-
1
-
-
0020479406
-
The site of action of alpha-sarcin on eukaryotic ribosomes. The sequence at the alpha-sarcin cleavage site in 28S ribosomal ribonucleic acid
-
Endo, Y. & Wool, I. G. The site of action of alpha-sarcin on eukaryotic ribosomes. The sequence at the alpha-sarcin cleavage site in 28S ribosomal ribonucleic acid. J. Biol. Chem. 257, 9054-9060 (1982).
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 9054-9060
-
-
Endo, Y.1
Wool, I.G.2
-
2
-
-
0023664263
-
The mechanism of action of ricin and related toxic lectins on eukaryotic ribosomes. The site and the characteristics of the modification in 28S ribosomal RNA caused by the toxins
-
Endo, Y., Mitsui, K., Motizuki, M. & Tsurugi, K. The mechanism of action of ricin and related toxic lectins on eukaryotic ribosomes. The site and the characteristics of the modification in 28S ribosomal RNA caused by the toxins. J. Biol. Chem. 262, 5908-5912 (1987).
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 5908-5912
-
-
Endo, Y.1
Mitsui, K.2
Motizuki, M.3
Tsurugi, K.4
-
3
-
-
27144474752
-
The Kluyveromyces lactis gamma-toxin targets tRNA anticodons
-
Lu, J., Huang, B., Esberg, A., Johansson, M. J. & Bystrom, A. S. The Kluyveromyces lactis gamma-toxin targets tRNA anticodons. RNA 11, 1648-1654 (2005).
-
(2005)
RNA
, vol.11
, pp. 1648-1654
-
-
Lu, J.1
Huang, B.2
Esberg, A.3
Johansson, M.J.4
Bystrom, A.S.5
-
4
-
-
46949090025
-
The primary target of the killer toxin from Pichia acaciae is tRNA(Gln)
-
Klassen, R. et al. The primary target of the killer toxin from Pichia acaciae is tRNA(Gln). Mol. Microbiol. 69, 681-697 (2008).
-
(2008)
Mol. Microbiol.
, vol.69
, pp. 681-697
-
-
Klassen, R.1
-
5
-
-
84899630852
-
Structure, mechanism, and specificity of a eukaryal tRNA restriction enzyme involved in self-nonself discrimination
-
Chakravarty, A. K., Smith, P., Jalan, R. & Shuman, S. Structure, mechanism, and specificity of a eukaryal tRNA restriction enzyme involved in self-nonself discrimination. Cell Rep. 7, 339-347 (2014).
-
(2014)
Cell Rep.
, vol.7
, pp. 339-347
-
-
Chakravarty, A.K.1
Smith, P.2
Jalan, R.3
Shuman, S.4
-
6
-
-
80053474881
-
Toxins-antitoxins: Diversity, evolution and function
-
Hayes, F. & Van Melderen, L. Toxins-antitoxins: diversity, evolution and function. Crit. Rev. Biochem. Mol. Biol. 46, 386-408 (2011).
-
(2011)
Crit. Rev. Biochem. Mol. Biol.
, vol.46
, pp. 386-408
-
-
Hayes, F.1
Van Melderen, L.2
-
7
-
-
22544481439
-
Phage abortive infection in lactococci: Variations on a theme
-
Chopin, M. C., Chopin, A. & Bidnenko, E. Phage abortive infection in lactococci: variations on a theme. Curr. Opin. Microbiol. 8, 473-479 (2005).
-
(2005)
Curr. Opin. Microbiol.
, vol.8
, pp. 473-479
-
-
Chopin, M.C.1
Chopin, A.2
Bidnenko, E.3
-
8
-
-
84862602464
-
Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics
-
Zhang, D., de Souza, R. F., Anantharaman, V., Iyer, L. M. & Aravind, L. Polymorphic toxin systems: comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics. Biol. Direct 7, 18 (2012).
-
(2012)
Biol. Direct
, vol.7
, pp. 18
-
-
Zhang, D.1
De Souza, R.F.2
Anantharaman, V.3
Iyer, L.M.4
Aravind, L.5
-
9
-
-
80052196405
-
Diversity of bacterial type II toxin-antitoxin systems: A comprehensive search and functional analysis of novel families
-
Leplae, R. et al. Diversity of bacterial type II toxin-antitoxin systems: a comprehensive search and functional analysis of novel families. Nucleic Acids Res. 39, 5513-5525 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 5513-5525
-
-
Leplae, R.1
-
10
-
-
84877836829
-
Ribonucleases in bacterial toxin-antitoxin systems
-
Cook, G. M. et al. Ribonucleases in bacterial toxin-antitoxin systems. Biochim. Biophys. Acta 1829, 523-531 (2013).
-
(2013)
Biochim. Biophys. Acta
, vol.1829
, pp. 523-531
-
-
Cook, G.M.1
-
11
-
-
84878893667
-
Comprehensive analysis of the HEPN superfamily: Identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing
-
Anantharaman, V., Makarova, K. S., Burroughs, A. M., Koonin, E. V. &Aravind, L. Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing. Biol. Direct 8, 15 (2013).
-
(2013)
Biol. Direct
, vol.8
, pp. 15
-
-
Anantharaman, V.1
Makarova, K.S.2
Burroughs, A.M.3
Koonin, E.V.4
Aravind, L.5
-
12
-
-
1942533451
-
Distant structural homology leads to the functional characterization of an archaeal PIN domain as an exonuclease
-
Arcus, V. L., Backbro, K., Roos, A., Daniel, E. L. & Baker, E. N. Distant structural homology leads to the functional characterization of an archaeal PIN domain as an exonuclease. J. Biol. Chem. 279, 16471-16478 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16471-16478
-
-
Arcus, V.L.1
Backbro, K.2
Roos, A.3
Daniel, E.L.4
Baker, E.N.5
-
13
-
-
0033605708
-
A cytotoxic ribonuclease targeting specific transfer RNA anticodons
-
Ogawa, T. et al. A cytotoxic ribonuclease targeting specific transfer RNA anticodons. Science 283, 2097-2100 (1999).
-
(1999)
Science
, vol.283
, pp. 2097-2100
-
-
Ogawa, T.1
-
14
-
-
0027724879
-
Functional expression and properties of the tRNA(Lys)-specific core anticodon nuclease encoded by Escherichia coli prrC
-
Morad, I., Chapman-Shimshoni, D., Amitsur, M. & Kaufmann, G. Functional expression and properties of the tRNA(Lys)-specific core anticodon nuclease encoded by Escherichia coli prrC. J. Biol. Chem. 268, 26842-26849 (1993).
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 26842-26849
-
-
Morad, I.1
Chapman-Shimshoni, D.2
Amitsur, M.3
Kaufmann, G.4
-
15
-
-
0035930345
-
Crystal structure of colicin E3: Implications for cell entry and ribosome inactivation
-
Soelaiman, S., Jakes, K., Wu, N., Li, C. & Shoham, M. Crystal structure of colicin E3: implications for cell entry and ribosome inactivation. Mol. Cell 8, 1053-1062 (2001).
-
(2001)
Mol. Cell
, vol.8
, pp. 1053-1062
-
-
Soelaiman, S.1
Jakes, K.2
Wu, N.3
Li, C.4
Shoham, M.5
-
16
-
-
0034682503
-
A cytotoxic ribonuclease which specifically cleaves four isoaccepting arginine tRNAs at their anticodon loops
-
Tomita, K., Ogawa, T., Uozumi, T., Watanabe, K. & Masaki, H. A cytotoxic ribonuclease which specifically cleaves four isoaccepting arginine tRNAs at their anticodon loops. Proc. Natl Acad. Sci. USA 97, 8278-8283 (2000).
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 8278-8283
-
-
Tomita, K.1
Ogawa, T.2
Uozumi, T.3
Watanabe, K.4
Masaki, H.5
-
17
-
-
0037428226
-
The bacterial toxin RelE displays codon-specific cleavage of mRNAs in the ribosomal A site
-
Pedersen, K. et al. The bacterial toxin RelE displays codon-specific cleavage of mRNAs in the ribosomal A site. Cell 112, 131-140 (2003).
-
(2003)
Cell
, vol.112
, pp. 131-140
-
-
Pedersen, K.1
-
18
-
-
71149087505
-
The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE
-
Neubauer, C. et al. The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE. Cell 139, 1084-1095 (2009).
-
(2009)
Cell
, vol.139
, pp. 1084-1095
-
-
Neubauer, C.1
-
19
-
-
37649005671
-
MazF, an mRNA interferase, mediates programmed cell death during multicellular Myxococcus development
-
Nariya, H. & Inouye, M. MazF, an mRNA interferase, mediates programmed cell death during multicellular Myxococcus development. Cell 132, 55-66 (2008).
-
(2008)
Cell
, vol.132
, pp. 55-66
-
-
Nariya, H.1
Inouye, M.2
-
20
-
-
0023388202
-
Bacteriophage T4 anticodon nuclease, polynucleotide kinase and RNA ligase reprocess the host lysine tRNA
-
Amitsur, M., Levitz, R. & Kaufmann, G. Bacteriophage T4 anticodon nuclease, polynucleotide kinase and RNA ligase reprocess the host lysine tRNA. EMBO J. 6, 2499-2503 (1987).
-
(1987)
EMBO J.
, vol.6
, pp. 2499-2503
-
-
Amitsur, M.1
Levitz, R.2
Kaufmann, G.3
-
21
-
-
23644456852
-
An end-healing enzyme from Clostridium thermocellum with 5' kinase, 2',3' phosphatase, and adenylyltransferase activities
-
Martins, A. & Shuman, S. An end-healing enzyme from Clostridium thermocellum with 5' kinase, 2',3' phosphatase, and adenylyltransferase activities. RNA 11, 1271-1280 (2005).
-
(2005)
RNA
, vol.11
, pp. 1271-1280
-
-
Martins, A.1
Shuman, S.2
-
22
-
-
70349847853
-
Reconstituting bacterial RNA repair and modification in vitro
-
Chan, C. M., Zhou, C. & Huang, R. H. Reconstituting bacterial RNA repair and modification in vitro. Science 326, 247 (2009).
-
(2009)
Science
, vol.326
, pp. 247
-
-
Chan, C.M.1
Zhou, C.2
Huang, R.H.3
-
23
-
-
84863155474
-
The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family
-
Smith, P., Wang, L. K., Nair, P. A. & Shuman, S. The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family. Proc. Natl Acad. Sci. USA 109, 2296-2301 (2012).
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 2296-2301
-
-
Smith, P.1
Wang, L.K.2
Nair, P.A.3
Shuman, S.4
-
24
-
-
84861359020
-
Molecular basis of bacterial protein Hen1 activating the ligase activity of bacterial protein Pnkp for RNA repair
-
Wang, P. et al. Molecular basis of bacterial protein Hen1 activating the ligase activity of bacterial protein Pnkp for RNA repair. Proc. Natl Acad. Sci. USA 109, 13248-13253 (2012).
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 13248-13253
-
-
Wang, P.1
-
25
-
-
84862936702
-
Probing the substrate specificity of the bacterial Pnkp/Hen1 RNA repair system using synthetic RNAs
-
Zhang, C., Chan, C. M., Wang, P. & Huang, R. H. Probing the substrate specificity of the bacterial Pnkp/Hen1 RNA repair system using synthetic RNAs. RNA 18, 335-344 (2012).
-
(2012)
RNA
, vol.18
, pp. 335-344
-
-
Zhang, C.1
Chan, C.M.2
Wang, P.3
Huang, R.H.4
-
26
-
-
56649103902
-
Searching protein structure databases with DaliLite v.3
-
Holm, L., Kaariainen, S., Rosenstrom, P. & Schenkel, A. Searching protein structure databases with DaliLite v.3. Bioinformatics 24, 2780-2781 (2008).
-
(2008)
Bioinformatics
, vol.24
, pp. 2780-2781
-
-
Holm, L.1
Kaariainen, S.2
Rosenstrom, P.3
Schenkel, A.4
-
27
-
-
0036711227
-
Structure of a tRNA repair enzyme and molecular biology workhorse: T4 polynucleotide kinase
-
Galburt, E. A., Pelletier, J., Wilson, G. & Stoddard, B. L. Structure of a tRNA repair enzyme and molecular biology workhorse: T4 polynucleotide kinase. Structure 10, 1249-1260 (2002).
-
(2002)
Structure
, vol.10
, pp. 1249-1260
-
-
Galburt, E.A.1
Pelletier, J.2
Wilson, G.3
Stoddard, B.L.4
-
28
-
-
1342327713
-
Recognition of DNA substrates by T4 bacteriophage polynucleotide kinase
-
Eastberg, J. H., Pelletier, J. & Stoddard, B. L. Recognition of DNA substrates by T4 bacteriophage polynucleotide kinase. Nucleic Acids Res. 32, 653-660 (2004).
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 653-660
-
-
Eastberg, J.H.1
Pelletier, J.2
Stoddard, B.L.3
-
29
-
-
34548151225
-
Structure-function analysis of the 3' phosphatase component of T4 polynucleotide kinase/phosphatase
-
Zhu, H., Smith, P., Wang, L. K. & Shuman, S. Structure-function analysis of the 3' phosphatase component of T4 polynucleotide kinase/phosphatase. Virology 366, 126-136 (2007).
-
(2007)
Virology
, vol.366
, pp. 126-136
-
-
Zhu, H.1
Smith, P.2
Wang, L.K.3
Shuman, S.4
-
30
-
-
80555144193
-
The structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase
-
Garces, F., Pearl, L. H. & Oliver, A. W. The structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase. Mol. Cell 44, 385-396 (2011).
-
(2011)
Mol. Cell
, vol.44
, pp. 385-396
-
-
Garces, F.1
Pearl, L.H.2
Oliver, A.W.3
-
31
-
-
70349939426
-
Structural insights into mechanisms of the small RNA methyltransferase HEN1
-
Huang, Y. et al. Structural insights into mechanisms of the small RNA methyltransferase HEN1. Nature 461, 823-827 (2009).
-
(2009)
Nature
, vol.461
, pp. 823-827
-
-
Huang, Y.1
-
32
-
-
0034303273
-
Microbial composition of supra- and subgingival plaque in subjects with adult periodontitis
-
Ximenez-Fyvie, L. A., Haffajee, A. D. & Socransky, S. S. Microbial composition of supra- and subgingival plaque in subjects with adult periodontitis. J. Clin. Periodontol. 27, 722-732 (2000).
-
(2000)
J. Clin. Periodontol.
, vol.27
, pp. 722-732
-
-
Ximenez-Fyvie, L.A.1
Haffajee, A.D.2
Socransky, S.S.3
-
33
-
-
33645906591
-
Molecular identification of an invasive gingival bacterial community
-
Fredricks, D. N., Schubert, M. M. & Myerson, D. Molecular identification of an invasive gingival bacterial community. Clin. Infect. Dis. 41, e1-e4 (2005).
-
(2005)
Clin. Infect. Dis.
, vol.41
, pp. e1-e4
-
-
Fredricks, D.N.1
Schubert, M.M.2
Myerson, D.3
-
34
-
-
33845669624
-
A three-year prospective study of adult subjects with gingivitis II: Microbiological parameters
-
Teles, R. P. et al. A three-year prospective study of adult subjects with gingivitis II: microbiological parameters. J. Clin. Periodontol. 34, 7-17 (2007).
-
(2007)
J. Clin. Periodontol.
, vol.34
, pp. 7-17
-
-
Teles, R.P.1
-
36
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams, P. D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D Biol. Crystallogr. 66, 213-221 (2010).
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
|