and Oliveira, M.M. (2004). Mechanisms underlying plant resilience to water deficits: prospects for water-saving agriculture. J. Exp. Bot. 55: 2365–2384.
-
(2004)
J. Exp. Bot
, vol.55
, pp. 2365-2384
-
-
Chaves, M.M.1
Oliveira, M.M.2
-
18
-
-
0242500364
-
Understanding plant responses to drought - from genes to the whole plant
-
Chaves, M.M., Maroco, J.P., and Pereira, J.S. (2003). Understanding plant responses to drought - from genes to the whole plant. Funct. Plant Biol. 30: 239–264.
-
(2003)
Funct. Plant Biol
, vol.30
, pp. 239-264
-
-
Chaves, M.M.1
Maroco, J.P.2
Pereira, J.S.3
-
19
-
-
77649130219
-
An eQTL analysis of partial resistance to Puccinia hordei in barley
-
Chen, X., et al. (2010). An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS ONE 5: e8598.
-
(2010)
Plos ONE
, vol.5
-
-
Chen, X.1
-
20
-
-
0033538559
-
Endomembrane trafficking of ras: The CAAX motif targets proteins to the ER and Golgi
-
Choy, E., Chiu, V.K., Silletti, J., Feoktistov, M., Morimoto, T., Michaelson, D., Ivanov, I.E., and Philips, M.R. (1999). Endomembrane trafficking of ras: the CAAX motif targets proteins to the ER and Golgi. Cell 98: 69–80.
-
(1999)
Cell
, vol.98
, pp. 69-80
-
-
Choy, E.1
Chiu, V.K.2
Silletti, J.3
Feoktistov, M.4
Morimoto, T.5
Michaelson, D.6
Ivanov, I.E.7
Philips, M.R.8
-
21
-
-
8444226471
-
Breeding for high water-use efficiency
-
Condon, A.G., Richards, R.A., Rebetzke, G.J., and Farquhar, G.D. (2004). Breeding for high water-use efficiency. J. Exp. Bot. 55: 2447–2460.
-
(2004)
J. Exp. Bot
, vol.55
, pp. 2447-2460
-
-
Condon, A.G.1
Richards, R.A.2
Rebetzke, G.J.3
Farquhar, G.D.4
-
22
-
-
84859911467
-
Lessons from eQTL mapping studies: Non-coding regions and their role behind natural phe-notypic variation in plants
-
Cubillos, F.A., Coustham, V., and Loudet, O. (2012). Lessons from eQTL mapping studies: non-coding regions and their role behind natural phe-notypic variation in plants. Curr. Opin. Plant Biol. 15: 192–198.
-
(2012)
Curr. Opin. Plant Biol
, vol.15
, pp. 192-198
-
-
Cubillos, F.A.1
Coustham, V.2
Loudet, O.3
-
23
-
-
77952511548
-
Abscisic acid: Emergence of a core signaling network
-
Cutler, S.R., Rodriguez, P.L., Finkelstein, R.R., and Abrams, S.R. (2010). Abscisic acid: emergence of a core signaling network. Annu. Rev. Plant Biol. 61: 651–679.
-
(2010)
Annu. Rev. Plant Biol
, vol.61
, pp. 651-679
-
-
Cutler, S.R.1
Rodriguez, P.L.2
Finkelstein, R.R.3
Abrams, S.R.4
-
25
-
-
80053199003
-
Double-strand break repair processes drive evolution of the mito-chondrial genome in Arabidopsis
-
Davila, J.I., Arrieta-Montiel, M.P., Wamboldt, Y., Cao, J., Hagmann, J., Shedge, V., Xu, Y.Z., Weigel, D., and Mackenzie, S.A. (2011). Double-strand break repair processes drive evolution of the mito-chondrial genome in Arabidopsis. BMC Biol. 9: 64–78.
-
(2011)
BMC Biol
, vol.9
, pp. 64-78
-
-
Davila, J.I.1
Arrieta-Montiel, M.P.2
Wamboldt, Y.3
Cao, J.4
Hagmann, J.5
Shedge, V.6
Xu, Y.Z.7
Weigel, D.8
Mackenzie, S.A.9
-
26
-
-
84860212089
-
Physiological genomics of response to soil drying in diverse Arabidopsis accessions
-
Des Marais, D.L., McKay, J.K., Richards, J.H., Sen, S., Wayne, T., and Juenger, T.E. (2012). Physiological genomics of response to soil drying in diverse Arabidopsis accessions. Plant Cell 24: 893–914.
-
(2012)
Plant Cell
, vol.24
, pp. 893-914
-
-
Des Marais, D.L.1
McKay, J.K.2
Richards, J.H.3
Sen, S.4
Wayne, T.5
Juenger, T.E.6
-
27
-
-
33745199150
-
Integrating genetic and gene expression data: Application to cardiovascular and metabolic traits in mice
-
Drake, T.A., Schadt, E.E., and Lusis, A.J. (2006). Integrating genetic and gene expression data: application to cardiovascular and metabolic traits in mice. Mamm. Genome 17: 466–479.
-
(2006)
Mamm. Genome
, vol.17
, pp. 466-479
-
-
Drake, T.A.1
Schadt, E.E.2
Lusis, A.J.3
-
28
-
-
84922706710
-
Quantitative trait loci and candidate genes underlying genotype by environment interaction in the response of Arabidopsis thaliana to drought
-
El-Soda, M., Kruijer, W., Malosetti, M., Koornneef, M., and Aarts, M.G. (2015). Quantitative trait loci and candidate genes underlying genotype by environment interaction in the response of Arabidopsis thaliana to drought. Plant Cell Environ. 38: 585–599.
-
(2015)
Plant Cell Environ
, vol.38
, pp. 585-599
-
-
El-Soda, M.1
Kruijer, W.2
Malosetti, M.3
Koornneef, M.4
Aarts, M.G.5
-
29
-
-
53749100493
-
Drought induction of Arabidopsis 9-cis-epoxycarotenoid dioxygenase occurs in vascular parenchyma cells
-
Endo, A., et al. (2008). Drought induction of Arabidopsis 9-cis-epoxycarotenoid dioxygenase occurs in vascular parenchyma cells. Plant Physiol. 147: 1984–1993.
-
(2008)
Plant Physiol
, vol.147
, pp. 1984-1993
-
-
Endo, A.1
-
31
-
-
33845759964
-
A constitutive shade-avoidance mutant implicates TIR-NBS-LRR proteins in Arabidopsis photomorpho-genic development
-
Faigón-Soverna, A., Harmon, F.G., Storani, L., Karayekov, E., Staneloni, R.J., Gassmann, W., Más, P., Casal, J.J., Kay, S.A., and Yanovsky, M.J. (2006). A constitutive shade-avoidance mutant implicates TIR-NBS-LRR proteins in Arabidopsis photomorpho-genic development. Plant Cell 18: 2919–2928.
-
(2006)
Plant Cell
, vol.18
, pp. 2919-2928
-
-
Faigón-Soverna, A.1
Harmon, F.G.2
Storani, L.3
Karayekov, E.4
Staneloni, R.J.5
Gassmann, W.6
Más, P.7
Casal, J.J.8
Kay, S.A.9
Yanovsky, M.J.10
-
32
-
-
0003995062
-
-
(Harlow, Essex, UK: Longmans Green)
-
Falconer, D.S., and Mackay, T.F.C. (1996). Introduction to Quantitative Genetics, (Harlow, Essex, UK: Longmans Green).
-
(1996)
Introduction to Quantitative Genetics
-
-
Falconer, D.S.1
Mackay, T.2
-
33
-
-
58149095143
-
An integrative genetics approach to identify candidate genes regulating BMD: Combining linkage, gene expression, and association
-
Farber, C.R., et al. (2009). An integrative genetics approach to identify candidate genes regulating BMD: combining linkage, gene expression, and association. J. Bone Miner. Res. 24: 105–116.
-
(2009)
J. Bone Miner. Res
, vol.24
, pp. 105-116
-
-
Farber, C.R.1
-
34
-
-
84899157501
-
Abscisic acid synthesis and response
-
Finkelstein, R. (2013). Abscisic acid synthesis and response. The Arabidopsis Book 11: e0166, doi/10.1199/tab.0166.
-
(2013)
The Arabidopsis Book
, vol.11
-
-
Finkelstein, R.1
-
35
-
-
59649090821
-
SNP genotyping using the Sequenom MassARRAY iPLEX platform
-
2: 2.12.1–2.12.18
-
Gabriel, S., Ziaugra, L., and Tabbaa, D. (2009). SNP genotyping using the Sequenom MassARRAY iPLEX platform. Curr. Protoc. Hum. Genet. 2: 2.12.1–2.12.18.
-
(2009)
Curr. Protoc. Hum. Genet
-
-
Gabriel, S.1
Ziaugra, L.2
Tabbaa, D.3
-
36
-
-
77954297751
-
Is local adaptation in Mimulus guttatus caused by trade-offs at individual loci
-
Hall, M.C., Lowry, D.B., and Willis, J.H. (2010). Is local adaptation in Mimulus guttatus caused by trade-offs at individual loci? Mol. Ecol. 19: 2739–2753.
-
(2010)
Mol. Ecol
, vol.19
, pp. 2739-2753
-
-
Hall, M.C.1
Lowry, D.B.2
Willis, J.H.3
-
37
-
-
39849095692
-
Identifying the molecular basis of QTLs: EQTLs add a new dimension
-
Hansen, B.G., Halkier, B.A., and Kliebenstein, D.J. (2008). Identifying the molecular basis of QTLs: eQTLs add a new dimension. Trends Plant Sci. 13: 72–77.
-
(2008)
Trends Plant Sci
, vol.13
, pp. 72-77
-
-
Hansen, B.G.1
Halkier, B.A.2
Kliebenstein, D.J.3
-
38
-
-
78249232289
-
Molecular and physiological analysis of drought stress in Arabi-dopsis reveals early responses leading to acclimation in plant growth
-
Harb, A., Krishnan, A., Ambavaram, M.M.R., and Pereira, A. (2010). Molecular and physiological analysis of drought stress in Arabi-dopsis reveals early responses leading to acclimation in plant growth. Plant Physiol. 154: 1254–1271.
-
(2010)
Plant Physiol
, vol.154
, pp. 1254-1271
-
-
Harb, A.1
Krishnan, A.2
Ambavaram, M.3
Pereira, A.4
-
39
-
-
12244273057
-
Mechanisms of selection for drought stress tolerance and avoidance in Impatiens capensis (Balsaminaceae)
-
Heschel, M.S., and Riginos, C. (2005). Mechanisms of selection for drought stress tolerance and avoidance in Impatiens capensis (Balsaminaceae). Am. J. Bot. 92: 37–44.
-
(2005)
Am. J. Bot
, vol.92
, pp. 37-44
-
-
Heschel, M.S.1
Riginos, C.2
-
40
-
-
0036846810
-
Population differentiation and natural selection for water‐use efficiency in Impatiens capensis (Balsaminaceae)
-
Heschel, M.S., Donohue, K., Hausmann, N., and Schmitt, J. (2002). Population differentiation and natural selection for water‐use efficiency in Impatiens capensis (Balsaminaceae). Int. J. Plant Sci. 163: 907–912.
-
(2002)
Int. J. Plant Sci
, vol.163
, pp. 907-912
-
-
Heschel, M.S.1
Donohue, K.2
Hausmann, N.3
Schmitt, J.4
-
41
-
-
84906911933
-
Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions
-
Heslot, N., Akdemir, D., Sorrells, M.E., and Jannink, J.L. (2014). Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions. Theor. Appl. Genet. 127: 463–480.
-
(2014)
Theor. Appl. Genet
, vol.127
, pp. 463-480
-
-
Heslot, N.1
Akdemir, D.2
Sorrells, M.E.3
Jannink, J.L.4
-
42
-
-
84883147613
-
Fraction-ation, stability, and isolate-specificity of QTL for resistance to Phytophthora infestans in cultivated tomato (Solanum lycopersi-cum)
-
Johnson, E.B., Haggard, J.E., and Clair, D.A.S. (2012). Fraction-ation, stability, and isolate-specificity of QTL for resistance to Phytophthora infestans in cultivated tomato (Solanum lycopersi-cum). G3 (Bethesda) 2: 1145–1159.
-
(2012)
G3 (Bethesda)
, vol.2
, pp. 1145-1159
-
-
Johnson, E.B.1
Haggard, J.E.2
Clair, D.3
-
43
-
-
84880936203
-
Hierarchical nuclear and cytoplasmic genetic architectures for plant growth and defense within Arabidopsis
-
Joseph, B., Corwin, J.A., Züst, T., Li, B., Iravani, M., Schaepman-Strub, G., Turnbull, L.A., and Kliebenstein, D.J. (2013a). Hierarchical nuclear and cytoplasmic genetic architectures for plant growth and defense within Arabidopsis. Plant Cell 25: 1929–1945.
-
(2013)
Plant Cell
, vol.25
, pp. 1929-1945
-
-
Joseph, B.1
Corwin, J.A.2
Züst, T.3
Li, B.4
Iravani, M.5
Schaepman-Strub, G.6
Turnbull, L.A.7
Kliebenstein, D.J.8
-
44
-
-
84885361865
-
Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome
-
Joseph, B., Corwin, J.A., Li, B., Atwell, S., and Kliebenstein, D.J. (2013b). Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome. eLife 2: e00776.
-
(2013)
Elife
, vol.2
-
-
Joseph, B.1
Corwin, J.A.2
Li, B.3
Atwell, S.4
Kliebenstein, D.J.5
-
45
-
-
84878996560
-
Natural variation and genetic constraints on drought tolerance
-
Juenger, T.E. (2013). Natural variation and genetic constraints on drought tolerance. Curr. Opin. Plant Biol. 16: 274–281.
-
(2013)
Curr. Opin. Plant Biol
, vol.16
, pp. 274-281
-
-
Juenger, T.E.1
-
46
-
-
77957738513
-
Exploring genetic and expression differences between physiologically extreme ecotypes: Comparative genomic hybridization and gene expression studies of Kas-1 and Tsu-1 accessions of Arabidopsis thaliana
-
Juenger, T.E., Sen, S., Bray, E., Stahl, E., Wayne, T., McKay, J., and Richards, J.H. (2010). Exploring genetic and expression differences between physiologically extreme ecotypes: comparative genomic hybridization and gene expression studies of Kas-1 and Tsu-1 accessions of Arabidopsis thaliana. Plant Cell Environ. 33: 1268–1284.
-
(2010)
Plant Cell Environ
, vol.33
, pp. 1268-1284
-
-
Juenger, T.E.1
Sen, S.2
Bray, E.3
Stahl, E.4
Wayne, T.5
McKay, J.6
Richards, J.H.7
-
47
-
-
38949168797
-
A dehydration avoidance mechanism: Leaf rolling
-
Kadioglu, A., and Terzi, R. (2007). A dehydration avoidance mechanism: leaf rolling. Bot. Rev. 73: 290–302.
-
(2007)
Bot. Rev
, vol.73
, pp. 290-302
-
-
Kadioglu, A.1
Terzi, R.2
-
48
-
-
84861897524
-
Intron-mediated alternative splicing of Arabidopsis P5CS1 and its association with natural variation in proline and climate adaptation
-
Kesari, R., Lasky, J.R., Villamor, J.G., Des Marais, D.L., Chen, Y.-J.C., Liu, T.-W., Lin, W., Juenger, T.E., and Verslues, P.E. (2012). Intron-mediated alternative splicing of Arabidopsis P5CS1 and its association with natural variation in proline and climate adaptation. Proc. Natl. Acad. Sci. USA 109: 9197–9202.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 9197-9202
-
-
Kesari, R.1
Lasky, J.R.2
Villamor, J.G.3
Des Marais, D.L.4
Chen, Y.-J.C.5
Liu, T.-W.6
Lin, W.7
Juenger, T.E.8
Verslues, P.E.9
-
49
-
-
84874483142
-
Defective chloroplast development inhibits maintenance of normal levels of abscisic acid in a mutant of the Arabidopsis RH3 DEAD-box protein during early post-germination growth
-
Lee, K.H., Park, J., Williams, D.S., Xiong, Y., Hwang, I., and Kang, B.H. (2013). Defective chloroplast development inhibits maintenance of normal levels of abscisic acid in a mutant of the Arabidopsis RH3 DEAD-box protein during early post-germination growth. Plant J. 73: 720–732.
-
(2013)
Plant J
, vol.73
, pp. 720-732
-
-
Lee, K.H.1
Park, J.2
Williams, D.S.3
Xiong, Y.4
Hwang, I.5
Kang, B.H.6
-
50
-
-
84922242933
-
Involvement of phosphatidylinositol 3-kinase in the regulation of proline catabolism in Arabidopsis thaliana
-
Leprince, A.-S., Magalhaes, N., De Vos, D., Bordenave, M., Crilat, E., Clément, G., Meyer, C., Munnik, T., and Savouré, A. (2015). Involvement of phosphatidylinositol 3-kinase in the regulation of proline catabolism in Arabidopsis thaliana. Front. Plant Sci. 5: 772.
-
(2015)
Front. Plant Sci
, vol.5
, pp. 772
-
-
Leprince, A.-S.1
Magalhaes, N.2
De Vos, D.3
Bordenave, M.4
Crilat, E.5
Clément, G.6
Meyer, C.7
Munnik, T.8
Savouré, A.9
-
51
-
-
33746623411
-
Structural model analysis of multiple quantitative traits
-
Li, R., Tsaih, S.-W., Shockley, K., Stylianou, I.M., Wergedal, J., Paigen, B., and Churchill, G.A. (2006). Structural model analysis of multiple quantitative traits. PLoS Genet. 2: e114.
-
(2006)
Plos Genet
, vol.2
-
-
Li, R.1
Tsaih, S.-W.2
Shockley, K.3
Stylianou, I.M.4
Wergedal, J.5
Paigen, B.6
Churchill, G.A.7
-
52
-
-
0032144961
-
Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Ara-bidopsis
-
Liu, Q., Kasuga, M., Sakuma, Y., Abe, H., Miura, S., Yamaguchi-Shinozaki, K., and Shinozaki, K. (1998). Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Ara-bidopsis. Plant Cell 10: 1391–1406.
-
(1998)
Plant Cell
, vol.10
, pp. 1391-1406
-
-
Liu, Q.1
Kasuga, M.2
Sakuma, Y.3
Abe, H.4
Miura, S.5
Yamaguchi-Shinozaki, K.6
Shinozaki, K.7
-
53
-
-
84892400838
-
Pleiotropy of FRIGIDA enhances the potential for multivari-ate adaptation
-
20131043
-
Lovell, J.T., Juenger, T.E., Michaels, S.D., Lasky, J.R., Platt, A., Richards, J.H., Yu, X., Easlon, H.M., Sen, S., and McKay, J.K. (2013). Pleiotropy of FRIGIDA enhances the potential for multivari-ate adaptation. Proc. Biol. Sci. 280: 20131043.
-
(2013)
Proc. Biol. Sci
, vol.280
-
-
Lovell, J.T.1
Juenger, T.E.2
Michaels, S.D.3
Lasky, J.R.4
Platt, A.5
Richards, J.H.6
Yu, X.7
Easlon, H.M.8
Sen, S.9
McKay, J.K.10
-
54
-
-
84886561316
-
Expression quantitative trait locus mapping across water availability environments reveals contrasting associations with genomic features in Arabidopsis
-
Lowry, D.B., Logan, T.L., Santuari, L., Hardtke, C.S., Richards, J.H., DeRose-Wilson, L.J., McKay, J.K., Sen, S., and Juenger, T.E. (2013). Expression quantitative trait locus mapping across water availability environments reveals contrasting associations with genomic features in Arabidopsis. Plant Cell 25: 3266–3279.
-
(2013)
Plant Cell
, vol.25
, pp. 3266-3279
-
-
Lowry, D.B.1
Logan, T.L.2
Santuari, L.3
Hardtke, C.S.4
Richards, J.H.5
Derose-Wilson, L.J.6
McKay, J.K.7
Sen, S.8
Juenger, T.E.9
-
55
-
-
0035671407
-
The genetic architecture of quantitative traits
-
Mackay, T.F.C. (2001). The genetic architecture of quantitative traits. Annu. Rev. Genet. 35: 303–339.
-
(2001)
Annu. Rev. Genet
, vol.35
, pp. 303-339
-
-
Mackay, T.1
-
56
-
-
33747713363
-
Assessing the importance of genotype x environment interaction for root traits in rice using a mapping population II: Conventional QTL analysis
-
MacMillan, K., Emrich, K., Piepho, H.P., Mullins, C.E., and Price, A.H. (2006). Assessing the importance of genotype x environment interaction for root traits in rice using a mapping population II: conventional QTL analysis. Theor. Appl. Genet. 113: 953–964.
-
(2006)
Theor. Appl. Genet
, vol.113
, pp. 953-964
-
-
Macmillan, K.1
Emrich, K.2
Piepho, H.P.3
Mullins, C.E.4
Price, A.H.5
-
57
-
-
0032778701
-
Effects of red to far‐red ratio and plant density on biomass allocation and gas exchange in Impatiens capensis
-
Maliakal, S.K., McDonnell, K., Dudley, S.A., and Schmitt, J. (1999). Effects of red to far‐red ratio and plant density on biomass allocation and gas exchange in Impatiens capensis. Int. J. Plant Sci. 160: 723–733.
-
(1999)
Int. J. Plant Sci
, vol.160
, pp. 723-733
-
-
Maliakal, S.K.1
McDonnell, K.2
Dudley, S.A.3
Schmitt, J.4
-
58
-
-
62549088774
-
A model selection approach for the identification of quantitative trait loci in experimental crosses, allowing epistasis
-
Manichaikul, A., Moon, J.Y., Sen, S., Yandell, B.S., and Broman, K.W. (2009). A model selection approach for the identification of quantitative trait loci in experimental crosses, allowing epistasis. Genetics 181: 1077–1086.
-
(2009)
Genetics
, vol.181
, pp. 1077-1086
-
-
Manichaikul, A.1
Moon, J.Y.2
Sen, S.3
Yandell, B.S.4
Broman, K.W.5
-
59
-
-
0038414035
-
Genetics of drought adaptation in Arabidopsis thaliana: I. Pleiotropy contributes to genetic correlations among ecological traits
-
McKay, J.K., Richards, J.H., and Mitchell-Olds, T. (2003). Genetics of drought adaptation in Arabidopsis thaliana: I. Pleiotropy contributes to genetic correlations among ecological traits. Mol. Ecol. 12: 1137–1151.
-
(2003)
Mol. Ecol
, vol.12
, pp. 1137-1151
-
-
McKay, J.K.1
Richards, J.H.2
Mitchell-Olds, T.3
-
60
-
-
57249105426
-
Genetics of drought adaptation in Arabidopsis thaliana II. QTL analysis of a new mapping population, KAS-1 x TSU-1
-
McKay, J.K., Richards, J.H., Nemali, K.S., Sen, S., Mitchell-Olds, T., Boles, S., Stahl, E.A., Wayne, T., and Juenger, T.E. (2008). Genetics of drought adaptation in Arabidopsis thaliana II. QTL analysis of a new mapping population, KAS-1 x TSU-1. Evolution 62: 3014–3026.
-
(2008)
Evolution
, vol.62
, pp. 3014-3026
-
-
McKay, J.K.1
Richards, J.H.2
Nemali, K.S.3
Sen, S.4
Mitchell-Olds, T.5
Boles, S.6
Stahl, E.A.7
Wayne, T.8
Juenger, T.E.9
-
61
-
-
0034817859
-
Drought-adaptive mechanisms involved in the escape/tolerance strategies of Arabidopsis Landsberg erecta and Columbia ecotypes and their F1 reciprocal progeny
-
Meyre, D., Leonardi, A., Brisson, G., and Vartanian, N. (2001). Drought-adaptive mechanisms involved in the escape/tolerance strategies of Arabidopsis Landsberg erecta and Columbia ecotypes and their F1 reciprocal progeny. J. Plant Physiol. 158: 1145–1152.
-
(2001)
J. Plant Physiol
, vol.158
, pp. 1145-1152
-
-
Meyre, D.1
Leonardi, A.2
Brisson, G.3
Vartanian, N.4
-
62
-
-
0034932991
-
The pathway of biosynthesis of abscisic acid in vascular plants: A review of the present state of knowledge of ABA biosynthesis
-
Milborrow, B.V. (2001). The pathway of biosynthesis of abscisic acid in vascular plants: a review of the present state of knowledge of ABA biosynthesis. J. Exp. Bot. 52: 1145–1164.
-
(2001)
J. Exp. Bot
, vol.52
, pp. 1145-1164
-
-
Milborrow, B.V.1
-
63
-
-
67650258730
-
Disentangling molecular relationships with a causal inference test
-
Millstein, J., Zhang, B., Zhu, J., and Schadt, E.E. (2009). Disentangling molecular relationships with a causal inference test. BMC Genet. 10: 23.
-
(2009)
BMC Genet
, vol.10
, pp. 23
-
-
Millstein, J.1
Zhang, B.2
Zhu, J.3
Schadt, E.E.4
-
64
-
-
38649095636
-
Physiological roles of plant glycoside hydrolases
-
Minic, Z. (2008). Physiological roles of plant glycoside hydrolases. Planta 227: 723–740.
-
(2008)
Planta
, vol.227
, pp. 723-740
-
-
Minic, Z.1
-
65
-
-
84866334229
-
Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops
-
Mir, R.R., Zaman-Allah, M., Sreenivasulu, N., Trethowan, R., and Varshney, R.K. (2012). Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops. Theor. Appl. Genet. 125: 625–645.
-
(2012)
Theor. Appl. Genet
, vol.125
, pp. 625-645
-
-
Mir, R.R.1
Zaman-Allah, M.2
Sreenivasulu, N.3
Trethowan, R.4
Varshney, R.K.5
-
66
-
-
84870284276
-
Causal graphical models in systems genetics: A unified framework for joint inference of causal network and genetic architecture for correlated phenotypes
-
Neto, E.C., Keller, M.P., Attie, A.D., and Yandell, B.S. (2010). Causal graphical models in systems genetics: a unified framework for joint inference of causal network and genetic architecture for correlated phenotypes. Ann. Appl. Stat. 4: 320–339.
-
(2010)
Ann. Appl. Stat
, vol.4
, pp. 320-339
-
-
Neto, E.C.1
Keller, M.P.2
Attie, A.D.3
Yandell, B.S.4
-
67
-
-
29444452921
-
Molecular signatures of natural selection
-
Nielsen, R. (2005). Molecular signatures of natural selection. Annu. Rev. Genet. 39: 197–218.
-
(2005)
Annu. Rev. Genet
, vol.39
, pp. 197-218
-
-
Nielsen, R.1
-
68
-
-
0031714655
-
The population genetics of adaptation: The distribution of factors fixed during adaptive evolution
-
Orr, H.A. (1998). The population genetics of adaptation: the distribution of factors fixed during adaptive evolution. Evolution 52: 935–949.
-
(1998)
Evolution
, vol.52
, pp. 935-949
-
-
Orr, H.A.1
-
69
-
-
79251480045
-
Photosynthesis and drought: Can we make metabolic connections from available data
-
Pinheiro, C., and Chaves, M.M. (2011). Photosynthesis and drought: can we make metabolic connections from available data? J. Exp. Bot. 62: 869–882.
-
(2011)
J. Exp. Bot
, vol.62
, pp. 869-882
-
-
Pinheiro, C.1
Chaves, M.M.2
-
70
-
-
77649153306
-
Breeding for improved water productivity in temperate cereals: Phenotyping, quantitative trait loci, markers and the selection environment
-
Richards, R.A., Rebetzke, G.J., Watt, M., Condon, A.G., Spielmeyer, W., and Dolferus, R. (2010). Breeding for improved water productivity in temperate cereals: phenotyping, quantitative trait loci, markers and the selection environment. Funct. Plant Biol. 37: 85–97.
-
(2010)
Funct. Plant Biol
, vol.37
, pp. 85-97
-
-
Richards, R.A.1
Rebetzke, G.J.2
Watt, M.3
Condon, A.G.4
Spielmeyer, W.5
Dolferus, R.6
-
71
-
-
84855258100
-
The QTN program and the alleles that matter for evolution: All that’s gold does not glitter
-
Rockman, M.V. (2012). The QTN program and the alleles that matter for evolution: all that’s gold does not glitter. Evolution 66: 1–17.
-
(2012)
Evolution
, vol.66
, pp. 1-17
-
-
Rockman, M.V.1
-
72
-
-
77954742816
-
Contrasting drought tolerance strategies in two desert annuals of hybrid origin
-
Rosenthal, D.M., Stiller, V., Sperry, J.S., and Donovan, L.A. (2010). Contrasting drought tolerance strategies in two desert annuals of hybrid origin. J. Exp. Bot. 61: 2769–2778.
-
(2010)
J. Exp. Bot
, vol.61
, pp. 2769-2778
-
-
Rosenthal, D.M.1
Stiller, V.2
Sperry, J.S.3
Donovan, L.A.4
-
73
-
-
22844446947
-
An integrative genomics approach to infer causal associations between gene expression and disease
-
Schadt, E.E., et al. (2005). An integrative genomics approach to infer causal associations between gene expression and disease. Nat. Genet. 37: 710–717.
-
(2005)
Nat. Genet
, vol.37
, pp. 710-717
-
-
Schadt, E.E.1
-
74
-
-
84910154850
-
The relationship between flowering time and growth responses to drought in the Arabidopsis Landsberg erecta x Antwerp-1 population
-
Schmalenbach, I., Zhang, L., Reymond, M., and Jiménez-Gómez, J.M. (2014). The relationship between flowering time and growth responses to drought in the Arabidopsis Landsberg erecta x Antwerp-1 population. Front. Plant Sci. 5: 609.
-
(2014)
Front. Plant Sci
, vol.5
, pp. 609
-
-
Schmalenbach, I.1
Zhang, L.2
Reymond, M.3
Jiménez-Gómez, J.M.4
-
75
-
-
1042267811
-
The adaptive evolution of plasticity: Phytochrome-mediated shade avoidance responses
-
Schmitt, J., Stinchcombe, J.R., Heschel, M.S., and Huber, H. (2003). The adaptive evolution of plasticity: phytochrome-mediated shade avoidance responses. Integr. Comp. Biol. 43: 459–469.
-
(2003)
Integr. Comp. Biol
, vol.43
, pp. 459-469
-
-
Schmitt, J.1
Stinchcombe, J.R.2
Heschel, M.S.3
Huber, H.4
-
76
-
-
0036007393
-
Complex regulation of ABA biosynthesis in plants
-
Seo, M., and Koshiba, T. (2002). Complex regulation of ABA biosynthesis in plants. Trends Plant Sci. 7: 41–48.
-
(2002)
Trends Plant Sci
, vol.7
, pp. 41-48
-
-
Seo, M.1
Koshiba, T.2
-
77
-
-
80052400919
-
Essential role of tissue-specific proline synthesis and catabolism in growth and redox balance at low water potential
-
Sharma, S., Villamor, J.G., and Verslues, P.E. (2011). Essential role of tissue-specific proline synthesis and catabolism in growth and redox balance at low water potential. Plant Physiol. 157: 292–304.
-
(2011)
Plant Physiol
, vol.157
, pp. 292-304
-
-
Sharma, S.1
Villamor, J.G.2
Verslues, P.E.3
-
78
-
-
33846853296
-
The adaptive significance of drought escape in Avena barbata, an annual grass
-
Sherrard, M.E., and Maherali, H. (2006). The adaptive significance of drought escape in Avena barbata, an annual grass. Evolution 60: 2478–2489.
-
(2006)
Evolution
, vol.60
, pp. 2478-2489
-
-
Sherrard, M.E.1
Maherali, H.2
-
79
-
-
0141725442
-
Regulatory network of gene expression in the drought and cold stress responses
-
Shinozaki, K., Yamaguchi-Shinozaki, K., and Seki, M. (2003). Regulatory network of gene expression in the drought and cold stress responses. Curr. Opin. Plant Biol. 6: 410–417.
-
(2003)
Curr. Opin. Plant Biol
, vol.6
, pp. 410-417
-
-
Shinozaki, K.1
Yamaguchi-Shinozaki, K.2
Seki, M.3
-
80
-
-
0002972764
-
Aridity as a stimulus to plant evolution
-
Stebbins, G.L. (1952). Aridity as a stimulus to plant evolution. Am. Nat. 86: 33–44.
-
(1952)
Am. Nat
, vol.86
, pp. 33-44
-
-
Stebbins, G.L.1
-
81
-
-
79960132878
-
Do large effect QTL fractionate? A case study at the maize domestication QTL teosinte branched1
-
Studer, A.J., and Doebley, J.F. (2011). Do large effect QTL fractionate? A case study at the maize domestication QTL teosinte branched1. Genetics 188: 673–681.
-
(2011)
Genetics
, vol.188
, pp. 673-681
-
-
Studer, A.J.1
Doebley, J.F.2
-
82
-
-
84877307931
-
Genetic, physiological, and gene expression analyses reveal that multiple QTL enhance yield of rice mega-variety IR64 under drought
-
Swamy, B.P.M., et al. (2013). Genetic, physiological, and gene expression analyses reveal that multiple QTL enhance yield of rice mega-variety IR64 under drought. PLoS ONE 8: e62795.
-
(2013)
Plos ONE
, vol.8
-
-
Swamy, B.1
-
83
-
-
75749084035
-
Proline: A multifunctional amino acid
-
Szabados, L., and Savouré, A. (2010). Proline: a multifunctional amino acid. Trends Plant Sci. 15: 89–97.
-
(2010)
Trends Plant Sci
, vol.15
, pp. 89-97
-
-
Szabados, L.1
Savouré, A.2
-
85
-
-
77954077605
-
Quantification of water stress-induced osmotic adjustment and proline accumulation for Arabidopsis thaliana molecular genetic studies
-
R. Sunkar, ed (New York: Springer Science+Business Media
-
Verslues, P.E. (2010). Quantification of water stress-induced osmotic adjustment and proline accumulation for Arabidopsis thaliana molecular genetic studies. In Plant Stress Tolerance: Methods in Molecular Biology 639, R. Sunkar, ed (New York: Springer Science+Business Media).
-
(2010)
Plant Stress Tolerance: Methods in Molecular Biology 639
-
-
Verslues, P.E.1
-
86
-
-
79957694634
-
Proline metabolism and its implications for plant-environment interaction
-
Verslues, P.E., and Sharma, S. (2010). Proline metabolism and its implications for plant-environment interaction. The Arabidopsis Book 8: e0140, doi/10.1199/tab.0140.
-
(2010)
The Arabidopsis Book
, vol.8
-
-
Verslues, P.E.1
Sharma, S.2
-
87
-
-
60149093076
-
Effects of genetic perturbation on seasonal life history plasticity
-
Wilczek, A.M., et al. (2009). Effects of genetic perturbation on seasonal life history plasticity. Science 323: 930–934.
-
(2009)
Science
, vol.323
, pp. 930-934
-
-
Wilczek, A.M.1
-
88
-
-
0027363428
-
Theoretical basis for separation of multiple linked gene effects in mapping quantitative trait loci
-
Zeng, Z.-B. (1993). Theoretical basis for separation of multiple linked gene effects in mapping quantitative trait loci. Proc. Natl. Acad. Sci. USA 90: 10972–10976.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 10972-10976
-
-
Zeng, Z.-B.1
-
89
-
-
33847296166
-
Genetic and epigenetic dissection of cis regulatory variation
-
Zhang, X., Richards, E.J., and Borevitz, J.O. (2007). Genetic and epigenetic dissection of cis regulatory variation. Curr. Opin. Plant Biol. 10: 142–148.
-
(2007)
Curr. Opin. Plant Biol
, vol.10
, pp. 142-148
-
-
Zhang, X.1
Richards, E.J.2
Borevitz, J.O.3
|