Natribaculum breve gen. Nov., sp. nov. and natribaculum longum sp. nov., Halophilic archaea isolated from saline soil

International Journal of Systematic and Evolutionary Microbiology

Volumn 65, Issue 2, 2015, Pages 604-608

  Liu, Qin ^a,b   Ren, Min ^a,b   Zhang, Li Li ^a,b  

^a the Production Engineering Laboratory of Characteristic Fruit Trees in Southern Xinjiang of Xinjiang Production and Construction Corps   (China)

^b Key Laboratory of Protection and Utilization of Biological Resources in Tarim Basin of Xinjiang Production and Construction Corps   (China)

Author keywords

[No Author keywords available]

Indexed keywords

AMPICILLIN; BACITRACIN; CHLORAMPHENICOL; CIPROFLOXACIN; DISULFATED MANNOSYL GLUCOSYL DIETHER; ERYTHROMYCIN; ESTER; GALACTOSYL MANNOSYL GLUCOSYL DIETHER; GENOMIC DNA; GLUCOSE; GLYCOLIPID; KANAMYCIN; MANNOSE; NALIDIXIC ACID; NEOMYCIN; NITROFURANTOIN; NORFLOXACIN; NOVOBIOCIN; NYSTATIN; PHOSPHATIDYLGLYCEROL; PHOSPHATIDYLGLYCEROL PHOSPHATE METHYL ESTER; PYRUVIC ACID; RIBOSE; RIFAMPICIN; RIFAMPICIN PLUS TRIMETHOPRIM; RNA 16S; SODIUM CHLORIDE; TETRACYCLINE; UNCLASSIFIED DRUG; VANCOMYCIN; ARCHAEAL DNA; LIPID;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL GROWTH; CELL STRUCTURE; CHINA; CHROMATOGRAPHY; DNA DNA HYBRIDIZATION; ENERGY RESOURCE; GRAM NEGATIVE BACTERIUM; HALOBACTERIALES; HALOPHILIC ARCHAEON; HALOSTAGNICOLA LARSENII; HALOTERRIGENA; HALOTERRIGENA LONGA; HALOVIVAX ASIATICUS; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; NATRIALBA MAGADII; NATRIBACULUM BREVE; NATRIBACULUM LONGUM; NATRINEMA; NATRINEMA PELLIRUBRUM; NATRONOLIMNOBIUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PHYLOGENY; PRIORITY JOURNAL; SOIL; ARCHAEAL GENE; CHEMISTRY; CLASSIFICATION; DNA BASE COMPOSITION; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEIC ACID HYBRIDIZATION; SALINITY;

ARCHAEA; HALOBACTERIACEAE; HALOTERRIGENA; NATRINEMA; NATRONOLIMNOBIUS; NEGIBACTERIA;

BASE COMPOSITION; CHINA; DNA, ARCHAEAL; GENES, ARCHAEAL; GLYCOLIPIDS; HALOBACTERIACEAE; LIPIDS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; RNA, RIBOSOMAL, 16S; SALINITY; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY;

EID: 84927171635     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.060541-0     Document Type: Article

References (20)

1. Amoozegar, M. A., MakhdoumiKakhki, A., Mehrshad, M., Fazeli, S. A. S., Sproer, C. and Ventosa, A. (2014). Halorientalis persicus sp. nov., an extremely halophilic archaeon isolated from a salt lake and emended description of the genus Halorientalis. Int J Syst Evol Microbiol 64, 940–944.
2. Cui, H.L. and Qiu, X.X. (2014). Salinarubrum litoreum gen. nov., sp. nov.: a new member of the family Halobacteriaceae isolated from Chinese marine solar salterns. Antonie van Leeuwenhoek 105, 135–141.
3. Cui, H.L. and Zhang, W.J. (2014). Salinigranum rubrum gen. nov., sp. nov., a new member of the family Halobacteriaceae isolated from a marine solar saltern. Int J Syst Evol Microbiol 64, 1978–1983.
4. Cui, H.L., Gao, X., Yang, X. and Xu, X.W. (2010). Halorussus rarus gen. nov., sp. nov., a new member of the family Halobacteriaceae isolated from a marine solar saltern. Extremophiles 14, 493–499.
5. Cui, H.L., Yang, X. and Mou, Y. Z. (2011). Salinarchaeum laminariae gen. nov., sp. nov.: a new member of the family Halobacteriaceae isolated from salted brown alga Laminaria. Extremophiles 15, 625–631.
6. De Ley, J., Cattoir, H. andReynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133–142.
7. Dussault, H. P. (1955). An improved technique for staining red halophilic bacteria. J Bacteriol 70, 484–485.
8. Gibbons, N. E. (1974). Family V. Halobacteriaceae fam. nov. In Bergey’s Manual of Determinative Bacteriology, 8th edn, pp. 269–273. Edited by R. E. Buchanan & N. E. Gibbons. Baltimore: Williams & Wilkins.
9. Huss, V. A., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184–192.
10. Liu, B.B., Tang, S.K., Zhang, Y.G., Lu, X.H., Li, L., Cheng, J., Zhang, Y.M., Zhang, L.L. and Li, W.J. (2013). Halalkalicoccus paucihalophilus sp. nov., a halophilic archaeon from Lop Nur region in Xinjiang, northwest of China. Antonie van Leeuwenhoek 103, 1007–1014.
11. Mesbah, M., Premachandran, U. and Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Evol Bacteriol 39, 159– 167.
12. Minegishi, H., Kamekura, M., Itoh, T., Echigo, A., Usami, R. and Hashimoto, T. (2010). Further refinement of the phylogeny of the Halobacteriaceae based on the full-length RNA polymerase subunit B9 (rpoB9) gene. Int J Syst Evol Microbiol 60, 2398–2408.
13. Oren, A. (2012). Taxonomy of the family Halobacteriaceae: a paradigm for changing concepts in prokaryote systematics. Int J Syst Evol Microbiol 62, 263–271.
14. Oren, A. (2014). Taxonomy of halophilic Archaea: current status and future challenges. Extremophiles 18, 825–834.
15. Oren, A., Ventosa, A. & Grant, W. D. (1997). Proposed minimal standards for description of new taxa in the order Halobacteriales. Int J Syst Bacteriol 47, 233–238.
16. Shimane, Y., Hatada, Y., Minegishi, H., Echigo, A., Nagaoka, S., Miyazaki, M., Ohta, Y., Maruyama, T., Usami, R. and other authors (2011). Salarchaeum japonicum gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea isolated from commercial salt. Int J Syst Evol Microbiol 61, 2266–2270.
17. Song, H. S., Cha, I.T., Yim, K. J., Lee, H.W., Hyun, D.W., Lee, S.J., Rhee, S.K., Kim, K.N., Kim, D. & other authors (2014). Halapricum salinum gen. nov., sp. nov., an extremely halophilic archaeon isolated from non-purified solar salt. Antonie van Leeuwenhoek 105, 979– 986.
18. Stackebrandt, E. and Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846–849.
19. Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731–2739.
20. Zhang, W.Y., Huo, Y.Y., Zhang, X.Q., Zhu, X.F. & Wu, M. (2013). Halolamina salifodinae sp. nov. and Halolamina salina sp. nov., two extremely halophilic archaea isolated from a salt mine. Int J Syst Evol Microbiol 63, 4380–4385.