-
2
-
-
27944456827
-
Development and application of proteomics technologies in Saccharomyces cerevisiae
-
Kolkman A, Slijper M, Heck AJ (2005) Development and application of proteomics technologies in Saccharomyces cerevisiae. Trends Biotechnol 23:598-604
-
(2005)
Trends Biotechnol
, vol.23
, pp. 598-604
-
-
Kolkman, A.1
Slijper, M.2
Heck, A.J.3
-
3
-
-
81255197643
-
Yeast an experimental organism for 21st century biology
-
Botstein D, Fink GR (2011) Yeast, an experimental organism for 21st century biology. Genetics 189:695-704
-
(2011)
Genetics
, vol.189
, pp. 695-704
-
-
Botstein, D.1
Fink, G.R.2
-
4
-
-
0037173615
-
Functional profi ling of the Saccharomyces cerevisiae genome
-
Giaever G, Chu AM, Ni L et al (2002) Functional profi ling of the Saccharomyces cerevisiae genome. Nature 418:387-391
-
(2002)
Nature
, vol.418
, pp. 387-391
-
-
Giaever, G.1
Chu, A.M.2
Ni, L.3
-
5
-
-
0142184341
-
Global analysis of protein localization in budding yeast
-
Huh WK, Falvo JV, Gerke LC et al (2003) Global analysis of protein localization in budding yeast. Nature 425:686-691
-
(2003)
Nature
, vol.425
, pp. 686-691
-
-
Huh, W.K.1
Falvo, J.V.2
Gerke, L.C.3
-
6
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
Gavin AC, Bosche M, Krause R et al (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415:141-147
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.C.1
Bosche, M.2
Krause, R.3
-
7
-
-
0142215475
-
Global analysis of protein expression in yeast
-
Ghaemmaghami S, Huh WK, Bower K et al (2003) Global analysis of protein expression in yeast. Nature 425:737-741
-
(2003)
Nature
, vol.425
, pp. 737-741
-
-
Ghaemmaghami, S.1
Huh, W.K.2
Bower, K.3
-
8
-
-
0037050004
-
Systematic identifi cation of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
Ho Y, Gruhler A, Heilbut A et al (2002) Systematic identifi cation of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 415:180-183
-
(2002)
Nature
, vol.415
, pp. 180-183
-
-
Ho, Y.1
Gruhler, A.2
Heilbut, A.3
-
9
-
-
33644555054
-
Proteome survey reveals modularity of the yeast cell machinery
-
Gavin AC, Aloy P, Grandi P et al (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature 440:631-636
-
(2006)
Nature
, vol.440
, pp. 631-636
-
-
Gavin, A.C.1
Aloy, P.2
Grandi, P.3
-
10
-
-
33645453254
-
Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
-
Krogan NJ, Cagney G, Yu H et al (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature 440:637-643
-
(2006)
Nature
, vol.440
, pp. 637-643
-
-
Krogan, N.J.1
Cagney, G.2
Yu, H.3
-
11
-
-
67349225422
-
New dimensions in the study of protein complexes using quantitative mass spectrometry
-
Oeljeklaus S, Meyer HE, Warscheid B (2009) New dimensions in the study of protein complexes using quantitative mass spectrometry. FEBS Lett 583:1674-1683
-
(2009)
FEBS Lett
, vol.583
, pp. 1674-1683
-
-
Oeljeklaus, S.1
Meyer, H.E.2
Warscheid, B.3
-
12
-
-
0036665484
-
Quantitative analysis of the yeast proteome by incorporation of isotopically labeled leucine
-
Jiang H, English AM (2002) Quantitative analysis of the yeast proteome by incorporation of isotopically labeled leucine. J Proteome Res 1:345-350
-
(2002)
J Proteome Res
, vol.1
, pp. 345-350
-
-
Jiang, H.1
English, A.M.2
-
13
-
-
18344389894
-
Stable isotope labelling in vivo as an aid to protein identifi cation in peptide mass fi ngerprinting
-
Pratt JM, Robertson DH, Gaskell SJ et al (2002) Stable isotope labelling in vivo as an aid to protein identifi cation in peptide mass fi ngerprinting. Proteomics 2:157-163
-
(2002)
Proteomics
, vol.2
, pp. 157-163
-
-
Pratt, J.M.1
Robertson, D.H.2
Gaskell, S.J.3
-
14
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
Ong SE, Blagoev B, Kratchmarova I et al (2002) Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics 1:376-386
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
-
15
-
-
0012351964
-
Properties of 13C-substituted arginine in stable isotope labeling by amino acids in cell culture (SILAC
-
Ong SE, Kratchmarova I, Mann M (2003) Properties of 13C-substituted arginine in stable isotope labeling by amino acids in cell culture (SILAC). J Proteome Res 2:173-181
-
(2003)
J Proteome Res
, vol.2
, pp. 173-181
-
-
Ong, S.E.1
Kratchmarova, I.2
Mann, M.3
-
16
-
-
15944377809
-
Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway
-
Gruhler A, Olsen JV, Mohammed S et al (2005) Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway. Mol Cell Proteomics 4:310-327
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 310-327
-
-
Gruhler, A.1
Olsen, J.V.2
Mohammed, S.3
-
17
-
-
52649167339
-
Prevention of amino acid conversion in SILAC experiments with embryonic stem cells
-
Bendall SC, Hughes C, Stewart MH et al (2008) Prevention of amino acid conversion in SILAC experiments with embryonic stem cells. Mol Cell Proteomics 7:1587-1597
-
(2008)
Mol Cell Proteomics
, vol.7
, pp. 1587-1597
-
-
Bendall, S.C.1
Hughes, C.2
Stewart, M.H.3
-
18
-
-
77954695928
-
A genetic engineering solution to the arginine conversion problem" in stable isotope labeling by amino acids in cell culture (SILAC)
-
Bicho CC, de Lima Alves F, Chen ZA et al (2010) A genetic engineering solution to the "arginine conversion problem" in stable isotope labeling by amino acids in cell culture (SILAC). Mol Cell Proteomics 9:1567-1577
-
(2010)
Mol Cell Proteomics
, vol.9
, pp. 1567-1577
-
-
Bicho, C.C.1
De Lima Alves, F.2
Chen, Z.A.3
-
19
-
-
33644524918
-
Mass spectrometrybased proteomics turns quantitative
-
Ong SE, Mann M (2005) Mass spectrometrybased proteomics turns quantitative. Nat Chem Biol 1:252-262
-
(2005)
Nat Chem Biol
, vol.1
, pp. 252-262
-
-
Ong, S.E.1
Mann, M.2
-
20
-
-
34548356772
-
An experimental correction for arginine-to-proline conversion artifacts in SILAC-based quantitative proteomics
-
Van Hoof D, Pinkse MW, Oostwaard DW et al (2007) An experimental correction for arginine-to-proline conversion artifacts in SILAC-based quantitative proteomics. Nat Methods 4:677-678
-
(2007)
Nat Methods
, vol.4
, pp. 677-678
-
-
Van Hoof, D.1
Pinkse, M.W.2
Oostwaard, D.W.3
-
21
-
-
39049117451
-
Identifying dynamic interactors of protein complexes by quantitative mass spectrometry
-
Wang X, Huang L (2008) Identifying dynamic interactors of protein complexes by quantitative mass spectrometry. Mol Cell Proteomics 7: 46-57
-
(2008)
Mol Cell Proteomics
, vol.7
, pp. 46-57
-
-
Wang, X.1
Huang, L.2
-
22
-
-
58149391409
-
Characterization of the human COP9 signalosome complex using affi nity purifi cation and mass spectrometry
-
Fang L, Wang X, Yamoah K et al (2008) Characterization of the human COP9 signalosome complex using affi nity purifi cation and mass spectrometry. J Proteome Res 7:4914-4925
-
(2008)
J Proteome Res
, vol.7
, pp. 4914-4925
-
-
Fang, L.1
Wang, X.2
Yamoah, K.3
-
23
-
-
43849110454
-
Quantitative proteomics reveals regulation of dynamic components within TATAbinding protein (TBP) transcription complexes
-
Mousson F, Kolkman A, Pijnappel WW et al (2008) Quantitative proteomics reveals regulation of dynamic components within TATAbinding protein (TBP) transcription complexes. Mol Cell Proteomics 7:845-852
-
(2008)
Mol Cell Proteomics
, vol.7
, pp. 845-852
-
-
Mousson, F.1
Kolkman, A.2
Pijnappel, W.W.3
-
24
-
-
84859576245
-
Identifi cation of core components and transient interactors of the peroxisomal importomer by dual-track stable isotope labeling with amino acids in cell culture analysis
-
Oeljeklaus S, Reinartz BS, Wolf J et al (2012) Identifi cation of core components and transient interactors of the peroxisomal importomer by dual-track stable isotope labeling with amino acids in cell culture analysis. J Proteome Res 11:2567-2580
-
(2012)
J Proteome Res
, vol.11
, pp. 2567-2580
-
-
Oeljeklaus, S.1
Reinartz, B.S.2
Wolf, J.3
-
25
-
-
84884369584
-
A combined approach of quantitative interaction proteomics and live-cell imaging reveals a regulatory role for ER reticulon homology proteins in peroxisome biogenesis
-
David C, Koch J, Oeljeklaus S et al (2013) A combined approach of quantitative interaction proteomics and live-cell imaging reveals a regulatory role for ER reticulon homology proteins in peroxisome biogenesis. Mol Cell Proteomics 12:2408-2425
-
(2013)
Mol Cell Proteomics
, vol.12
, pp. 2408-2425
-
-
David, C.1
Koch, J.2
Oeljeklaus, S.3
-
26
-
-
83455219457
-
Dual function of Sdh3 in the respiratory chain and TIM22 protein translocase of the mitochondrial inner membrane
-
Gebert N, Gebert M, Oeljeklaus S et al (2011) Dual function of Sdh3 in the respiratory chain and TIM22 protein translocase of the mitochondrial inner membrane. Mol Cell 44: 811-818
-
(2011)
Mol Cell
, vol.44
, pp. 811-818
-
-
Gebert, N.1
Gebert, M.2
Oeljeklaus, S.3
-
27
-
-
84862626955
-
Mgr2 promotes coupling of the mitochondrial presequence translocase to partner complexes
-
Gebert M, Schrempp SG, Mehnert CS et al (2012) Mgr2 promotes coupling of the mitochondrial presequence translocase to partner complexes. J Cell Biol 197:595-604
-
(2012)
J Cell Biol
, vol.197
, pp. 595-604
-
-
Gebert, M.1
Schrempp, S.G.2
Mehnert, C.S.3
-
28
-
-
80054847097
-
Composition and topology of the endoplasmic reticulum-mitochondria encounter structure
-
Stroud DA, Oeljeklaus S, Wiese S et al (2011) Composition and topology of the endoplasmic reticulum-mitochondria encounter structure. J Mol Biol 413:743-750
-
(2011)
J Mol Biol
, vol.413
, pp. 743-750
-
-
Stroud, D.A.1
Oeljeklaus, S.2
Wiese, S.3
-
29
-
-
80054718239
-
Dual role of mitofi lin in mitochondrial membrane organization and protein biogenesis
-
von der Malsburg K, Muller JM, Bohnert M et al (2011) Dual role of mitofi lin in mitochondrial membrane organization and protein biogenesis. Dev Cell 21:694-707
-
(2011)
Dev Cell
, vol.21
, pp. 694-707
-
-
Von Der Malsburg, K.1
Muller, J.M.2
Bohnert, M.3
-
30
-
-
84881141249
-
Coupling of mitochondrial import and export translocases by receptor-mediated supercomplex formation
-
Qiu J, Wenz LS, Zerbes RM et al (2013) Coupling of mitochondrial import and export translocases by receptor-mediated supercomplex formation. Cell 154:596-608
-
(2013)
Cell
, vol.154
, pp. 596-608
-
-
Qiu, J.1
Wenz, L.S.2
Zerbes, R.M.3
-
31
-
-
0000061809
-
Targeted recombination-based cloning and manipulation of large DNA segments in yeast
-
Spencer F, Ketner G, Connelly C et al (1993) Targeted recombination-based cloning and manipulation of large DNA segments in yeast. Methods 5:161-175
-
(1993)
Methods
, vol.5
, pp. 161-175
-
-
Spencer, F.1
Ketner, G.2
Connelly, C.3
-
32
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
33
-
-
57449099865
-
MaxQuant enables high peptide identifi cation rates, individualized p.p.b.-range mass accuracies and proteomewide protein quantifi cation
-
Cox J, Mann M (2008) MaxQuant enables high peptide identifi cation rates, individualized p.p.b.-range mass accuracies and proteomewide protein quantifi cation. Nat Biotechnol 26:1367-1372
-
(2008)
Nat Biotechnol
, vol.26
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
34
-
-
79953701087
-
Andromeda, a peptide search engine integrated into the MaxQuant environment
-
Cox J, Neuhauser N, Michalski A et al (2011) Andromeda, a peptide search engine integrated into the MaxQuant environment. J Proteome Res 10:1794-1805
-
(2011)
J Proteome Res
, vol.10
, pp. 1794-1805
-
-
Cox, J.1
Neuhauser, N.2
Michalski, A.3
-
35
-
-
0032775010
-
Epitope tagging of yeast genes using a PCRbased strategy, more tags and improved practical routines
-
Knop M, Siegers K, Pereira G et al (1999) Epitope tagging of yeast genes using a PCRbased strategy, more tags and improved practical routines. Yeast 15:963-972
-
(1999)
Yeast
, vol.15
, pp. 963-972
-
-
Knop, M.1
Siegers, K.2
Pereira, G.3
-
36
-
-
0032580437
-
An improved protocol for the preparation of yeast cells for transformation by electroporation
-
Thompson JR, Register E, Curotto J et al (1998) An improved protocol for the preparation of yeast cells for transformation by electroporation. Yeast 14:565-571
-
(1998)
Yeast
, vol.14
, pp. 565-571
-
-
Thompson, J.R.1
Register, E.2
Curotto, J.3
-
37
-
-
84864139924
-
SILAC for the study of mammalian cell lines and yeast protein complexes
-
Piechura H, Oeljeklaus S, Warscheid B (2012) SILAC for the study of mammalian cell lines and yeast protein complexes. Methods Mol Biol 893:201-221
-
(2012)
Methods Mol Biol
, vol.893
, pp. 201-221
-
-
Piechura, H.1
Oeljeklaus, S.2
Warscheid, B.3
-
38
-
-
77952344256
-
Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions
-
Hubner NC, Bird AW, Cox J et al (2010) Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactions. J Cell Biol 189:739-754
-
(2010)
J Cell Biol
, vol.189
, pp. 739-754
-
-
Hubner, N.C.1
Bird, A.W.2
Cox, J.3
-
39
-
-
0037088811
-
A second set of loxP marker cassettes for Cre-mediated multiple gene knockouts in budding yeast
-
Gueldener U, Heinisch J, Koehler GJ et al (2002) A second set of loxP marker cassettes for Cre-mediated multiple gene knockouts in budding yeast. Nucleic Acids Res 30:e23
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Gueldener, U.1
Heinisch, J.2
Koehler, G.J.3
-
40
-
-
0029994841
-
A new effi cient gene disruption cassette for repeated use in budding yeast
-
Gueldener U, Heck S, Fielder T et al (1996) A new effi cient gene disruption cassette for repeated use in budding yeast. Nucleic Acids Res 24:2519-2524
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 2519-2524
-
-
Gueldener, U.1
Heck, S.2
Fielder, T.3
|