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Volumn 519, Issue 7544, 2015, Pages 482-485

N6-methyladenosine marks primary microRNAs for processing

Author keywords

[No Author keywords available]

Indexed keywords

6 N METHYLADENOSINE; DOUBLE STRANDED DNA; METHYLTRANSFERASE; METHYLTRANSFERASE LIKE 3; MICRORNA; PROTEIN DGCR8; RIBONUCLEASE; RNA BINDING PROTEIN; SINGLE STRANDED RNA; TYPE III RNASE DROSHA; UNCLASSIFIED DRUG; ADENOSINE; DGCR8 PROTEIN, HUMAN; METTL3 PROTEIN, HUMAN; N(6)-METHYLADENOSINE;

EID: 84925796024     PISSN: 00280836     EISSN: 14764687     Source Type: Journal    
DOI: 10.1038/nature14281     Document Type: Article
Times cited : (1053)

References (26)
  • 1
    • 9144224451 scopus 로고    scopus 로고
    • Processing of primary microRNAs by the Microprocessor complex
    • Denli, A. M., Tops, B. B., Plasterk, R. H., Ketting, R. F. & Hannon, G. J. Processing of primary microRNAs by the Microprocessor complex. Nature 432, 231-235 (2004).
    • (2004) Nature , vol.432 , pp. 231-235
    • Denli, A.M.1    Tops, B.B.2    Plasterk, R.H.3    Ketting, R.F.4    Hannon, G.J.5
  • 2
    • 9144225636 scopus 로고    scopus 로고
    • The Microprocessor complex mediates the genesis of microRNAs
    • Gregory, R. I. et al. The Microprocessor complex mediates the genesis of microRNAs. Nature 432, 235-240 (2004).
    • (2004) Nature , vol.432 , pp. 235-240
    • Gregory, R.I.1
  • 3
    • 10644234841 scopus 로고    scopus 로고
    • The Drosha-DGCR8 complex in primary microRNAprocessing
    • Han, J. et al. The Drosha-DGCR8 complex in primary microRNAprocessing. Genes Dev. 18, 3016-3027 (2004).
    • (2004) Genes Dev. , vol.18 , pp. 3016-3027
    • Han, J.1
  • 4
    • 10344248903 scopus 로고    scopus 로고
    • The human DiGeorge syndrome critical region gene 8 and ItsD.melanogaster homolog are required for miRNAbiogenesis.
    • Landthaler, M., Yalcin, A. & Tuschl, T. The human DiGeorge syndrome critical region gene 8 and ItsD. melanogaster homolog are required for miRNAbiogenesis. Curr. Biol. 14, 2162-2167 (2004).
    • (2004) Curr. Biol. , vol.14 , pp. 2162-2167
    • Landthaler, M.1    Yalcin, A.2    Tuschl, T.3
  • 5
    • 33744520104 scopus 로고    scopus 로고
    • Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex
    • Han, J. et al. Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex. Cell 125, 887-901 (2006).
    • (2006) Cell , vol.125 , pp. 887-901
    • Han, J.1
  • 6
    • 35348955882 scopus 로고    scopus 로고
    • A universal framework for regulatory element discovery across all genomes and data types
    • Elemento, O., Slonim, N. & Tavazoie, S. A universal framework for regulatory element discovery across all genomes and data types. Mol. Cell 28, 337-350 (2007).
    • (2007) Mol. Cell , vol.28 , pp. 337-350
    • Elemento, O.1    Slonim, N.2    Tavazoie, S.3
  • 7
    • 0017367836 scopus 로고
    • Nucleotide sequences at the N6-methyladenosine sites of HeLa cell messenger ribonucleic acid
    • Wei, C. M. & Moss, B. Nucleotide sequences at the N6-methyladenosine sites of HeLa cell messenger ribonucleic acid. Biochemistry 16, 1672-1676 (1977).
    • (1977) Biochemistry , vol.16 , pp. 1672-1676
    • Wei, C.M.1    Moss, B.2
  • 8
    • 84860779086 scopus 로고    scopus 로고
    • Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
    • Dominissini, D. et al. Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq. Nature 485, 201-206 (2012).
    • (2012) Nature , vol.485 , pp. 201-206
    • Dominissini, D.1
  • 9
    • 84862649489 scopus 로고    scopus 로고
    • Comprehensive analysis of mRNA methylation reveals enrichment in 39 UTRs and near stop codons
    • Meyer, K. D. et al. Comprehensive analysis of mRNA methylation reveals enrichment in 39 UTRs and near stop codons. Cell 149, 1635-1646 (2012).
    • (2012) Cell , vol.149 , pp. 1635-1646
    • Meyer, K.D.1
  • 10
    • 0030712151 scopus 로고    scopus 로고
    • Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase.
    • Bokar, J. A., Shambaugh, M. E., Polayes, D., Matera, A. G. & Rottman, F. M. Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase. RNA 3, 1233-1247 (1997).
    • (1997) RNA , vol.3 , pp. 1233-1247
    • Bokar, J.A.1    Shambaugh, M.E.2    Polayes, D.3    Matera, A.G.4    Rottman, F.M.5
  • 11
    • 84879146658 scopus 로고    scopus 로고
    • Mapping and significance of the mRNA methylome
    • Sibbritt, T., Patel, H. R. & Preiss, T. Mapping and significance of the mRNA methylome. RNA 4, 397-422 (2013).
    • (2013) RNA , vol.4 , pp. 397-422
    • Sibbritt, T.1    Patel, H.R.2    Preiss, T.3
  • 12
    • 0021398869 scopus 로고
    • Effect of undermethylation on mRNA cytoplasmic appearance and half-life.
    • Camper, S. A., Albers, R. J., Coward, J. K. & Rottman, F. M. Effect of undermethylation on mRNA cytoplasmic appearance and half-life. Mol. Cell. Biol. 4, 538-543 (1984).
    • (1984) Mol. Cell. Biol. , vol.4 , pp. 538-543
    • Camper, S.A.1    Albers, R.J.2    Coward, J.K.3    Rottman, F.M.4
  • 13
    • 0025193111 scopus 로고
    • N6-methyladenosine residues in an intron-specific regionofprolactinpre-mRNA
    • Carroll, S. M., Narayan, P. & Rottman, F. M. N6-methyladenosine residues in an intron-specific regionofprolactinpre-mRNA.Mol.Cell. Biol. 10, 4456-4465(1990).
    • (1990) Mol.Cell Biol. , vol.10 , pp. 4456-4465
    • Carroll, S.M.1    Narayan, P.2    Rottman, F.M.3
  • 14
    • 84875634162 scopus 로고    scopus 로고
    • Integrative Genomics Viewer (IGV): High-performance genomics data visualization and exploration.
    • Thorvaldsdóttir, H., Robinson, J. T. & Mesirov, J. P. Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration. Brief. Bioinform. 14, 178-192 (2013).
    • (2013) Brief. Bioinform. , vol.14 , pp. 178-192
    • Thorvaldsdóttir, H.1    Robinson, J.T.2    Mesirov, J.P.3
  • 15
    • 0036788427 scopus 로고    scopus 로고
    • Structure prediction and phylogenetic analysis of a functionally diverse family of proteins homologous to the MT-A70 subunit of the human mRNA:m6A methyltransferase.
    • Bujnicki, J. M., Feder, M., Radlinska, M. & Blumenthal, R. M. Structure prediction and phylogenetic analysis of a functionally diverse family of proteins homologous to the MT-A70 subunit of the human mRNA:m6A methyltransferase. J. Mol. Evol. 55, 431-444 (2002).
    • (2002) J. Mol. Evol. , vol.55 , pp. 431-444
    • Bujnicki, J.M.1    Feder, M.2    Radlinska, M.3    Blumenthal, R.M.4
  • 16
    • 67749132423 scopus 로고    scopus 로고
    • Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
    • Chi, S. W., Zang, J. B., Mele, A. & Darnell, R. B. Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. Nature 460, 479-486 (2009).
    • (2009) Nature , vol.460 , pp. 479-486
    • Chi, S.W.1    Zang, J.B.2    Mele, A.3    Darnell, R.B.4
  • 17
    • 74949092081 scopus 로고    scopus 로고
    • Detection of nonneutral substitution rates onmammalian phylogenies
    • Pollard, K. S., Hubisz, M. J., Rosenbloom, K. R. & Siepel, A. Detection of nonneutral substitution rates onmammalian phylogenies. GenomeRes. 20, 110-121 (2010).
    • (2010) Genome Res , vol.20 , pp. 110-121
    • Pollard, K.S.1    Hubisz, M.J.2    Rosenbloom, K.R.3    Siepel, A.4
  • 18
    • 42949179593 scopus 로고    scopus 로고
    • In vitro and in vivo assays for the activity of Drosha complex.
    • Lee, Y. & Kim, V. N. In vitro and In vivo assays for the activity of Drosha complex. Methods Enzymol. 427, 87-106 (2007).
    • (2007) Methods Enzymol. , vol.427 , pp. 87-106
    • Lee, Y.1    Kim, V.N.2
  • 19
    • 84874086395 scopus 로고    scopus 로고
    • Beyondsecondary structure: Primary-sequence determinants license pri-miRNA hairpins for processing.
    • Auyeung, V. C., Ulitsky, I., McGeary, S. E.&Bartel, D. P. Beyondsecondary structure: primary-sequence determinants license pri-miRNA hairpins for processing. Cell 152, 844-858 (2013).
    • (2013) Cell , vol.152 , pp. 844-858
    • Auyeung, V.C.1    Ulitsky, I.2    McGeary, S.E.3    Bartel, D.P.4
  • 20
    • 38049115129 scopus 로고    scopus 로고
    • Endogenous humanmicroRNAs that suppress breast cancer metastasis
    • Tavazoie, S. F. et al. Endogenous humanmicroRNAs that suppress breast cancer metastasis. Nature 451, 147-152 (2008).
    • (2008) Nature , vol.451 , pp. 147-152
    • Tavazoie, S.F.1
  • 21
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2.
    • Langmead, B.&Salzberg, S. L. Fast gapped-read alignment with Bowtie 2. Nature Methods 9, 357-359 (2012).
    • (2012) Nature Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 22
    • 79959920881 scopus 로고    scopus 로고
    • An integrated ChIP-seq analysis platform with customizable workflows
    • Giannopoulou, E. G. & Elemento, O. An integrated ChIP-seq analysis platform with customizable workflows. BMC Bioinformatics 12, 277 (2011).
    • (2011) BMC Bioinformatics , vol.12 , pp. 277
    • Giannopoulou, E.G.1    Elemento, O.2
  • 23
    • 79960230895 scopus 로고    scopus 로고
    • Mapping in vivo protein-RNA interactions at singlenucleotide resolution from HITS-CLIP data
    • Zhang, C. & Darnell, R. B. Mapping in vivo protein-RNA interactions at singlenucleotide resolution from HITS-CLIP data. Nature Biotechnol. 29, 607-614 (2011).
    • (2011) Nature Biotechnol. , vol.29 , pp. 607-614
    • Zhang, C.1    Darnell, R.B.2
  • 24
    • 84862520770 scopus 로고    scopus 로고
    • Fiji: An open-source platform for biological-image analysis
    • Schindelin, J. et al. Fiji: an open-source platform for biological-image analysis. Nature Methods 9, 676-682 (2012).
    • (2012) Nature Methods , vol.9 , pp. 676-682
    • Schindelin, J.1
  • 25
    • 77954138395 scopus 로고    scopus 로고
    • A sensitive non-radioactive northern blot method to detect small RNAs
    • Kim, S. W. et al. A sensitive non-radioactive northern blot method to detect small RNAs. Nucleic Acids Res. 38, e98 (2010).
    • (2010) Nucleic Acids Res. , vol.38 , pp. e98
    • Kim, S.W.1
  • 26
    • 84919457819 scopus 로고    scopus 로고
    • M6A RNA modification controls cell fate transition in mammalian embryonic stem cells
    • Batista, P. J. et al. m6A RNA modification controls cell fate transition in mammalian embryonic stem cells. Cell Stem Cell 15, 707-719 (2014).
    • (2014) Cell Stem Cell , vol.15 , pp. 707-719
    • Batista, P.J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.