Identification of protein-protein interfaces by decreased amide proton solvent accessibility

Proceedings of the National Academy of Sciences of the United States of America

Volumn 95, Issue 25, 1998, Pages 14705-14710

  Mandell, Jeffrey G ^a   Falick, Arnold M ^a,b   Komives, Elizabeth A ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b PerSeptive Biosystems   (United States)

Author keywords

Cyclic AMP dependent protein kinase; Mass spectrometry; Proton exchange; Thrombin; Thrombomodulin

Indexed keywords

AMIDE; CYCLIC AMP DEPENDENT PROTEIN KINASE; DEUTERIUM; PROTON; THROMBIN; THROMBOMODULIN;

ARTICLE; BINDING SITE; CATALYSIS; DATA ANALYSIS; DESORPTION; DISULFIDE BOND; ENZYME SPECIFICITY; IONIZATION; MASS SPECTROMETRY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN PROTEIN INTERACTION; PROTON TRANSPORT; RELIABILITY; STRUCTURE ACTIVITY RELATION;

AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; CARRIER PROTEINS; CYCLIC AMP-DEPENDENT PROTEIN KINASES; HUMANS; INTRACELLULAR SIGNALING PEPTIDES AND PROTEINS; MASS SPECTROMETRY; MICE; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; PROTEIN CONFORMATION;

EID: 0032428378     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.95.25.14705     Document Type: Article

References (24)

1. Englander, J. J., Rogero, J. R. & Englander, S. W. (1985) Anal. Biochem. 147, 234-244.
2. Smith, D. L., Deng, Y. & Zhang, Z. (1997) J. Mass Spectrom. 32, 135-146.
3. Englander, S. W., Sosnick, T. R., Englander, J. J. & Mayne, L. (1996) Curr. Opin. Struct. Biol. 6, 18-23.
4. Paterson, Y., Englander, S. W. & Roder, H. (1990) Science 249, 755-759.
5. Mayne, L., Paterson, Y., Cerasoli, D. & Englander, S. W. (1992) Biochemistry 31, 10678-10685.
6. Benjamin, D. C., Williams, D. C., Smith-Gill, S. J. & Rule, G. S. (1992) Biochemistry 31, 9539-9545.
7. Orban, J., Alexander, P. & Bryan, P. (1994) Biochemistry 33, 5702-5710.
8. Yi, Q., Erman, J. E. & Satterlee, J. D. (1994) Biochemistry 33, 12032-12041.
9. Williams D. C., Jr., Benjamin D. C., Poljak R. J. & Rule G. S. (1996) J. Mol. Biol. 257, 866-876.
10. Williams D. C., Jr., Rule G. S., Poljak R. J. & Benjamin D. C. (1997) J. Mol. Biol. 270, 751-762.
11. Werner, M. H. & Wemmer, D. E. (1992) J. Mol. Biol. 225, 873-889.
12. Dharmasiri, K. & Smith, D. L. (1996) Anal. Chem. 68, 2340-2344.
13. Zheng, J., Knighton, D., Ten Eyck L., Karlsson, R., Xuong, N.-H., Taylor, S. S. & Sowadski, J. (1993) Biochemistry 32, 2154-2161.
14. Mathews, I. I. Padmanabhan, K. P. & Tulinsky, A. (1994) Biochemistry 33, 13547-13442.
15. Mandell, J. G., Falick, A. M. & Komives, E. A. (1998) Anal. Chem. 70, 3987-3995.
16. White, C. E., Hunter, M. J., Meininger, D. P., White, L. R. & Komives, E. A. (1995) Protein Eng. 8, 1177-1187.
17. Patterson, D. H., Tarr, G. E., Regnier, F. E. & Martin, S. A. (1995) Anal. Chem. 67, 3971-3978.
18. Spengler, B., Kirsch, D. & Kaufmann, R. (1991) Rapid Commun. Mass Spectrom. 5, 198-202.
19. Nicholls, A., Sharp, K. & Honig, B. (1991) Proteins 11, 281-296.
20. Narayana, N., Cox, S., Shaltiel, S., Taylor, S. S. & Xuong, N.-H. (1997) Biochemistry 36, 4438-4448.
21. Narayana, N., Cox, S., Xuong, N.-H. & ten Eyck, L. F. (1997) Structure (London) 5, 1-15.
22. Resing, K. A. & Ahn, N. G. (1998) Biochemistry 37, 463-475.
23. Wu, Q. Y., Sheehan, J. P., Tsiang, M., Lentz, S. R., Birktoft, J. J. & Sadler, J. E. (1991) Proc. Natl. Acad. Sci. USA 88, 6775-6779.
24. Hrabal, R., Komives, E. A. & Ni, F. (1996) Protein Sci. 5, 195-203.