-
1
-
-
1542614989
-
Dynamics of bacterial hand contamination during routine neonatal care
-
15061408
-
Pessoa-Silva CL, Dharan S, Hugonnet S, Touveneau S, Posfay-Barbe K, Pfister R, Pittet D. Dynamics of bacterial hand contamination during routine neonatal care. Infect Control Hosp Epidemiol 2004, 25:192-197. 10.1086/502376, 15061408.
-
(2004)
Infect Control Hosp Epidemiol
, vol.25
, pp. 192-197
-
-
Pessoa-Silva, C.L.1
Dharan, S.2
Hugonnet, S.3
Touveneau, S.4
Posfay-Barbe, K.5
Pfister, R.6
Pittet, D.7
-
2
-
-
84892562813
-
House dust exposure mediates gut microbiome Lactobacillus enrichment and airway immune defense against allergens and virus infection.
-
Lynch SV
-
Fujimura KE, Demoor T, Rauch M, Faruqi AA, Jang S, Johnson CC, Boushey HA, Zoratti E, Ownby D. Lukacs NW 2013, House dust exposure mediates gut microbiome Lactobacillus enrichment and airway immune defense against allergens and virus infection. Proc Natl Acad Sci: Lynch SV, doi:10.1073/pnas.1310750111.
-
(2013)
Proc Natl Acad Sci
-
-
Fujimura, K.E.1
Demoor, T.2
Rauch, M.3
Faruqi, A.A.4
Jang, S.5
Johnson, C.C.6
Boushey, H.A.7
Zoratti, E.8
Ownby, D.9
Lukacs, N.W.10
-
3
-
-
84865304652
-
Household transmission of meticillin-resistant Staphylococcus aureus and other staphylococci
-
22917102
-
Davis MF, Iverson SA, Baron P, Vasse A, Silbergeld EK, Lautenbach E, Morris DO. Household transmission of meticillin-resistant Staphylococcus aureus and other staphylococci. Lancet Infect Dis 2012, 12:703-716. 10.1016/S1473-3099(12)70156-1, 22917102.
-
(2012)
Lancet Infect Dis
, vol.12
, pp. 703-716
-
-
Davis, M.F.1
Iverson, S.A.2
Baron, P.3
Vasse, A.4
Silbergeld, E.K.5
Lautenbach, E.6
Morris, D.O.7
-
4
-
-
72949091232
-
Bacterial community variation in human body habitats across space and time
-
3602444, 19892944
-
Costello EK, Lauber CL, Hamady M, Fierer N, Gordon JI, Knight R. Bacterial community variation in human body habitats across space and time. Science 2009, 326:1694-1697. 10.1126/science.1177486, 3602444, 19892944.
-
(2009)
Science
, vol.326
, pp. 1694-1697
-
-
Costello, E.K.1
Lauber, C.L.2
Hamady, M.3
Fierer, N.4
Gordon, J.I.5
Knight, R.6
-
5
-
-
56649124715
-
The influence of sex, handedness, and washing on the diversity of hand surface bacteria
-
2584711, 19004758
-
Fierer N, Hamady M, Lauber CL, Knight R. The influence of sex, handedness, and washing on the diversity of hand surface bacteria. Proc Natl Acad Sci USA 2008, 105:17994-17999. 10.1073/pnas.0807920105, 2584711, 19004758.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 17994-17999
-
-
Fierer, N.1
Hamady, M.2
Lauber, C.L.3
Knight, R.4
-
6
-
-
66349083859
-
Topographical and temporal diversity of the human skin microbiome
-
2805064, 19478181
-
Grice EA, Kong HH, Conlan S, Deming CB, Davis J, Young AC, Bouffard GG, Blakesley RW, Murray PR, Green ED, Turner ML, Segre JA. Topographical and temporal diversity of the human skin microbiome. Science 2009, 324:1190-1192. 10.1126/science.1171700, 2805064, 19478181.
-
(2009)
Science
, vol.324
, pp. 1190-1192
-
-
Grice, E.A.1
Kong, H.H.2
Conlan, S.3
Deming, C.B.4
Davis, J.5
Young, A.C.6
Bouffard, G.G.7
Blakesley, R.W.8
Murray, P.R.9
Green, E.D.10
Turner, M.L.11
Segre, J.A.12
-
7
-
-
81755184089
-
Microbial biogeography of public restroom surfaces
-
3223236, 22132229
-
Flores GE, Bates ST, Knights D, Lauber CL, Stombaugh J, Knight R, Fierer N. Microbial biogeography of public restroom surfaces. PLoS One 2011, 6:e28132. 10.1371/journal.pone.0028132, 3223236, 22132229.
-
(2011)
PLoS One
, vol.6
-
-
Flores, G.E.1
Bates, S.T.2
Knights, D.3
Lauber, C.L.4
Stombaugh, J.5
Knight, R.6
Fierer, N.7
-
8
-
-
84873102288
-
Diversity, distribution and sources of bacteria in residential kitchens
-
23171378
-
Flores GE, Bates ST, Caporaso JG, Lauber CL, Leff JW, Knight R, Fierer N. Diversity, distribution and sources of bacteria in residential kitchens. Environ Microbiol 2013, 15:588-596. 10.1111/1462-2920.12036, 23171378.
-
(2013)
Environ Microbiol
, vol.15
, pp. 588-596
-
-
Flores, G.E.1
Bates, S.T.2
Caporaso, J.G.3
Lauber, C.L.4
Leff, J.W.5
Knight, R.6
Fierer, N.7
-
9
-
-
84877119573
-
Significant changes in the skin microbiome mediated by the sport of roller derby
-
3628844, 23638391
-
Meadow JF, Bateman AC, Herkert KM, O'Connor TK, Green JL. Significant changes in the skin microbiome mediated by the sport of roller derby. PeerJ 2013, 1:e53. 3628844, 23638391.
-
(2013)
PeerJ
, vol.1
-
-
Meadow, J.F.1
Bateman, A.C.2
Herkert, K.M.3
O'Connor, T.K.4
Green, J.L.5
-
10
-
-
84892373483
-
Indoor airborne bacterial communities are influenced by ventilation, occupancy, and outdoor air source
-
Meadow JF, Altrichter AE, Kembel SW, Kline J, Mhuireach G, Moriyama M, Northcutt D, O'Connor TK, Womack AM, Brown GZ, Green JL, Bohannan BJM. Indoor airborne bacterial communities are influenced by ventilation, occupancy, and outdoor air source. Indoor Air 2013, 24:41-48.
-
(2013)
Indoor Air
, vol.24
, pp. 41-48
-
-
Meadow, J.F.1
Altrichter, A.E.2
Kembel, S.W.3
Kline, J.4
Mhuireach, G.5
Moriyama, M.6
Northcutt, D.7
O'Connor, T.K.8
Womack, A.M.9
Brown, G.Z.10
Green, J.L.11
Bohannan, B.J.M.12
-
11
-
-
35549007148
-
Short pyrosequencing reads suffice for accurate microbial community analysis
-
2094085, 17881377
-
Liu Z, Lozupone CA, Hamady M, Bushman FD, Knight R. Short pyrosequencing reads suffice for accurate microbial community analysis. Nucleic Acids Res 2007, 35:e120. 10.1093/nar/gkm541, 2094085, 17881377.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Liu, Z.1
Lozupone, C.A.2
Hamady, M.3
Bushman, F.D.4
Knight, R.5
-
12
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
3156573, 20383131
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Tumbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R. QIIME allows analysis of high-throughput community sequencing data. Nat Methods 2010, 7:335-336. 10.1038/nmeth.f.303, 3156573, 20383131.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Tumbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
13
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
20709691
-
Edgar RC. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 2010, 26:2460-2461. 10.1093/bioinformatics/btq461, 20709691.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
14
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
1489311, 16820507
-
DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, Keller K, Huber T, Dalevi D, Hu P, Andersen GL. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 2006, 72:5069-5072. 10.1128/AEM.03006-05, 1489311, 16820507.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
15
-
-
58149200948
-
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
-
Cole JR, Wang Q, Cardenas E, Fish J, Chai B, Farris RJ, Kulam-Syed-Mohideen AS, McGarrell DM, Marsh T, Garrity GM, Tiedje JM. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 2009, 37:141-145.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 141-145
-
-
Cole, J.R.1
Wang, Q.2
Cardenas, E.3
Fish, J.4
Chai, B.5
Farris, R.J.6
Kulam-Syed-Mohideen, A.S.7
McGarrell, D.M.8
Marsh, T.9
Garrity, G.M.10
Tiedje, J.M.11
-
17
-
-
84956935512
-
-
Ordination and Multivariate Analysis for Ecology
-
Roberts DW. labdsv 2010, Ordination and Multivariate Analysis for Ecology, [http://cran.r-project.org/web/packages/labdsv/index.html].
-
(2010)
labdsv
-
-
Roberts, D.W.1
-
18
-
-
84963842024
-
-
Community Ecology Package
-
Oksanen J, Blanchet FG, Kindt R, Legendre P, O'Hara RB, Simpson GL, Solymos P, Stevens MHH, Wagner H. vegan 2011, Community Ecology Package, [http://cran.r-project.org/web/packages/vegan/index.html].
-
(2011)
vegan
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
O'Hara, R.B.5
Simpson, G.L.6
Solymos, P.7
Stevens, M.H.H.8
Wagner, H.9
-
19
-
-
84887638837
-
Knitr: a comprehensive tool for reproducible research in R
-
Chapman and Hall/CRC: Stodden V, Leisch F, Peng RD
-
Xie Y. knitr: a comprehensive tool for reproducible research in R. In Implementing Reprodcible Compututational Research 2013, Chapman and Hall/CRC: Stodden V, Leisch F, Peng RD.
-
(2013)
In Implementing Reprodcible Compututational Research
-
-
Xie, Y.1
-
20
-
-
0031284508
-
Species assemblages and indicator species: the need for a flexible asymmetrical approach
-
Dufrene M, Legendre P. Species assemblages and indicator species: the need for a flexible asymmetrical approach. Ecol Monogr 1997, 67:345-366.
-
(1997)
Ecol Monogr
, vol.67
, pp. 345-366
-
-
Dufrene, M.1
Legendre, P.2
-
21
-
-
67649223259
-
Bacterial succession on the leaf surface: a novel system for studying successional dynamics
-
19221834
-
Redford AJ, Fierer N. Bacterial succession on the leaf surface: a novel system for studying successional dynamics. Microb Ecol 2009, 58:189-198. 10.1007/s00248-009-9495-y, 19221834.
-
(2009)
Microb Ecol
, vol.58
, pp. 189-198
-
-
Redford, A.J.1
Fierer, N.2
-
22
-
-
52949144888
-
The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling
-
18764871
-
Nemergut DR, Townsend AR, Sattin SR, Freeman KR, Fierer N, Neff JC, Bowman WD, Schadt CW, Weintraub MN, Schmidt SK. The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling. Environ Microbiol 2008, 10:3093-3105. 10.1111/j.1462-2920.2008.01735.x, 18764871.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3093-3105
-
-
Nemergut, D.R.1
Townsend, A.R.2
Sattin, S.R.3
Freeman, K.R.4
Fierer, N.5
Neff, J.C.6
Bowman, W.D.7
Schadt, C.W.8
Weintraub, M.N.9
Schmidt, S.K.10
-
23
-
-
40549127742
-
Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile
-
2258623, 18192411
-
Hansel CM, Fendorf S, Jardine PM, Francis CA. Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile. Appl Environ Microbiol 2008, 74:1620-1633. 10.1128/AEM.01787-07, 2258623, 18192411.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 1620-1633
-
-
Hansel, C.M.1
Fendorf, S.2
Jardine, P.M.3
Francis, C.A.4
-
24
-
-
75849154707
-
Circumpolar synchrony in big river bacterioplankton
-
2783008, 19940248
-
Crump BC, Peterson BJ, Raymond PA, Amon RMW, Rinehart A, McClelland JW, Holmes RM. Circumpolar synchrony in big river bacterioplankton. Proc Natl Acad Sci USA 2009, 106:21208-21212. 10.1073/pnas.0906149106, 2783008, 19940248.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 21208-21212
-
-
Crump, B.C.1
Peterson, B.J.2
Raymond, P.A.3
Amon, R.M.W.4
Rinehart, A.5
McClelland, J.W.6
Holmes, R.M.7
-
25
-
-
84863801576
-
Size-resolved emission rates of airborne bacteria and fungi in an occupied classroom
-
3437488, 22257156
-
Qian J, Hospodsky D, Yamamoto N, Nazaroff WW, Peccia J. Size-resolved emission rates of airborne bacteria and fungi in an occupied classroom. Indoor Air 2012, 22:339-351. 10.1111/j.1600-0668.2012.00769.x, 3437488, 22257156.
-
(2012)
Indoor Air
, vol.22
, pp. 339-351
-
-
Qian, J.1
Hospodsky, D.2
Yamamoto, N.3
Nazaroff, W.W.4
Peccia, J.5
-
26
-
-
77950904616
-
Forensic identification using skin bacterial communities
-
2852011, 20231444
-
Fierer N, Lauber CL, Zhou N, McDonald D, Costello EK, Knight R. Forensic identification using skin bacterial communities. Proc Natl Acad Sci USA 2010, 107:6477-6481. 10.1073/pnas.1000162107, 2852011, 20231444.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 6477-6481
-
-
Fierer, N.1
Lauber, C.L.2
Zhou, N.3
McDonald, D.4
Costello, E.K.5
Knight, R.6
-
27
-
-
84897846339
-
Architectural design drives the biogeography of indoor bacterial communities
-
3906134, 24489843
-
Kembel SW, Meadow JF, O'Connor TK, Mhuireach G, Northcutt D, Kline J, Moriyama M, Brown GZ, Bohannan BJM, Green JL. Architectural design drives the biogeography of indoor bacterial communities. PLoS One 2014, 9:e87093. 10.1371/journal.pone.0087093, 3906134, 24489843.
-
(2014)
PLoS One
, vol.9
-
-
Kembel, S.W.1
Meadow, J.F.2
O'Connor, T.K.3
Mhuireach, G.4
Northcutt, D.5
Kline, J.6
Moriyama, M.7
Brown, G.Z.8
Bohannan, B.J.M.9
Green, J.L.10
-
28
-
-
0017237561
-
Quantitative studies on the dispersal of skin bacteria into the air
-
1263248
-
Noble WC, Habbema JDF, van Furth R, Smith I, de Raay C. Quantitative studies on the dispersal of skin bacteria into the air. J Med Microbiol 1976, 9:53-61. 10.1099/00222615-9-1-53, 1263248.
-
(1976)
J Med Microbiol
, vol.9
, pp. 53-61
-
-
Noble, W.C.1
Habbema, J.D.F.2
van Furth, R.3
Smith, I.4
de Raay, C.5
-
29
-
-
0033606097
-
Bacterial contamination of the hands of hospital staff during routine patient care
-
10219927
-
Pittet D, Dharan S, Touveneau S, Sauvan V, Perneger TV. Bacterial contamination of the hands of hospital staff during routine patient care. Arch Intern Med 1999, 159:821-826. 10.1001/archinte.159.8.821, 10219927.
-
(1999)
Arch Intern Med
, vol.159
, pp. 821-826
-
-
Pittet, D.1
Dharan, S.2
Touveneau, S.3
Sauvan, V.4
Perneger, T.V.5
-
30
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
3564958, 22699609
-
The Human Microbiome Project Consortium Structure, function and diversity of the healthy human microbiome. Nature 2012, 486:207-214. 10.1038/nature11234, 3564958, 22699609
-
(2012)
Nature
, vol.486
, pp. 207-214
-
-
-
31
-
-
82455212860
-
Survival of bacterial pathogens on paper and bacterial retrieval from paper to hands: preliminary results
-
Hübner N-O, Hübner C, Kramer A, Assadian O. Survival of bacterial pathogens on paper and bacterial retrieval from paper to hands: preliminary results. Am J Nurs 2011, 111:30-34.
-
(2011)
Am J Nurs
, vol.111
, pp. 30-34
-
-
Hübner, N.-O.1
Hübner, C.2
Kramer, A.3
Assadian, O.4
|