Multiplex peptide-based B cell epitope mapping

Methods in Molecular Biology

Volumn 1184, Issue , 2014, Pages 295-308

  Hensen, Sanne M M ^a   Derksen, Merel ^a   Pruijn, Ger J M ^b  

^a RADBOUD UNIVERSITY MEDICAL CENTER   (Netherlands)

^b RADBOUD UNIVERSITY NIJMEGEN   (Netherlands)

Author keywords

Antibody; Antigen; Antigen fragment library; iSPR; Microbeads; Peptide microarray

Indexed keywords

B LYMPHOCYTE ANTIGEN; IMMUNOGLOBULIN G; PEPTIDE FRAGMENT; SYNTHETIC PEPTIDE; EPITOPE; IMMUNOGLOBULIN F(AB) FRAGMENT; PEPTIDE LIBRARY;

ANTIGEN BINDING; ARTICLE; CONJUGATION; EPITOPE MAPPING; GENOMIC FRAGMENT; PEPTIDE LIBRARY; PRIORITY JOURNAL; PROTEIN MICROARRAY; SCREENING; SURFACE PLASMON RESONANCE; HUMAN; IMMUNOLOGY; ISOLATION AND PURIFICATION; PEPTIDE MAPPING; PROCEDURES;

EPITOPE MAPPING; EPITOPES, B-LYMPHOCYTE; HUMANS; IMMUNOGLOBULIN FAB FRAGMENTS; IMMUNOGLOBULIN G; PEPTIDE LIBRARY; PEPTIDE MAPPING; PROTEIN ARRAY ANALYSIS;

EID: 84925884095     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-1115-8_16     Document Type: Article

References (15)

1. Chayen NE, Saridakis E (2008) Protein crystallization: from purifi ed protein to diffractionquality crystal. Nat Methods 5(2):147-153
2. Mandell JG, Falick AM, Komives EA (1998) Identification of protein-protein interfaces by decreased amide proton solvent accessibility. Proc Natl Acad Sci USA 95(25):14705-14710
3. Geysen HM, Meloen RH, Barteling SJ (1984) Use of peptide synthesis to probe viral antigens for epitopes to a resolution of a single amino acid. Proc Natl Acad Sci USA 81(13):3998-4002
4. Rodda SJ (2001) Synthesis of multiple peptides on plastic pins. Curr Protoc Immunol Chapter 9:Unit 9-7
5. Frank R, Overwin H (1996) SPOT synthesis. Epitope analysis with arrays of synthetic peptides prepared on cellulose membranes. Methods Mol Biol 66:149-169
6. Frank R (2002) The SPOT-synthesis technique. Synthetic peptide arrays on membrane supports-principles and applications. J Immunol Methods 267(1):13-26
7. Katz C, Levy-Beladev L, Rotem-Bamberger S, Rito T, Rudiger SG, Friedler A (2011) Studying protein-protein interactions using peptide arrays. Chem Soc Rev 40(5):2131-2145
8. Pluk H, van Hoeve BJ, van Dooren SH, Stammen-Vogelzangs J, van der Heijden A, Schelhaas HJ, Verbeek MM, Badrising UA, Arnardottir S, Gheorghe K, Lundberg IE, Boelens WC, van Engelen BG, Pruijn GJ (2013) Autoantibodies to cytosolic 5'-nucleotidase 1A in inclusion body myositis. Ann Neurol 73(3):397-407
9. Rothenhäusler B, Knoll W (1988) Surface-plasmon microscopy. Nature 332:615-617
10. Lokate AM, Beusink JB, Besselink GA, Pruijn GJ, Schasfoort RB (2007) Biomolecular interaction monitoring of autoantibodies by scanning surface plasmon resonance microarray imaging. J Am Chem Soc 129(45):14013-14018
11. Lam KS, Salmon SE, Hersh EM, Hruby VJ, Kazmierski WM, Knapp RJ (1991) A new type of synthetic peptide library for identifying ligandbinding activity. Nature 354(6348):82-84
12. Jun BH, Kang H, Lee YS, Jeong DH (2012) Fluorescence-based multiplex protein detection using optically encoded microbeads. Molecules 17(3):2474-2490
13. Pande J, Szewczyk MM, Grover AK (2010) Phage display: concept, innovations, applications and future. Biotechnol Adv 28(6):849-858
14. van Beers JJ, Raijmakers R, Alexander LE, Stammen-Vogelzangs J, Lokate AM, Heck AJ, Schasfoort RB, Pruijn GJ (2010) Mapping of citrullinated fi brinogen B-cell epitopes in rheumatoid arthritis by imaging surface plasmon resonance. Arthritis Res Ther 12(6):R219
15. Gauci S, Helbig AO, Slijper M, Krijgsveld J, Heck AJ, Mohammed S (2009) Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach. Anal Chem 81(11):4493-4501