Molecular epidemiology of hepatitis A virus infection in Northeast India

Journal of Medical Virology

Volumn 87, Issue 7, 2015, Pages 1218-1224

  Bose, Moumita ^a   Bose, Sujoy ^a   Saikia, Anjan ^b   Medhi, Subhash ^a   Deka, Manab ^a  

^a GAUHATI UNIVERSITY   (India)

^b Medical and Gastroenterology Unit   (India)

Author keywords

Genotype; Hepatitis A virus; Liver disease; Molecular epidemiology; Northeast India

Indexed keywords

IMMUNOGLOBULIN M; VIRUS RNA; VIRUS ANTIBODY;

ADOLESCENT; ADULT; ARTICLE; CHILD; COMPUTER PROGRAM; DISEASE SEVERITY; FEMALE; GENOTYPE; HEPATITIS; HEPATITIS A VIRUS; HUMAN; INDIA; INFORMED CONSENT; JAUNDICE; LIVER DISEASE; MAJOR CLINICAL STUDY; MALE; MEDICAL INFORMATION; MIDDLE AGED; MIXED INFECTION; MOLECULAR EPIDEMIOLOGY; PHYLOGENY; POLYMERASE CHAIN REACTION; PRESCHOOL CHILD; PREVALENCE; REAL TIME POLYMERASE CHAIN REACTION; SCHOOL CHILD; STATISTICAL ANALYSIS; VIRUS HEPATITIS; VIRUS INFECTION; AGED; BLOOD; CLASSIFICATION; COMPLICATION; GENETICS; HEPATITIS A; IMMUNOLOGY; LIVER FAILURE, ACUTE; VIROLOGY; YOUNG ADULT;

HEPATITIS A VIRUS; HEPATITIS B VIRUS;

ADOLESCENT; ADULT; AGED; ANTIBODIES, VIRAL; CHILD; CHILD, PRESCHOOL; FEMALE; GENOTYPE; HEPATITIS A; HEPATITIS A VIRUS; HUMANS; IMMUNOGLOBULIN M; INDIA; LIVER FAILURE, ACUTE; MALE; MIDDLE AGED; PHYLOGENY; RNA, VIRAL; YOUNG ADULT;

EID: 84928768194     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.24168     Document Type: Article

References (33)

1. Acharya SK, Batra Y, Bhatkal B, Ojha B, Kaur K, Hazari S, Saraya A, Panda SK. 2003. Seroepidemiology of hepatitis a virus infection among school children in Delhi and north Indian patients with chronic liver disease: Implications for HAV vaccination. J Gastroenterol Hepatol 18:822-827.
2. Arauz-ruiz P, Sundqvist L, Garcia Z, Taylor L, Visona K, Norder H, Magnius LO. 2001. Presumed common source outbreaks of hepatitis A in an endemic area confirmed by limited sequencing within the VP1 region. J Med Virol 65:449-456.
3. Ceyhan M, Yildirim I, Kurt N, Uysal G, Dikici B, Ecevit C, Aydogan A, Koc A, Yasa O, Koseoglu M, Onal K, Hacimustafaoglu M, Celebi S. 2008. Differences in hepatitis A seroprevalence among geographical regions in Turkey: A need for regional vaccination recommendations. J Viral Hepat 15:69-72.
4. Chadha MS, Chtambar SD, Shaikh NJ, Arankalle VA. 1999. Exposure of Indian children to hepatitis A virus and vaccination age. Ind J Med Res 9:11-15.
5. Chadha MS, Lole KS, Bora MH, Arankalle VA. 2009. Outbreaks of hepatitis A among children in western India. Trans R Soc Trop Med Hyg 103:911-916.
6. Cohen JI, Ticehurst JR, Purcell RH, Buckler-white A, Baroudy BM. 1987. Complete nucleotide sequence of wild type hepatitis A virus: Comparison with different strains of hepatitis A virus and other picornaviruses. J Virol 61:50-59.
7. Coppola N, Genovese D, Pisaturo M, Taffon S, Argentini C, Pasquale G, Sagnelli C, Piccinino F, Rapicetta M, Sagnelli E. 2007. Acute hepatitis with severe cholestasis and prolonged clinical course due to hepatitis A virus Ia and Ib coinfection. Clin Infect Dis 44:e73-e77.
8. Costa-mattioli M, Cristina J, Romero H, Perez-Bercof R, Casane D, Colina R, Garcia L, Vega I, Glikman G, Romanowsky V, Castello A, Nicand E, Gassin M, Billaudel S, Ferré V. 2002. Molecular evolution of hepatitis A virus: A new classification based on the complete VP1 protein. J Virol 76:9516-9525.
9. Deka M, Bose M, Baruah B, Bose PD, Medhi S, Bose S, Saikia A, Kar P. 2010. Oct Role of CYP2E1 gene polymorphisms association with hepatitis risk in Northeast India World J Gastroenterol 14:4800-4808.
10. Evangelos A, Akriviadis EA, Redker AG. 1989. Fulminant hepatitis A in intravenous drug users with chronic liver disease. Ann Intern Med 110:838.
11. Fujiwara K, Yokosuka O, Ehata T, Saisho H, Saotome N, Suzuki K, Okita K, Kiyosawa K, Omata M. 2002. Association between severity of type A hepatitis and nucleotide variations in the 5′ non-translated region of hepatitis A virus RNA: strains from fulminant hepatitis have fewer nucleotide substitutions. Gut 5:82-888.
12. Fujiwara K, Yokosuka O, Imazeki F, Saisho H, Saotome N, Suzuki K, Okita K, Tanaka E, Omata M. 2003. Analysis of the genotype determining region of hepatitis A viral RNA in relation to disease severities. Hepatol Res 25:124-134.
13. Gadgil PS, Fadnis RS, Joshi MS, Rao PS, Chitambar SD. 2008. Mar. Seroepidemiology of hepatitis A in voluntary blood donors from Pune, western India (2002 and 2004-2005) Epidemiol Infect 136:406-409.
14. Hollinger FB, Ticehurst JR. 1990. Hepatitis A virus. In: Fields BN, Knipe DM, Chanock RM, Hirsch MS, Melnick JL, Monath TP, Roizman B, editors. Virology. 2nd edition. New York: Raven Press, pp 631-667.
15. Hussain Z, Das BC, Husain SA, Asim M, Chattopadhyay S, Malik A, Poovorawan Y, Theamboonlers A, Kar P. 2005. May. Hepatitis A viral genotypes and clinical relevance: Clinical and molecular characterization of hepatitis A virus isolates from northern India Hepatol Res 32:16-24.
16. Hussain Z, Das BC, Husain SA, Polipalli SK, Ahmed T, Begum N, Medhi S, Verghese A, Raish M, Theamboonlers A, Poovorawan Y, Kar P. 2006. Virological course of hepatitis A virus as determined by real time RT-PCR: Correlation with biochemical, immunological and genotypic profiles. World J Gastroenterol 12:4683-4688.
17. Jansen RW, Siegl G, Lemon SM. 1990. Molecular epidemiology of human hepatitis A virus defined by an antigen-capture polymerase chain reaction method. Proc Natl Acad Sci U S A 87:2867-2871.
18. John A, Chatni S, Narayanan VA, Balakrishnan V, Nair P. 2009. Seroprevalence of hepatitis A virus in patients with chronic liver disease from Kerala: Impact on vaccination policy J Indian Med Assoc 107:859-861.
19. Kanda T, Jeong SH, Imazeki F, Fujiwara K, Yokosuka O. 2010. Analysis of 5′ non-translated region of hepatitis A viral RNA genotype I from South Korea: Comparison with disease severities. PLoS ONE 5:e15139.
20. Kanda T, Yokosuka O, Kato N, Imazeki F, Fujiwara K, Kawai S, Saisho H, Omata M. 2003. Hepatitis A virus VP3 may activate serum response element associated transcription. Scand J Gastroenterol 38:307-313.
21. Khanna B, Spelbring JE, Innis BL, Robertson BH. 1992. Characterization of a genetic variant of human hepatitis A virus. J Med Virol 36:118-124.
22. Mathiesen LR, Skinoj P, Nielsen JO, Parcell RH, Wong D, Ranek L. 1980. Hepatitis type A, B and non A non B in fulminant hepatitis. Gut 21:72-77.
23. Mathur P, Arora NK. 2008. Epidemiological transition of hepatitis A in India: Issues for vaccination in developing countries Indian J Med Res 128:699-704.
24. Normann A, Jung C, Vallbracht A, Flehmig B. 2004. Time course of hepatitis A viremia and viral load in the blood of human hepatitis A patients. J Med Virol 72:10-16.
25. Rath CP, Akki A, Patil SV, Kalyanshettar SS. 2011. Jan. Seroprevalence of hepatitis A virus antibody in Bijapur, Karnataka Indian Pediatr 48:71-73.
26. Rezende G, Roque-afonso AM, Samuel D, Gigou M, Nicand E, Ferre V, Dussaix E, Bismuth H, Féray C. 2003. Viral and clinical factors associated with the fulminant course of hepatitis A infection. Hepatology 38:613-618.
27. Robertson BH, Jansen RW, Khanna B, Totsuka A, Nainan OV, Siegl G, Widell A, Margolis HS, Isomura S, Ito K, Ishizo T, Moritsugu Y, Lemon SM. 1992. Genetic relatedness of hepatitis A virus strains recovered from different geographical regions. J Gen Virol 73:1365-1377.
28. Schwarz KS, Balistreri WF. 2002. Viral hepatitis. J Pediatr.Gastroenterol Nutr 35:29-32.
29. Tjon GM, Coutinho RA, van den Hoek A, Esman S, Wijkmans CJ, Hoebe CJ, Wolters B, Swaan C, Geskus RB, Dukers N, Bruisten SM. 2006. High and persistent excretion of hepatitis A virus in immunocompetent patients. J Med Virol 78:1398-1405.
30. Vaidya SR, Chitambar SD, Arankalle VA. 2002. Polymerase chain reaction base prevalence of hepatitis A, hepatitis E endemic area. J Hepatol 37:131-136.
31. World Health Organization 2010. The global prevalence of hepatitis A virus infection and susceptibility: A systematic review. WHO/IVB/10.01 (available at: http://whqlibdoc.who.int/hq/2010/WHO_IVB_10.01_eng.pdf).
32. Yoon YK, Yeon JE, Kim JH, Park D, Sohn JW, Chun BC, Kim M. 2011. Comparative analysis of disease severity between genotypes IA and IIIA of hepatitis A virus. J Med Virol 83:1308-1314.
33. Yotsuyanagi H, Koike K, Yasuda K, Moriya K, Shintani Y, Fujie H, Kurokawa K, Iino S. 1996. Prolonged fecal excretion of hepatitis A virus in adult patients with hepatitis A as determined by polymerase chain reaction. Hepatology 24:10-13.