메뉴 건너뛰기




Volumn 149, Issue 3, 2015, Pages 767-779

Methylation profiling of 48 candidate genes in tumor and matched normal tissues from breast cancer patients

Author keywords

Biomarker; Breast cancer; Candidate gene; Methylation; Microfluidic PCR; Next generation sequencing

Indexed keywords

BISULFITE; ESTROGEN RECEPTOR; TUMOR MARKER; TUMOR PROTEIN;

EID: 84925533283     PISSN: 01676806     EISSN: 15737217     Source Type: Journal    
DOI: 10.1007/s10549-015-3276-8     Document Type: Article
Times cited : (52)

References (36)
  • 1
    • 84892961071 scopus 로고    scopus 로고
    • GLOBOCAN 2012 v1.0, cancer incidence and mortality worldwide: IARC CancerBase No
    • International Agency for Research on Cancer, Lyon:
    • Ferlay J SI, Ervik M, Dikshit R, Eser S, Mathers C, Rebelo M, Parkin DM, Forman D, Bray F (2013) GLOBOCAN 2012 v1.0, cancer incidence and mortality worldwide: IARC CancerBase No. 11 [Internet]. International Agency for Research on Cancer, Lyon. http://globocan.iarc.fr. Accessed on 17 Aug 2014
    • (2013) 11 [Internet]
    • Ferlay, J.S.I.1    Ervik, M.2    Dikshit, R.3    Eser, S.4    Mathers, C.5    Rebelo, M.6    Parkin, D.M.7    Forman, D.8    Bray, F.9
  • 3
    • 29244469466 scopus 로고    scopus 로고
    • The epigenetic progenitor origin of human cancer
    • COI: 1:CAS:528:DC%2BD2MXhtlanu73E, PID: 16369569
    • Feinberg AP, Ohlsson R, Henikoff S (2006) The epigenetic progenitor origin of human cancer. Nat Rev Genet 7(1):21–33. doi:10.1038/nrg1748
    • (2006) Nat Rev Genet , vol.7 , Issue.1 , pp. 21-33
    • Feinberg, A.P.1    Ohlsson, R.2    Henikoff, S.3
  • 4
    • 33847065486 scopus 로고    scopus 로고
    • The epigenomics of cancer
    • COI: 1:CAS:528:DC%2BD2sXis12ju7k%3D, PID: 17320506
    • Jones PA, Baylin SB (2007) The epigenomics of cancer. Cell 128(4):683–692. doi:10.1016/j.cell.2007.01.029
    • (2007) Cell , vol.128 , Issue.4 , pp. 683-692
    • Jones, P.A.1    Baylin, S.B.2
  • 5
    • 78650348240 scopus 로고    scopus 로고
    • Improving early breast cancer detection: focus on methylation
    • COI: 1:STN:280:DC%2BC3M%2FkvFGnsQ%3D%3D, PID: 20591821
    • Suijkerbuijk KP, van Diest PJ, van der Wall E (2011) Improving early breast cancer detection: focus on methylation. Ann Oncol 22(1):24–29. doi:10.1093/annonc/mdq305
    • (2011) Ann Oncol , vol.22 , Issue.1 , pp. 24-29
    • Suijkerbuijk, K.P.1    van Diest, P.J.2    van der Wall, E.3
  • 6
    • 33947315736 scopus 로고    scopus 로고
    • Cancer epigenomics: DNA methylomes and histone-modification maps
    • COI: 1:CAS:528:DC%2BD2sXivVGktbk%3D, PID: 17339880
    • Esteller M (2007) Cancer epigenomics: DNA methylomes and histone-modification maps. Nat Rev Genet 8(4):286–298. doi:10.1038/nrg2005
    • (2007) Nat Rev Genet , vol.8 , Issue.4 , pp. 286-298
    • Esteller, M.1
  • 7
    • 79551513940 scopus 로고    scopus 로고
    • Hypermethylation of tumor suppressor genes involved in critical regulatory pathways for developing a blood-based test in breast cancer
    • COI: 1:CAS:528:DC%2BC3MXhs1Glsr8%3D, PID: 21283676
    • Radpour R, Barekati Z, Kohler C, Lv Q, Burki N, Diesch C, Bitzer J, Zheng H, Schmid S, Zhong XY (2011) Hypermethylation of tumor suppressor genes involved in critical regulatory pathways for developing a blood-based test in breast cancer. PLoS One 6(1):e16080. doi:10.1371/journal.pone.0016080
    • (2011) PLoS One , vol.6 , Issue.1 , pp. e16080
    • Radpour, R.1    Barekati, Z.2    Kohler, C.3    Lv, Q.4    Burki, N.5    Diesch, C.6    Bitzer, J.7    Zheng, H.8    Schmid, S.9    Zhong, X.Y.10
  • 10
    • 84872168031 scopus 로고    scopus 로고
    • Promoter hypermethylation of the tumor-suppressor genes ITIH5, DKK3, and RASSF1A as novel biomarkers for blood-based breast cancer screening
    • COI: 1:CAS:528:DC%2BC3sXjslyru7s%3D, PID: 23320751
    • Kloten V, Becker B, Winner K, Schrauder MG, Fasching PA, Anzeneder T, Veeck J, Hartmann A, Knuchel R, Dahl E (2013) Promoter hypermethylation of the tumor-suppressor genes ITIH5, DKK3, and RASSF1A as novel biomarkers for blood-based breast cancer screening. Breast Cancer Res 15(1):R4. doi:10.1186/bcr3375
    • (2013) Breast Cancer Res , vol.15 , Issue.1 , pp. R4
    • Kloten, V.1    Becker, B.2    Winner, K.3    Schrauder, M.G.4    Fasching, P.A.5    Anzeneder, T.6    Veeck, J.7    Hartmann, A.8    Knuchel, R.9    Dahl, E.10
  • 12
    • 31544435739 scopus 로고    scopus 로고
    • Breast cancer DNA methylation profiles in cancer cells and tumor stroma: association with HER-2/neu status in primary breast cancer
    • COI: 1:CAS:528:DC%2BD28XhsFWgug%3D%3D, PID: 16397211
    • Fiegl H, Millinger S, Goebel G, Muller-Holzner E, Marth C, Laird PW, Widschwendter M (2006) Breast cancer DNA methylation profiles in cancer cells and tumor stroma: association with HER-2/neu status in primary breast cancer. Cancer Res 66(1):29–33. doi:10.1158/0008-5472.CAN-05-2508
    • (2006) Cancer Res , vol.66 , Issue.1 , pp. 29-33
    • Fiegl, H.1    Millinger, S.2    Goebel, G.3    Muller-Holzner, E.4    Marth, C.5    Laird, P.W.6    Widschwendter, M.7
  • 15
    • 77950409567 scopus 로고    scopus 로고
    • Genome-wide analysis of aberrant methylation in human breast cancer cells using methyl-DNA immunoprecipitation combined with high-throughput sequencing
    • PID: 20181289
    • Ruike Y, Imanaka Y, Sato F, Shimizu K, Tsujimoto G (2010) Genome-wide analysis of aberrant methylation in human breast cancer cells using methyl-DNA immunoprecipitation combined with high-throughput sequencing. BMC Genomics 11:137. doi:10.1186/1471-2164-11-137
    • (2010) BMC Genomics , vol.11 , pp. 137
    • Ruike, Y.1    Imanaka, Y.2    Sato, F.3    Shimizu, K.4    Tsujimoto, G.5
  • 16
    • 79954623906 scopus 로고    scopus 로고
    • Genome-wide DNA methylation profiling of CpG islands in breast cancer identifies novel genes associated with tumorigenicity
    • COI: 1:CAS:528:DC%2BC3MXkslWjsL4%3D, PID: 21363912
    • Hill VK, Ricketts C, Bieche I, Vacher S, Gentle D, Lewis C, Maher ER, Latif F (2011) Genome-wide DNA methylation profiling of CpG islands in breast cancer identifies novel genes associated with tumorigenicity. Cancer Res 71(8):2988–2999. doi:10.1158/0008-5472.CAN-10-4026
    • (2011) Cancer Res , vol.71 , Issue.8 , pp. 2988-2999
    • Hill, V.K.1    Ricketts, C.2    Bieche, I.3    Vacher, S.4    Gentle, D.5    Lewis, C.6    Maher, E.R.7    Latif, F.8
  • 18
    • 84877028141 scopus 로고    scopus 로고
    • Comprehensive molecular portraits of human breast tumours
    • Cancer Genome Atlas N (2012) Comprehensive molecular portraits of human breast tumours. Nature 490(7418):61–70. doi:10.1038/nature11412
    • (2012) Nature , vol.490 , Issue.7418 , pp. 61-70
    • Cancer Genome Atlas, N.1
  • 20
    • 84883325272 scopus 로고    scopus 로고
    • Personalizing the treatment of women with early breast cancer: highlights of the St Gallen International Expert Consensus on the Primary Therapy of Early Breast Cancer 2013
    • COI: 1:STN:280:DC%2BC3sfmvFajuw%3D%3D, PID: 23917950
    • Goldhirsch A, Winer EP, Coates AS, Gelber RD, Piccart-Gebhart M, Thurlimann B, Senn HJ, Panel members (2013) Personalizing the treatment of women with early breast cancer: highlights of the St Gallen International Expert Consensus on the Primary Therapy of Early Breast Cancer 2013. Ann Oncol 24(9):2206–2223. doi:10.1093/annonc/mdt303
    • (2013) Ann Oncol , vol.24 , Issue.9 , pp. 2206-2223
    • Goldhirsch, A.1    Winer, E.P.2    Coates, A.S.3    Gelber, R.D.4    Piccart-Gebhart, M.5    Thurlimann, B.6    Senn, H.J.7    Panel members8
  • 21
    • 77956296566 scopus 로고    scopus 로고
    • Bisulfite patch PCR enables multiplexed sequencing of promoter methylation across cancer samples
    • COI: 1:CAS:528:DC%2BC3cXhtFeru7vE, PID: 20627893
    • Varley KE, Mitra RD (2010) Bisulfite patch PCR enables multiplexed sequencing of promoter methylation across cancer samples. Genome Res 20(9):1279–1287. doi:10.1101/gr.101212.109
    • (2010) Genome Res , vol.20 , Issue.9 , pp. 1279-1287
    • Varley, K.E.1    Mitra, R.D.2
  • 23
    • 0002294347 scopus 로고
    • A simple sequentially rejective multiple test procedure
    • Holm S (1979) A simple sequentially rejective multiple test procedure. Scand J Stat 6(2):65–70
    • (1979) Scand J Stat , vol.6 , Issue.2 , pp. 65-70
    • Holm, S.1
  • 24
    • 84859345581 scopus 로고    scopus 로고
    • Microfluidic amplification as a tool for massive parallel sequencing of the familial hypercholesterolemia genes
    • COI: 1:CAS:528:DC%2BC38XlsVCms70%3D, PID: 22294733
    • Hollants S, Redeker EJ, Matthijs G (2012) Microfluidic amplification as a tool for massive parallel sequencing of the familial hypercholesterolemia genes. Clin Chem 58(4):717–724. doi:10.1373/clinchem.2011.173963
    • (2012) Clin Chem , vol.58 , Issue.4 , pp. 717-724
    • Hollants, S.1    Redeker, E.J.2    Matthijs, G.3
  • 30
    • 69249129052 scopus 로고    scopus 로고
    • Methylation profiles of 22 candidate genes in breast cancer using high-throughput MALDI-TOF mass array
    • COI: 1:CAS:528:DC%2BD1MXntVWit74%3D, PID: 19503099
    • Radpour R, Kohler C, Haghighi MM, Fan AX, Holzgreve W, Zhong XY (2009) Methylation profiles of 22 candidate genes in breast cancer using high-throughput MALDI-TOF mass array. Oncogene 28(33):2969–2978. doi:10.1038/onc.2009.149
    • (2009) Oncogene , vol.28 , Issue.33 , pp. 2969-2978
    • Radpour, R.1    Kohler, C.2    Haghighi, M.M.3    Fan, A.X.4    Holzgreve, W.5    Zhong, X.Y.6
  • 32
    • 84896824981 scopus 로고    scopus 로고
    • Identification and characterization of locus-specific methylation patterns within novel loci undergoing hypermethylation during breast cancer pathogenesis
    • PID: 24490656
    • Wojdacz TK, Windelov JA, Thestrup BB, Damsgaard TE, Overgaard J, Hansen L (2014) Identification and characterization of locus-specific methylation patterns within novel loci undergoing hypermethylation during breast cancer pathogenesis. Breast Cancer Res 16(1):R17. doi:10.1186/bcr3612
    • (2014) Breast Cancer Res , vol.16 , Issue.1 , pp. R17
    • Wojdacz, T.K.1    Windelov, J.A.2    Thestrup, B.B.3    Damsgaard, T.E.4    Overgaard, J.5    Hansen, L.6
  • 33
    • 84878767532 scopus 로고    scopus 로고
    • DNA promoter hypermethylation profiles in breast duct fluid
    • COI: 1:CAS:528:DC%2BC3sXptVCisrg%3D, PID: 23674191
    • Twelves D, Nerurkar A, Osin P, Dexter T, Ward A, Gui GP, Isacke CM (2013) DNA promoter hypermethylation profiles in breast duct fluid. Breast Cancer Res Treat 139(2):341–350. doi:10.1007/s10549-013-2544-8
    • (2013) Breast Cancer Res Treat , vol.139 , Issue.2 , pp. 341-350
    • Twelves, D.1    Nerurkar, A.2    Osin, P.3    Dexter, T.4    Ward, A.5    Gui, G.P.6    Isacke, C.M.7
  • 34
    • 84890430546 scopus 로고    scopus 로고
    • Differential methylation relative to breast cancer subtype and matched normal tissue reveals distinct patterns
    • COI: 1:CAS:528:DC%2BC3sXhslGlsrfL, PID: 24212716
    • Bardowell SA, Parker J, Fan C, Crandell J, Perou CM, Swift-Scanlan T (2013) Differential methylation relative to breast cancer subtype and matched normal tissue reveals distinct patterns. Breast Cancer Res Treat 142(2):365–380. doi:10.1007/s10549-013-2738-0
    • (2013) Breast Cancer Res Treat , vol.142 , Issue.2 , pp. 365-380
    • Bardowell, S.A.1    Parker, J.2    Fan, C.3    Crandell, J.4    Perou, C.M.5    Swift-Scanlan, T.6
  • 36
    • 77957859971 scopus 로고    scopus 로고
    • Estrogen and progesterone receptor status affect genome-wide DNA methylation profile in breast cancer
    • COI: 1:CAS:528:DC%2BC3cXht1KqurfN, PID: 20724461
    • Li L, Lee KM, Han W, Choi JY, Lee JY, Kang GH, Park SK, Noh DY, Yoo KY, Kang D (2010) Estrogen and progesterone receptor status affect genome-wide DNA methylation profile in breast cancer. Hum Mol Genet 19(21):4273–4277. doi:10.1093/hmg/ddq351
    • (2010) Hum Mol Genet , vol.19 , Issue.21 , pp. 4273-4277
    • Li, L.1    Lee, K.M.2    Han, W.3    Choi, J.Y.4    Lee, J.Y.5    Kang, G.H.6    Park, S.K.7    Noh, D.Y.8    Yoo, K.Y.9    Kang, D.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.