Long term effect of gut microbiota transfer on diabetes development

Journal of Autoimmunity

Volumn 53, Issue C, 2014, Pages 85-94

  Peng, Jian ^a   Narasimhan, Sukanya ^a   Marchesi, Julian R ^b,c   Benson, Andrew ^d   Wong, F Susan ^e   Wen, Li ^a  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b CARDIFF UNIVERSITY   (United Kingdom)

^c IMPERIAL COLLEGE LONDON   (United Kingdom)

^d UNIVERSITY OF NEBRASKA LINCOLN   (United States)

^e CARDIFF UNIVERSITY   (United Kingdom)

Author keywords

Gut microbiota; Innate immunity; Mucosal immunology; Type 1 diabetes

Indexed keywords

BACTERIAL DNA; CD103 ANTIGEN; CD8 ANTIGEN; GAMMA INTERFERON; IMMUNOGLOBULIN A; INTEGRIN; INTERLEUKIN 17; RNA 16S; TRANSFORMING GROWTH FACTOR BETA; MYD88 PROTEIN, MOUSE; MYELOID DIFFERENTIATION FACTOR 88; PROBIOTIC AGENT;

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; BIOLOGICAL THERAPY; CD4+ T LYMPHOCYTE; CD8+ T LYMPHOCYTE; CLOSTRIDIACEAE; CONTROLLED STUDY; CYTOKINE PRODUCTION; FEMALE; FIRMICUTES; HISTOPATHOLOGY; IMMUNE RESPONSE; INNATE IMMUNITY; INSULIN DEPENDENT DIABETES MELLITUS; INSULITIS; INTESTINE FLORA; INTESTINE LYMPHATIC TISSUE; LACHNOSPIRACEAE; LACTOBACILLACEAE; LAMINA PROPRIA; MOUSE; NONHUMAN; PRIORITY JOURNAL; T LYMPHOCYTE; ANIMAL; BACTERIUM; DIABETES MELLITUS, EXPERIMENTAL; GENETICS; IMMUNOLOGY; INTESTINE; KNOCKOUT MOUSE; MICROBIOLOGY; MICROFLORA; NONOBESE DIABETIC MOUSE;

ANIMALS; BACTERIA; DIABETES MELLITUS, EXPERIMENTAL; INTESTINES; MICE; MICE, INBRED NOD; MICE, KNOCKOUT; MICROBIOTA; MYELOID DIFFERENTIATION FACTOR 88; PROBIOTICS;

EID: 84926417712     PISSN: 08968411     EISSN: 10959157     Source Type: Journal    
DOI: 10.1016/j.jaut.2014.03.005     Document Type: Article

References (44)

1. Atkinson M.A., Eisenbarth G.S., Michels A.W. Type 1 diabetes. Lancet 2014, 383:69-82.
2. Stene L.C., Rewers M. Immunology in the clinic review series; focus on type 1 diabetes and viruses: the enterovirus link to type 1 diabetes: critical review of human studies. Clin Exp Immunol 2012, 168:12-23.
3. Atkinson M.A., Chervonsky A. Does the gut microbiota have a role in type 1 diabetes? Early evidence from humans and animal models of the disease. Diabetologia 2012, 55:2868-2877.
4. Gale E.A. Amissing link in the hygiene hypothesis?. Diabetologia 2002, 45:588-594.
5. Bach J.F. The effect of infections on susceptibility to autoimmune and allergic diseases. NEngl J Med 2002, 347:911-920.
6. Gale E.A. The rise of childhood type 1 diabetes in the 20th century. Diabetes 2002, 51:3353-3361.
7. Rook G.A. The hygiene hypothesis and the increasing prevalence of chronic inflammatory disorders. Trans R Soc Trop Med Hyg 2007, 101:1072-1074.
8. Zuany-Amorim C., Sawicka E., Manlius C., Le Moine A., Brunet L.R., Kemeny D.M., et al. Suppression of airway eosinophilia by killed Mycobacterium vaccae-induced allergen-specific regulatory T-cells. Nat Med 2002, 8:625-629.
9. Rook G.A. Hygiene and other early childhood influences on the subsequent function of the immune system. Dig Dis 2011, 29:144-153.
10. Rook G.A. Hygiene hypothesis and autoimmune diseases. Clin Rev Allergy Immunol 2012, 42:5-15.
11. Barlan I.B., Bahceciler N., Akdis M., Akdis C.A. Role of bacillus Calmette-Guerin as an immunomodulator for the prevention and treatment of allergy and asthma. Curr Opin Allergy Clin Immunol 2005, 5:552-557.
12. Bjorksten B., Naaber P., Sepp E., Mikelsaar M. The intestinal microflora in allergic Estonian and Swedish 2-year-old children. Clin Exp Allergy 1999, 29:342-346.
13. Penders J., Thijs C., Mommers M., Stobberingh E.E., Dompeling E., Reijmerink N.E., et al. Intestinal lactobacilli and the DC-SIGN gene for their recognition by dendritic cells play a role in the aetiology of allergic manifestations. Microbiology 2010, 156:3298-3305.
14. Scrivener S., Yemaneberhan H., Zebenigus M., Tilahun D., Girma S., Ali S., et al. Independent effects of intestinal parasite infection and domestic allergen exposure on risk of wheeze in Ethiopia: a nested case-control study. Lancet 2001, 358:1493-1499.
15. Cooper P.J., Chico M.E., Rodrigues L.C., Ordonez M., Strachan D., Griffin G.E., et al. Reduced risk of atopy among school-age children infected with geohelminth parasites in a rural area of the tropics. JAllergy Clin Immunol 2003, 111:995-1000.
16. Rook G.A. Review series on helminths, immune modulation and the hygiene hypothesis: the broader implications of the hygiene hypothesis. Immunology 2009, 126:3-11.
17. Chappel C.I., Chappel W.R. The discovery and development of the BB rat colony: an animal model of spontaneous diabetes mellitus. Metabolism 1983, 32:8-10.
18. Meddings J.B., Jarand J., Urbanski S.J., Hardin J., Gall D.G. Increased gastrointestinal permeability is an early lesion in the spontaneously diabetic BB rat. Am J Physiol 1999, 276:G951-G957.
19. Calcinaro F., Dionisi S., Marinaro M., Candeloro P., Bonato V., Marzotti S., et al. Oral probiotic administration induces interleukin-10 production and prevents spontaneous autoimmune diabetes in the non-obese diabetic mouse. Diabetologia 2005, 48:1565-1575.
20. Wen L., Ley R.E., Volchkov P.Y., Stranges P.B., Avanesyan L., Stonebraker A.C., et al. Innate immunity and intestinal microbiota in the development of type 1 diabetes. Nature 2008, 455:1109-1113.
21. Adachi O., Kawai T., Takeda K., Matsumoto M., Tsutsui H., Sakagami M., et al. Targeted disruption of the MyD88 gene results in loss of IL-1- and IL-18-mediated function. Immunity 1998, 9:143-150.
22. Favier C.F., Vaughan E.E., De Vos W.M., Akkermans A.D. Molecular monitoring of succession of bacterial communities in human neonates. Appl Environ Microbiol 2002, 68:219-226.
23. Vaishnava S., Yamamoto M., Severson K.M., Ruhn K.A., Yu X., Koren O., et al. The antibacterial lectin RegIIIgamma promotes the spatial segregation of microbiota and host in the intestine. Science 2011, 334:255-258.
24. Caporaso J.G., Kuczynski J., Stombaugh J., Bittinger K., Bushman F.D., Costello E.K., et al. QIIME allows analysis of high-throughput community sequencing data. Nat Methods 2010, 7:335-336.
25. Annacker O., Coombes J.L., Malmstrom V., Uhlig H.H., Bourne T., Johansson-Lindbom B., et al. Essential role for CD103 in the T cell-mediated regulation of experimental colitis. JExp Med 2005, 202:1051-1061.
26. Das G., Gould D.S., Augustine M.M., Fragoso G., Sciutto E., Stroynowski I., et al. Qa-2-dependent selection of CD8alpha/alpha T cell receptor alpha/beta(+) cells in murine intestinal intraepithelial lymphocytes. JExp Med 2000, 192:1521-1528.
27. Konkel J.E., Maruyama T., Carpenter A.C., Xiong Y., Zamarron B.F., Hall B.E., et al. Control of the development of CD8alphaalpha+ intestinal intraepithelial lymphocytes by TGF-beta. Nat Immunol 2011, 12:312-319.
28. Giongo A., Gano K.A., Crabb D.B., Mukherjee N., Novelo L.L., Casella G., et al. Toward defining the autoimmune microbiome for type 1 diabetes. ISME J 2011, 5:82-91.
29. Ubeda C., Lipuma L., Gobourne A., Viale A., Leiner I., Equinda M., et al. Familial transmission rather than defective innate immunity shapes the distinct intestinal microbiota of TLR-deficient mice. JExp Med 2012, 209:1445-1456.
30. Niedringhaus T.P., Milanova D., Kerby M.B., Snyder M.P., Barron A.E. Landscape of next-generation sequencing technologies. Anal Chem 2011, 83:4327-4341.
31. Parkhill J., Wren B.W. Bacterial epidemiology and biology - lessons from genome sequencing. Genome Biol 2011, 12:230.
32. Koser C.U., Fraser L.J., Ioannou A., Becq J., Ellington M.J., Holden M.T., et al. Rapid single-colony whole-genome sequencing of bacterial pathogens. JAntimicrob Chemother 2014, 69:1275-1281.
33. Koser C.U., Bryant J.M., Becq J., Torok M.E., Ellington M.J., Marti-Renom M.A., et al. Whole-genome sequencing for rapid susceptibility testing of M.tuberculosis. NEngl J Med 2013, 369:290-292.
34. Reuter S., Ellington M.J., Cartwright E.J., Koser C.U., Torok M.E., Gouliouris T., et al. Rapid bacterial whole-genome sequencing to enhance diagnostic and public health microbiology. JAm Med Assoc 2013, 173:1397-1404.
35. Reuter S., Harrison T.G., Koser C.U., Ellington M.J., Smith G.P., Parkhill J., et al. Apilot study of rapid whole-genome sequencing for the investigation of a Legionella outbreak. BMJ Open 2013, 3.
36. Torok M.E., Reuter S., Bryant J., Koser C.U., Stinchcombe S.V., Nazareth B., et al. Rapid whole-genome sequencing for investigation of a suspected tuberculosis outbreak. JClin Microbiol 2013, 51:611-614.
37. Geuking M.B., Cahenzli J., Lawson M.A., Ng D.C., Slack E., Hapfelmeier S., et al. Intestinal bacterial colonization induces mutualistic regulatory T cell responses. Immunity 2011, 34:794-806.
38. Ng S.C., Kamm M.A., Stagg A.J., Knight S.C. Intestinal dendritic cells: their role in bacterial recognition, lymphocyte homing, and intestinal inflammation. Inflamm Bowel Dis 2010, 16:1787-1807.
39. Smith P.M., Howitt M.R., Panikov N., Michaud M., Gallini C.A., Bohlooly Y.M., et al. The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis. Science 2013, 341:569-573.
40. Arpaia N., Campbell C., Fan X., Dikiy S., van der Veeken J., deRoos P., et al. Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation. Nature 2013, 504:451-455.
41. Liu Y., Lan Q., Lu L., Chen M., Xia Z., Ma J., et al. Phenotypic and functional characteristic of a newly identified CD8+Foxp3-CD103+ regulatory T cells. JMol Cell Biol 2014, 6:81-92.
42. Zhang N., Bevan M.J. Transforming growth factor-beta signaling controls the formation and maintenance of gut-resident memory T cells by regulating migration and retention. Immunity 2013, 39:687-696.
43. Yurkovetskiy L., Burrows M., Khan A.A., Graham L., Volchkov P., Becker L., et al. Gender bias in autoimmunity is influenced by microbiota. Immunity 2013, 39:400-412.
44. Barin J.G., Afanasyeva M., Talor M.V., Rose N.R., Burek C.L., Caturegli P. Thyroid-specific expression of IFN-gamma limits experimental autoimmune thyroiditis by suppressing lymphocyte activation in cervical lymph nodes. JImmunol 2003, 170:5523-5529.