piggyBac transposon-derived targeting shRNA interference against the Bombyx mori nucleopolyhedrovirus (BmNPV)

Molecular Biology Reports

Volumn 41, Issue 12, 2014, Pages 8247-8254

  Zhou, Fang ^a   Chen, Rui ting ^a   Lu, Yan ^a   Liang, Shuang ^a   Wang, Mei xian ^a   Miao, Yun gen ^a  

^a ZHEJIANG UNIVERSITY   (China)

Author keywords

Bombyx mori nucleopolyhedrovirus (BmNPV); piggyBac transposon; Short hairpin RNA (shRNA) interference; Silkworm Bombyx mori L(Lepidoptera: Bombycidae)

Indexed keywords

SHORT HAIRPIN RNA; SMALL INTERFERING RNA; TRANSPOSON;

ANIMAL CELL; ARTICLE; BIOTECHNOLOGY; BOMBYX MORI NUCLEOPOLYHEDROVIRUS; CONTROLLED STUDY; DNA VIRUS INFECTION; GENE SILENCING; GENE TARGETING; IN VITRO STUDY; INFECTION CONTROL; LEF 1 GENE; LEF 2 GENE; LEF 3 GENE; NONHUMAN; PIGGYBAC TRANSPOSON; RNA INTERFERENCE; TRANSPOSON; VIRUS CELL INTERACTION; VIRUS GENE; VIRUS INHIBITION; VIRUS RESISTANCE; ANIMAL; BACULOVIRIDAE; BOMBYX; GENETICS; PHYSIOLOGY; PROCEDURES; VIROLOGY; VIRUS REPLICATION;

BOMBYCIDAE; BOMBYX MORI; BOMBYX MORI NPV; LEPIDOPTERA;

ANIMALS; BOMBYX; DNA TRANSPOSABLE ELEMENTS; GENE KNOCKDOWN TECHNIQUES; GENES, VIRAL; NUCLEOPOLYHEDROVIRUS; RNA, SMALL INTERFERING; VIRUS REPLICATION;

EID: 84926640273     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-014-3726-0     Document Type: Article

References (45)

1. Rohrmann GF (1994) Nuclear polyhedrosis viruses. In: Webster RG, Granoff A (eds) Encyclopedia of virology. Academic Press, London, pp 130–136
2. Crook NE (1994) Granulosis viruses. In: Webster RG, Granoff A (eds) Encyclopedia of virology. Academic Press, London, pp 127–130
3. Maeda S, Majima K (1990) Molecular cloning and physical mapping of the genome of Bombyx mori nuclear polyhedrosis virus. J Gen Virol 71:1851–1855
4. Majima K, Kobara R, Maeda S (1993) Divergence and evolution of homologous regions of Bombyx mori nuclear polyhedrosis virus. J Virol 67:7513–7521
5. Kondo A, Maeda S (1991) Host range expansion by recombination of the baculoviruses Bombyx mori nuclear polyhedrosis virus and Autographa californica nuclear polyhedrosis virus. J Virol 65:3625–3632
6. Kanginakudru S, Royer C, Edupalli SV, Jalabert A, Mauchamp B, Chandrashekaraiah PSV, Chavancy G, Couble P, Nagaraju J (2007) Targeting ie-1 gene by RNAi induces baculoviral resistance in lepidopteran cell lines and in transgenic silkworms. Insect Mol Biol 16(5):635–644
7. Isobe R, Kojima K, Matsuyama T, Quan GX, Kanda T, Tamura T, Sahara K, Asano SI, Bando H (2004) Use of RNAi technology to confer enhanced resistance to BmNPV on transgenic silkworms. Arch Virol 149:1931–1940
8. Kool M, Voeten JTM, Goldbach RW, Vlak JM (1994) Functional mapping of regions of the Autographa californica nuclear polyhedrosis viral genome required for DNA replication. Virology 198(2):680–689
9. Lu A, Miller L (1995) The roles of eighteen baculovirus late expression factor genes in transcription and DNA replication. J Virol 69:975–982
10. Pathakamuri JA, Theilmann DA (2002) The acidic activation domain of the baculovirus trans activator IE1 contains a virus-specific domain essential for DNA replication. J Virol 76:5598–5604
11. Mikhailov VS, Rohrmann GF (2002) Baculovirus replication factor LEF-1 is a DNA primase. J Virol 76:2287–2297
12. Evans JT, Leisy DJ, Rohrmann GF (1997) Characterization of the interaction between the baculovirus replication factors LEF-1 and LEF-2. J Virol 71:3114–3119
13. Evans JT, Rosenblatt GS, Leisy DJ, Rohrmann GF (1999) Characterization of the interaction between the baculovirus ssDNA-binding protein (LEF-3) and putative helicase (P143). J Gen Virol 80:493–500
14. McDougal VV, Guarino LA (2000) The Autographa californica nuclear polyhedrosis virus p143 gene encodes a DNA helicase. J Virol 74:5273–5279
15. McDougal VV, Guarino LA (1999) Autographa californica nuclear polyhedrosis virus DNA polymerase: measurements of processivity and strand displacement. J Virol 73:4908–4918
16. Huh NE, Weaver RF (1990) Categorizing some early and late transcripts directed by the Autographa californica nuclear polyhedrosis virus. J Gen Virol 71:2195–2200
17. Huh NE, Weaver RF (1990) Identifying the RNA polymerases that synthesize specific transcripts of the Autographa californica nuclear polyhedrosis virus. J Gen Virol 71:195–201
18. Hoopes RRJ, Rohrmann GF (1991) In vitro transcription of baculovirus immediate early genes: accurate mRNA initiation by nuclear extracts from both insect and human cells. Proc Natl Acad Sci USA 88:4513–4517
19. Glocker B, Hoopes RRJ, Hodges L, Rohrmann GF (1993) In vitro transcription from baculovirus late gene promoters: accurate mRNA initiation by nuclear extracts prepared from infected Spodoptera frugiperda cells. J Virol 67:3771–3776
20. Guarino LA, Summers MD (1987) Nucleotide sequence and temporal expression of a baculovirus regulatory gene. J Virol 61:2091–2099
21. Guarino LA, Summers MD (1986) Functional mapping of a trans-activating gene required for expression of a baculovirus delayed-early gene. J Virol 57:563–571
22. Guarino LA, Summers MD (1986) Interspersed homologous DNA of Autographacalifornica nuclear polyhedrosis virus enhances delayed-early gene expression. J Virol 60:215–223
23. Nissen MS, Friesen PD (1989) Molecular analysis of the transcriptional regulatory region of an early baculovirus gene. J Virol 63:493–503
24. Carson DD, Summers MD, Guarino LA (1991) Molecular analysis of a baculovirus regulatory gene. Virology 182:279–286
25. Passarelli AL, Miller LK (1993) Three baculovirus genes involved in late mid very late gene expression: ie-1, ie-n, and lef-2. J Virol 67:2149–2158
26. Kovacs GR, Choi J, Guarino LA, Summers MD (1992) Functional dissection of the Autographa californica nuclear polyhedrosis virus immediate-early 1 transcriptional regulatory protein. J Virol 66:7429–7437
27. Kool M, Ahrens CH, Vlak JM, Rohrmann GF (1995) Replication of baculovirus DNA. J Gen Virol 76(9):2103–2118
28. Passarelli AL, Miller LK (1993) Identification and characterization of lef-1, a baculovirus gene involved in late and very late gene expression. J Virol 67:3481–3488
29. Carson DD, Guarino LA, Stjmmers MD (1988) Functional mapping of an AcNPV immediate early gene which augments expression of the IE-1 trans-activated 39 k gene. Virology 162:444–451
30. Dobos P, Cochran MA (1980) Protein synthesis in cells infected by Autographa californica nuclear polyhedrosis virus (AcNPV): the effect of cytosine arabinoside. Virology 103:446–464
31. Friesen PD, Miller LK (1986) The regulation of baculovirus gene expression. Curr Top Microbiol Immunol 131:31–49
32. Rice WC, Miller LK (1986) Baculovirus transcription in the presence of inhibitors and in nonpermissive Drosophila cells. Virus Res 6:155–172
33. Hang X, Dong W, Guarino LA (1995) The lef-3 gene of Autographa californica nuclear polyhedrosis virus encodes a single-stranded DNA-binding protein. J Virol 69:3924–3928
34. Riu L, Li H, Li WX, Ding SW (2004) RNA-based immunity in insects. In SGM Symposium 63: Microbe–vector Interactions in Vector-borne Diseases (Smith, G.L., Osbourn, A. And Gillespie, S.H., eds), pp. 63–74. Cambridge University Press
35. Subbaiah EV, Royer C, Kanginakudru S, Satyavathi VV, Babu AS, Sivaprasad V, Chavancy G, DaRocha M, Jalabert A, Mauchamp B, Basha I, Couble P, Nagaraju J (2013) Engineering silkworms for resistance to baculovirus through multigene RNA interference. Genetics 193:63–75
36. Jarvis DL, Weinkauf C, Guarino LA (1996) Immediate: early baculovirus vectors for foreign gene expression in transformed or infected insect cells. Protein Exp Purif 8:191–203
37. Jost S, Birgit KL, Heidrun K, Sandra S, Leona P, Jan M, Ralf K, Jens CB, Frieder S (2005) Single copy shRNA configuration for ubiquitous gene knockdown in mice. Nucl Acids Res 33(7):e67
38. Ohtsuka D, Nakatsukasa T, Fujita R, Asano SI, Sahara K, Bando H (2008) Use of Bombyx mori U6 promoter for inducing gene-silencing in silkworm Cells. J Insect Biotechnol Sericology 77:125–131
39. Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)). Methods 25:402–408
40. Fire A, Xu S, Montgomery MK, Kostas SA, Driver SE, Mello CC (1998) Montgomery M.K. potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391:806–811
41. Hammond SM, Caudy AA, Hannon GJ (2001) Post transcriptional gene silencing by double-stranded RNA. Nat Rev Genet 2:1110–1119
42. Brummelkamp TR, Bernards R, Agami R (2002) A system for stable expression of short interfering RNAs in mammalian cells. Science 296:550–553
43. Elbashir SM, Harborth J, Lendeckel W, Yalcin A, Weber K, Tuschl T (2001) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411:494–498
44. Liu Y, Alan H, Alexander R, Charles ES (1998) Double-strand RNA-specific adenosine deaminase: nucleic acid binding properties. Methods 15:199–205
45. Xu Y, Zhu CG, Jin YF, Zhang YZ (2004) Inhibition of BmNPV replication in Bombyx mori cell by dsRNA triggered RNA interference. Chin Sci Bull 49(12):1261–1266