-
1
-
-
84871787691
-
Data mining in the life sciences with random forest: a walk in the park or lost in the jungle?
-
Touw WG, Bayjanov JR, Overmars L, et al. Data mining in the life sciences with random forest: a walk in the park or lost in the jungle? Brief Bioinform 2013;14:315-26.
-
(2013)
Brief Bioinform
, vol.14
, pp. 315-326
-
-
Touw, W.G.1
Bayjanov, J.R.2
Overmars, L.3
-
2
-
-
71249153009
-
Evaluation of random forests performance for genome-wide association studies in the presence of interaction effects
-
Kim Y, Wojciechowski R, Sung H, et al. Evaluation of random forests performance for genome-wide association studies in the presence of interaction effects. BMC Proceedings 2009;3:S64.
-
(2009)
BMC Proceedings
, vol.3
, pp. S64
-
-
Kim, Y.1
Wojciechowski, R.2
Sung, H.3
-
6
-
-
84930469116
-
-
Florida: CRC Press
-
Fisher DL, Rizzo M, Caird J, et al. Handbook of Driving Simulation for Engineering, Medicine, and Psychology. Florida: CRC Press, 2011.
-
(2011)
Handbook of Driving Simulation for Engineering, Medicine, and Psychology
-
-
Fisher, D.L.1
Rizzo, M.2
Caird, J.3
-
8
-
-
0036797562
-
Epistasis: what it means, what it doesn't mean, and statistical methods to detect it in humans
-
Cordell HJ. Epistasis: what it means, what it doesn't mean, and statistical methods to detect it in humans. Hum Mol Genet 2002;11:2463-8.
-
(2002)
Hum Mol Genet
, vol.11
, pp. 2463-2468
-
-
Cordell, H.J.1
-
9
-
-
84971185409
-
XV-the correlation between relatives on the supposition of Mendelian inheritance
-
Fisher RA. XV-the correlation between relatives on the supposition of Mendelian inheritance. TRSoc Edin 1918;52: 399-433.
-
(1918)
TRSoc Edin
, vol.52
, pp. 399-433
-
-
Fisher, R.A.1
-
11
-
-
84867083314
-
SNP interaction detection with random forests in high-dimensional genetic data
-
Winham S, Colby C, Freimuth R, et al. SNP interaction detection with random forests in high-dimensional genetic data. BMC Bioinformatics 2012;13:164.
-
(2012)
BMC Bioinformatics
, vol.13
, pp. 164
-
-
Winham, S.1
Colby, C.2
Freimuth, R.3
-
12
-
-
11244293921
-
A global view of epistasis
-
Moore HA. A global view of epistasis. Nat Genet 2005;37: 13-14.
-
(2005)
Nat Genet
, vol.37
, pp. 13-14
-
-
Moore, H.A.1
-
13
-
-
33749677657
-
Unbiased recursive partitioning: A conditional inference framework
-
Hothorn T, Hornik K, Zeileis A. Unbiased recursive partitioning: A conditional inference framework. JComputGraph Stat 2006;15:651-74.
-
(2006)
JComputGraph Stat
, vol.15
, pp. 651-674
-
-
Hothorn, T.1
Hornik, K.2
Zeileis, A.3
-
16
-
-
84887476291
-
Genome-wide analysis of A-to-I RNA editing by single-molecule sequencing in drosophila
-
St Laurent G, Tackett MR, Nechkin S, et al. Genome-wide analysis of A-to-I RNA editing by single-molecule sequencing in drosophila. Nat StructMol Biol 2013;20:1333-9.
-
(2013)
Nat StructMol Biol
, vol.20
, pp. 1333-1339
-
-
St Laurent, G.1
Tackett, M.R.2
Nechkin, S.3
-
17
-
-
33847096395
-
Bias in random forest variable importance measures: Illustrations, sources and a solution
-
Strobl C, Boulesteix AL, Zeileis A, et al. Bias in random forest variable importance measures: Illustrations, sources and a solution. BMC Bioinformatics 2007;8:25.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 25
-
-
Strobl, C.1
Boulesteix, A.L.2
Zeileis, A.3
-
18
-
-
82255174148
-
Letter to the editor: On the stability and ranking of predictors from random forest variable importance measures
-
Nicodemus KK. Letter to the editor: On the stability and ranking of predictors from random forest variable importance measures. Brief Bioinform 2011;12:369-73.
-
(2011)
Brief Bioinform
, vol.12
, pp. 369-373
-
-
Nicodemus, K.K.1
-
19
-
-
84861813244
-
Random forest Gini importance favours SNPs with large minor allele frequency: assessment, sources and recommendations
-
Boulesteix AL, Bender A, Lorenzo Bermejo J, et al. Random forest Gini importance favours SNPs with large minor allele frequency: assessment, sources and recommendations. Brief Bioinform 2012;13:292-304.
-
(2012)
Brief Bioinform
, vol.13
, pp. 292-304
-
-
Boulesteix, A.L.1
Bender, A.2
Lorenzo Bermejo, J.3
-
20
-
-
0035515549
-
Criticality of predictors in multiple regression
-
Azen R, Budescu CV, Reiser B. Criticality of predictors in multiple regression. BritJMath Stat Psy 2001;54:201-25.
-
(2001)
BritJMath Stat Psy
, vol.54
, pp. 201-225
-
-
Azen, R.1
Budescu, C.V.2
Reiser, B.3
-
21
-
-
84873167556
-
Random Forests-original implementation
-
24 March 2014, date last accessed
-
Breiman L, Cutler A. Random Forests-original implementation. http://www.stat.berkeley.edu/~breiman/RandomForests/, 2004 (24 March 2014, date last accessed).
-
(2004)
-
-
Breiman, L.1
Cutler, A.2
-
22
-
-
84868022340
-
Breiman and Cutler's Random Forests for Classification and Regression
-
URL, 24 March 2014, date last accessed
-
Liaw A, Wiener M. Breiman and Cutler's Random Forests for Classification and Regression, 2012. URL http://CRAN.R-project.org/. R package version 4.6-7. (24 March 2014, date last accessed).
-
(2012)
-
-
Liaw, A.1
Wiener, M.2
-
23
-
-
72449170109
-
An introduction to recursive partitioning: rationale, application, and characteristics of classification and regression trees, bagging, and random forests
-
Strobl C, Malley JD, Tutz G. An introduction to recursive partitioning: rationale, application, and characteristics of classification and regression trees, bagging, and random forests. PsycholMethods 2009;14:323-48.
-
(2009)
PsycholMethods
, vol.14
, pp. 323-348
-
-
Strobl, C.1
Malley, J.D.2
Tutz, G.3
-
24
-
-
84873187093
-
Overview of random forest methodology and practical guidance with emphasis on computational biology and bioinformatics
-
Boulesteix AL, Janitza S, Kruppa J, et al. Overview of random forest methodology and practical guidance with emphasis on computational biology and bioinformatics. Wiley Interdiscipl Rev Data Mining Knowl Discov 2012;2: 493-507.
-
(2012)
Wiley Interdiscipl Rev Data Mining Knowl Discov
, vol.2
, pp. 493-507
-
-
Boulesteix, A.L.1
Janitza, S.2
Kruppa, J.3
-
26
-
-
30644464444
-
Gene selection and classification of microarray data using random forest
-
Di{dotless}az-Uriarte R, Alvarez De AS. Gene selection and classification of microarray data using random forest. BMC Bioinformatics 2006;7:3.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 3
-
-
Díaz-Uriarte, R.1
Alvarez De, A.S.2
-
27
-
-
48549094895
-
A comprehensive comparison of random forests and support vector machines for microarray-based cancer classification
-
Statnikov A, Wang L, Aliferis CF. A comprehensive comparison of random forests and support vector machines for microarray-based cancer classification. BMC Bioinformatics 2008;9:319.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 319
-
-
Statnikov, A.1
Wang, L.2
Aliferis, C.F.3
-
28
-
-
70450064693
-
Variable importance assessment in regression: linear regression versus random forest
-
Grömping U. Variable importance assessment in regression: linear regression versus random forest. Am Stat 2009;63: 308-19.
-
(2009)
Am Stat
, vol.63
, pp. 308-319
-
-
Grömping, U.1
-
29
-
-
84871753828
-
Pathway hunting by random survival forests
-
Chen X, Ishwaran H. Pathway hunting by random survival forests. Bioinformatics 2013;29:99-105.
-
(2013)
Bioinformatics
, vol.29
, pp. 99-105
-
-
Chen, X.1
Ishwaran, H.2
-
30
-
-
63449100294
-
Capturing the spectrum of interaction effects in genetic association studies by simulated evaporative cooling network analysis
-
McKinney BA, Crowe JE Jr, Guo J, et al. Capturing the spectrum of interaction effects in genetic association studies by simulated evaporative cooling network analysis. PLoS Genet 2009;5:e1000432.
-
(2009)
PLoS Genet
, vol.5
, pp. e1000432
-
-
McKinney, B.A.1
Crowe Jr, J.E.2
Guo, J.3
-
31
-
-
84866761348
-
Application of random forests to association studies using mitochondrial single nucleotide polymorphisms
-
Kim Y, Kim H. Application of random forests to association studies using mitochondrial single nucleotide polymorphisms. Genom Inform 2007;5:168-73.
-
(2007)
Genom Inform
, vol.5
, pp. 168-173
-
-
Kim, Y.1
Kim, H.2
-
32
-
-
84856689961
-
Binding profiles of chromatin-modifying proteins are predictive for transcriptional activity and promoter-proximal pausing
-
Sakoparnig T, Kockmann T, Paro R, et al. Binding profiles of chromatin-modifying proteins are predictive for transcriptional activity and promoter-proximal pausing. JComputBiol 2012;19:126-38.
-
(2012)
JComputBiol
, vol.19
, pp. 126-138
-
-
Sakoparnig, T.1
Kockmann, T.2
Paro, R.3
|