메뉴 건너뛰기




Volumn 74, Issue 3, 2015, Pages

High-density genotyping of immune loci in Koreans and Europeans identifies eight new rheumatoid arthritis risk loci

(42)  Kim, Kwangwoo a,b,c   Bang, So Young a   Lee, Hye Soon a   Cho, Soo Kyung a   Choi, Chan Bum a   Sung, Yoon Kyoung a   Kim, Tae Hwan a   Jun, Jae Bum a   Yoo, Dae Hyun a   Kang, Young Mo d   Kim, Seong Kyu e   Suh, Chang Hee f   Shim, Seung Cheol g   Lee, Shin Seok h   Lee, Jisoo i   Chung, Won Tae j   Choe, Jung Yoon e   Shin, Hyoung Doo k   Lee, Jong Young l   Han, Bok Ghee l   more..


Author keywords

[No Author keywords available]

Indexed keywords

CYCLIC CITRULLINATED PEPTIDE ANTIBODY;

EID: 84928106416     PISSN: 00034967     EISSN: 14682060     Source Type: Journal    
DOI: 10.1136/annrheumdis-2013-204749     Document Type: Article
Times cited : (102)

References (44)
  • 2
    • 0034121235 scopus 로고    scopus 로고
    • Characterizing the quantitative genetic contribution to rheumatoid arthritis using data from twins
    • MacGregor AJ, Snieder H, Rigby AS, et al. Characterizing the quantitative genetic contribution to rheumatoid arthritis using data from twins. Arthritis Rheum 2000;43:30-7.
    • (2000) Arthritis Rheum , vol.43 , pp. 30-37
    • Macgregor, A.J.1    Snieder, H.2    Rigby, A.S.3
  • 3
    • 84862809846 scopus 로고    scopus 로고
    • Meta-analysis identifies nine new loci associated with rheumatoid arthritis in the Japanese population
    • Okada Y, Terao C, Ikari K, et al. Meta-analysis identifies nine new loci associated with rheumatoid arthritis in the Japanese population. Nat Genet 2012;44:511-16.
    • (2012) Nat Genet , vol.44 , pp. 511-516
    • Okada, Y.1    Terao, C.2    Ikari, K.3
  • 4
    • 84870531924 scopus 로고    scopus 로고
    • High-density genetic mapping identifies new susceptibility loci for rheumatoid arthritis
    • Eyre S, Bowes J, Diogo D, et al. High-density genetic mapping identifies new susceptibility loci for rheumatoid arthritis. Nat Genet 2012;44:1336-40.
    • (2012) Nat Genet , vol.44 , pp. 1336-1340
    • Eyre, S.1    Bowes, J.2    Diogo, D.3
  • 5
  • 6
    • 84860333083 scopus 로고    scopus 로고
    • Bayesian inference analyses of the polygenic architecture of rheumatoid arthritis
    • Stahl EA, Wegmann D, Trynka G, et al. Bayesian inference analyses of the polygenic architecture of rheumatoid arthritis. Nat Genet 2012;44:483-9.
    • (2012) Nat Genet , vol.44 , pp. 483-489
    • Stahl, E.A.1    Wegmann, D.2    Trynka, G.3
  • 7
    • 84879655915 scopus 로고    scopus 로고
    • High trans-ethnic replicability of GWAS results implies common causal variants
    • Marigorta UM, Navarro A. High Trans-ethnic Replicability of GWAS Results Implies Common Causal Variants. PLoS Genet 2013;9:e1003566.
    • (2013) PLoS Genet , vol.9 , pp. e1003566
    • Marigorta, U.M.1    Navarro, A.2
  • 8
    • 79953705986 scopus 로고    scopus 로고
    • Genome-wide association study of rheumatoid arthritis in Koreans: Population-specific loci as well as overlap with European susceptibility loci
    • Freudenberg J, Lee HS, Han BG, et al. Genome-wide association study of rheumatoid arthritis in Koreans: population-specific loci as well as overlap with European susceptibility loci. Arthritis Rheum 2011;63:884-93.
    • (2011) Arthritis Rheum , vol.63 , pp. 884-893
    • Freudenberg, J.1    Lee, H.S.2    Han, B.G.3
  • 9
    • 84871952176 scopus 로고    scopus 로고
    • Improved whole-chromosome phasing for disease and population genetic studies
    • Delaneau O, Zagury JF, Marchini J. Improved whole-chromosome phasing for disease and population genetic studies. Nat Methods 2013;10:5-6.
    • (2013) Nat Methods , vol.10 , pp. 5-6
    • Delaneau, O.1    Zagury, J.F.2    Marchini, J.3
  • 10
    • 67651222400 scopus 로고    scopus 로고
    • A flexible and accurate genotype imputation method for the next generation of genome-wide association studies
    • Howie BN, Donnelly P, Marchini J. A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet 2009;5:e1000529.
    • (2009) PLoS Genet , vol.5 , pp. e1000529
    • Howie, B.N.1    Donnelly, P.2    Marchini, J.3
  • 11
    • 78149265272 scopus 로고    scopus 로고
    • Robust relationship inference in genome-wide association studies
    • Manichaikul A, Mychaleckyj JC, Rich SS, et al. Robust relationship inference in genome-wide association studies. Bioinformatics 2010;26:2867-73.
    • (2010) Bioinformatics , vol.26 , pp. 2867-2873
    • Manichaikul, A.1    Mychaleckyj, J.C.2    Rich, S.S.3
  • 12
    • 84897031686 scopus 로고    scopus 로고
    • Genetics of rheumatoid arthritis contributes to biology and drug discovery
    • published online on Dec 25
    • Okada Y, Wu D, Trynka G, et al. Genetics of rheumatoid arthritis contributes to biology and drug discovery. Nature 2013 published online on Dec 25.
    • (2013) Nature
    • Okada, Y.1    Wu, D.2    Trynka, G.3
  • 13
    • 78649508578 scopus 로고    scopus 로고
    • MaCH: Using sequence and genotype data to estimate haplotypes and unobserved genotypes
    • Li Y, Willer CJ, Ding J, et al. MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes. Genet Epidemiol 2010;34:816-34.
    • (2010) Genet Epidemiol , vol.34 , pp. 816-834
    • Li, Y.1    Willer, C.J.2    Ding, J.3
  • 14
    • 84864417548 scopus 로고    scopus 로고
    • Fast and accurate genotype imputation in genome-wide association studies through pre-phasing
    • Howie B, Fuchsberger C, Stephens M, et al. Fast and accurate genotype imputation in genome-wide association studies through pre-phasing. Nat Genet 2012;44:955-9.
    • (2012) Nat Genet , vol.44 , pp. 955-959
    • Howie, B.1    Fuchsberger, C.2    Stephens, M.3
  • 15
    • 34548292504 scopus 로고    scopus 로고
    • PLINK: A tool set for whole-genome association and population-based linkage analyses
    • Purcell S, Neale B, Todd-Brown K, et al. PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 2007;81:559-75.
    • (2007) Am J Hum Genet , vol.81 , pp. 559-575
    • Purcell, S.1    Neale, B.2    Todd-Brown, K.3
  • 16
    • 77952714079 scopus 로고    scopus 로고
    • GWAMA: Software for genome-wide association meta-analysis
    • Magi R, Morris AP. GWAMA: software for genome-wide association meta-analysis. BMC Bioinformatics 2010;11:288.
    • (2010) BMC Bioinformatics , vol.11 , pp. 288
    • Magi, R.1    Morris, A.P.2
  • 17
    • 84858779229 scopus 로고    scopus 로고
    • HaploReg: A resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants
    • Ward LD, Kellis M. HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants. Nucleic Acids Res 2012;40:D930-4.
    • (2012) Nucleic Acids Res , vol.40 , pp. D930-D934
    • Ward, L.D.1    Kellis, M.2
  • 18
    • 84866871814 scopus 로고    scopus 로고
    • Mapping cis- and trans-regulatory effects across multiple tissues in twins
    • Grundberg E, Small KS, Hedman AK, et al. Mapping cis- and trans-regulatory effects across multiple tissues in twins. Nat Genet 2012;44:1084-9.
    • (2012) Nat Genet , vol.44 , pp. 1084-1089
    • Grundberg, E.1    Small, K.S.2    Hedman, A.K.3
  • 19
    • 84860596557 scopus 로고    scopus 로고
    • Patterns of cis regulatory variation in diverse human populations
    • Stranger BE, Montgomery SB, Dimas AS, et al. Patterns of cis regulatory variation in diverse human populations. PLoS Genet 2012;8:e1002639.
    • (2012) PLoS Genet , vol.8 , pp. e1002639
    • Stranger, B.E.1    Montgomery, S.B.2    Dimas, A.S.3
  • 20
    • 77957232748 scopus 로고    scopus 로고
    • Genevar: A database and Java application for the analysis and visualization of SNP-gene associations in eQTL studies
    • Yang TP, Beazley C, Montgomery SB, et al. Genevar: a database and Java application for the analysis and visualization of SNP-gene associations in eQTL studies. Bioinformatics 2010;26:2474-6.
    • (2010) Bioinformatics , vol.26 , pp. 2474-2476
    • Yang, T.P.1    Beazley, C.2    Montgomery, S.B.3
  • 21
    • 59649090974 scopus 로고    scopus 로고
    • Genetic risk factors for rheumatoid arthritis differ in Caucasian and Korean populations
    • Lee HS, Korman BD, Le JM, et al. Genetic risk factors for rheumatoid arthritis differ in Caucasian and Korean populations. Arthritis Rheum 2009;60:364-71.
    • (2009) Arthritis Rheum , vol.60 , pp. 364-371
    • Lee, H.S.1    Korman Le, B.D.J.M.2
  • 22
    • 84866924593 scopus 로고    scopus 로고
    • Dense fine-mapping study identifies new susceptibility loci for primary biliary cirrhosis
    • Liu JZ, Almarri MA, Gaffney DJ, et al. Dense fine-mapping study identifies new susceptibility loci for primary biliary cirrhosis. Nat Genet 2012;44:1137-41.
    • (2012) Nat Genet , vol.44 , pp. 1137-1141
    • Liu, J.Z.1    Almarri, M.A.2    Gaffney, D.J.3
  • 23
    • 34548738566 scopus 로고    scopus 로고
    • Population genomics of human gene expression
    • Stranger BE, Nica AC, Forrest MS, et al. Population genomics of human gene expression. Nat Genet 2007;39:1217-24.
    • (2007) Nat Genet , vol.39 , pp. 1217-1224
    • Stranger, B.E.1    Nica, A.C.2    Forrest, M.S.3
  • 24
    • 77950458649 scopus 로고    scopus 로고
    • Transcriptome genetics using second generation sequencing in a Caucasian population
    • Montgomery SB, Sammeth M, Gutierrez-Arcelus M, et al. Transcriptome genetics using second generation sequencing in a Caucasian population. Nature 2010;464:773-7.
    • (2010) Nature , vol.464 , pp. 773-777
    • Montgomery, S.B.1    Sammeth, M.2    Gutierrez-Arcelus, M.3
  • 25
    • 84862790007 scopus 로고    scopus 로고
    • Use of a multiethnic approach to identify rheumatoid- arthritis-susceptibility loci, 1p36 and 17q12
    • Kurreeman FA, Stahl EA, Okada Y, et al. Use of a multiethnic approach to identify rheumatoid- arthritis-susceptibility loci, 1p36 and 17q12. Am J Hum Genet 2012;90:524-32.
    • (2012) Am J Hum Genet , vol.90 , pp. 524-532
    • Kurreeman, F.A.1    Stahl, E.A.2    Okada, Y.3
  • 26
    • 84855172814 scopus 로고    scopus 로고
    • The pathogenesis of rheumatoid arthritis
    • McInnes IB, Schett G. The pathogenesis of rheumatoid arthritis. N Engl J Med 2011;365:2205-19.
    • (2011) N Engl J Med , vol.365 , pp. 2205-2219
    • McInnes, I.B.1    Schett, G.2
  • 27
    • 77955965216 scopus 로고    scopus 로고
    • OX40-OX40 ligand interaction in T-cell-mediated immunity and immunopathology
    • Ishii N, Takahashi T, Soroosh P, et al. OX40-OX40 ligand interaction in T-cell-mediated immunity and immunopathology. Adv Immunol 2010;105:63-98.
    • (2010) Adv Immunol , vol.105 , pp. 63-98
    • Ishii, N.1    Takahashi, T.2    Soroosh, P.3
  • 28
    • 43449134355 scopus 로고    scopus 로고
    • Distinct regulation of effector and memory T-cell differentiation
    • Kallies A. Distinct regulation of effector and memory T-cell differentiation. Immunol Cell Biol 2008;86:325-32.
    • (2008) Immunol Cell Biol , vol.86 , pp. 325-332
    • Kallies, A.1
  • 29
    • 79957654061 scopus 로고    scopus 로고
    • The dual nature of Ets-1: Focus to the pathogenesis of systemic lupus erythematosus
    • Leng RX, Pan HF, Chen GM, et al. The dual nature of Ets-1: focus to the pathogenesis of systemic lupus erythematosus. Autoimmun Rev 2011;10:439-43.
    • (2011) Autoimmun Rev , vol.10 , pp. 439-443
    • Leng, R.X.1    Pan, H.F.2    Chen, G.M.3
  • 30
    • 84867179842 scopus 로고    scopus 로고
    • TULA-family proteins: A new class of cellular regulators
    • Tsygankov AY. TULA-family proteins: a new class of cellular regulators. J Cell Physiol 2013;228:43-9.
    • (2013) J Cell Physiol , vol.228 , pp. 43-49
    • Tsygankov, A.Y.1
  • 31
    • 84872328824 scopus 로고    scopus 로고
    • Meta-analysis followed by replication identifies loci in or near CDKN1B, TET3, CD80, DRAM1, and ARID5B as associated with systemic lupus erythematosus in Asians
    • Yang W, Tang H, Zhang Y, et al. Meta-analysis followed by replication identifies loci in or near CDKN1B, TET3, CD80, DRAM1, and ARID5B as associated with systemic lupus erythematosus in Asians. Am J Hum Genet 2013;92:41-51.
    • (2013) Am J Hum Genet , vol.92 , pp. 41-51
    • Yang, W.1    Tang, H.2    Zhang, Y.3
  • 32
    • 70350629871 scopus 로고    scopus 로고
    • Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus
    • Han JW, Zheng HF, Cui Y, et al. Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus. Nat Genet 2009;41:1234-7.
    • (2009) Nat Genet , vol.41 , pp. 1234-1237
    • Han, J.W.1    Zheng, H.F.2    Cui, Y.3
  • 33
    • 78649489009 scopus 로고    scopus 로고
    • Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci
    • Franke A, McGovern DP, Barrett JC, et al. Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci. Nat Genet 2010;42:1118-25.
    • (2010) Nat Genet , vol.42 , pp. 1118-1125
    • Franke, A.1    McGovern, D.P.2    Barrett, J.C.3
  • 34
    • 80051684615 scopus 로고    scopus 로고
    • Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis
    • International Multiple Sclerosis Genetics C, Wellcome Trust Case Control C
    • International Multiple Sclerosis Genetics C, Wellcome Trust Case Control C, Sawcer S, et al. Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. Nature 2011;476:214-19.
    • (2011) Nature , vol.476 , pp. 214-219
    • Sawcer, S.1
  • 35
    • 77649206245 scopus 로고    scopus 로고
    • Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus
    • Yang W, Shen N, Ye DQ, et al. Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus. PLoS Genet 2010;6:e1000841.
    • (2010) PLoS Genet , vol.6 , pp. e1000841
    • Yang, W.1    Shen, N.2    Ye, D.Q.3
  • 36
    • 77950243833 scopus 로고    scopus 로고
    • Multiple common variants for celiac disease influencing immune gene expression
    • Dubois PC, Trynka G, Franke L, et al. Multiple common variants for celiac disease influencing immune gene expression. Nat Genet 2010;42:295-302.
    • (2010) Nat Genet , vol.42 , pp. 295-302
    • Dubois, P.C.1    Trynka, G.2    Franke, L.3
  • 37
    • 79953208931 scopus 로고    scopus 로고
    • Genome-wide association study identifies 12 new susceptibility loci for primary biliary cirrhosis
    • Mells GF, Floyd JA, Morley KI, et al. Genome-wide association study identifies 12 new susceptibility loci for primary biliary cirrhosis. Nat Genet 2011;43:329-32.
    • (2011) Nat Genet , vol.43 , pp. 329-332
    • Mells, G.F.1    Floyd, J.A.2    Morley, K.I.3
  • 38
    • 84868207237 scopus 로고    scopus 로고
    • Genome-wide association study identifies a common variant in RAD51B associated with male breast cancer risk
    • Orr N, Lemnrau A, Cooke R, et al. Genome-wide association study identifies a common variant in RAD51B associated with male breast cancer risk. Nat Genet 2012;44:1182-4.
    • (2012) Nat Genet , vol.44 , pp. 1182-1184
    • Orr, N.1    Lemnrau, A.2    Cooke, R.3
  • 39
    • 67349199566 scopus 로고    scopus 로고
    • Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes
    • Barrett JC, Clayton DG, Concannon P, et al. Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. Nat Genet 2009;41:703-7.
    • (2009) Nat Genet , vol.41 , pp. 703-707
    • Barrett, J.C.1    Clayton, D.G.2    Concannon, P.3
  • 40
    • 63249115398 scopus 로고    scopus 로고
    • Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes
    • Grant SF, Qu HQ, Bradfield JP, et al. Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes. Diabetes 2009;58:290-5.
    • (2009) Diabetes , vol.58 , pp. 290-295
    • Grant, S.F.1    Qu, H.Q.2    Bradfield, J.P.3
  • 41
    • 77951780943 scopus 로고    scopus 로고
    • Variant of TYR and autoimmunity susceptibility loci in generalized vitiligo
    • Jin Y, Birlea SA, Fain PR, et al. Variant of TYR and autoimmunity susceptibility loci in generalized vitiligo. N Engl J Med 2010;362:1686-97.
    • (2010) N Engl J Med , vol.362 , pp. 1686-1697
    • Jin, Y.1    Birlea, S.A.2    Fain, P.R.3
  • 42
    • 79952262073 scopus 로고    scopus 로고
    • Meta-analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci
    • Zhernakova A, Stahl EA, Trynka G, et al. Meta-analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci. PLoS Genet 2011;7:e1002004.
    • (2011) PLoS Genet , vol.7 , pp. e1002004
    • Zhernakova, A.1    Stahl, E.A.2    Trynka, G.3
  • 43
    • 84882449068 scopus 로고    scopus 로고
    • Genetic insights into common pathways and complex relationships among immune-mediated diseases
    • Parkes M, Cortes A, van Heel DA, et al. Genetic insights into common pathways and complex relationships among immune-mediated diseases. Nat Rev Genet 2013;14:661-73.
    • (2013) Nat Rev Genet , vol.14 , pp. 661-673
    • Parkes, M.1    Cortes, A.2    Van Heel, D.A.3
  • 44
    • 82255192188 scopus 로고    scopus 로고
    • Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease
    • Trynka G, Hunt KA, Bockett NA, et al. Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease. Nat Genet 2011;43:1193-201.
    • (2011) Nat Genet , vol.43 , pp. 1193-1201
    • Trynka, G.1    Hunt, K.A.2    Bockett, N.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.