"Turn off-on" phosphorescent biosensors for detection of DNA based on quantum dots/acridine orange

Analytical Biochemistry

Volumn 475, Issue , 2015, Pages 32-39

  Miao, Yanming ^a   Li, Yuting ^a   Zhang, Zhifeng ^a   Yan, Guiqin ^a   Bi, Yi ^b  

^a SHANXI NORMAL UNIVERSITY   (China)

^b YANTAI UNIVERSITY   (China)

Author keywords

Acridine orange; Biological fluids; DNA; Turn off on

Indexed keywords

BIOSENSORS; CITRUS FRUITS; DNA; GROUND STATE; II-VI SEMICONDUCTORS; MANGANESE COMPOUNDS; NANOCRYSTALS; PHOSPHORESCENCE; ZINC SULFIDE;

3-MERCAPTOPROPIONIC ACID; ACRIDINE ORANGE; BIOLOGICAL FLUIDS; DOUBLE HELIX STRUCTURE; ELECTROSTATIC ATTRACTIONS; PHOTO-INDUCED ELECTRON TRANSFER; ROOM TEMPERATURE PHOSPHORESCENCE; TURN OFFS;

SEMICONDUCTOR QUANTUM DOTS;

3 MERCAPTOPROPIONIC ACID; ACRIDINE ORANGE; DNA; MANGANESE; QUANTUM DOT; ZINC SULFIDE; FLUORESCENT DYE; MOLECULAR PROBE;

ARTICLE; AUTOFLUORESCENCE; BIOSENSOR; CHEMICAL BINDING; DNA BINDING; DNA DETERMINATION; ELECTRON TRANSPORT; LIGHT SCATTERING; LIMIT OF DETECTION; MALE; MOLECULAR DOCKING; MOLECULAR PROBE; NONHUMAN; PHOSPHORESCENCE; PRIORITY JOURNAL; ROOM TEMPERATURE; SALMON; SEMEN ANALYSIS; SIGNAL PROCESSING; SPERM; STATIC ELECTRICITY; SURFACE PROPERTY; CHEMISTRY; GENETIC PROCEDURES; PROCEDURES;

ACRIDINE ORANGE; BIOSENSING TECHNIQUES; DNA; FLUORESCENT DYES; MOLECULAR PROBES; QUANTUM DOTS;

EID: 84925124863     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2015.01.011     Document Type: Article

References (54)

1. L. Shang, L. Zhang, and S. Dong Turn-on fluorescent cyanide sensor based on copper ion-modified CdTe quantum dots Analyst 134 2009 107 113
2. J. Du, M. Liu, X. Lou, T. Zhao, Z. Wang, Y. Xue, J. Zhao, and Y. Xu Highly sensitive and selective chip-based fluorescent sensor for mercuric ion: development and comparison of turn-on and turn-off systems Anal. Chem. 84 2012 8060 8066
3. B.K. McMahon, and T. Gunnlaugsson Selective detection of the reduced form of glutathione (GSH) over the oxidized (GSSG) form using a combination of glutathione reductase and a Tb(III)-cyclen maleimide based lanthanide luminescent "switch on" assay J. Am. Chem. Soc. 134 2012 10725 10728
4. 2+ and its application in live cell imaging Sens. Actuator B 162 2012 313 320
5. J.L. Yao, X. Gao, W. Sun, X.Z. Fan, S. Shi, and T.M. Yao A naked-eye on-off-on molecular "light switch" based on a reversible "conformational switch" of G-quadruplex DNA Inorg. Chem. 51 2012 12591 12593
6. A.K. Ghosh, C. Ghosh, and A. Gupta A simple approach to detect caffeine in tea beverages J. Agric. Food Chem. 61 2013 3814 3820
7. 2+ based on single-stranded DNA functionalized Mn:CdS/ZnS quantum dots and gold nanoparticles by time-gated mode Anal. Chem. 85 2013 1164 1170
8. J. You, H. Hu, J. Zhou, L. Zhang, Y. Zhang, and T. Kondo Novel cellulose polyampholyte-gold nanoparticle-based colorimetric competition assay for the detection of cysteine and mercury(II) Langmuir 29 2013 5085 5092
9. R. Zhang, D. Zhao, H.G. Ding, Y.X. Huang, H.Z. Zhong, and H.Y. Xie Sensitive single-color fluorescence "off-on" switch system for dsDNA detection based on quantum dots-ruthenium assembling dyads Biosens. Bioelectron. 56 2014 51 57
10. D. Zhao, J. Li, T. Yang, and Z. He "Turn off-on" fluorescent sensor for platinum drugs-DNA interactions based on quantum dots Biosens. Bioelectron. 52 2014 29 35
11. J. Yuan, W. Guo, X. Yang, and E. Wang Anticancer drug-DNA interactions measured using a photoinduced electron-transfer mechanism based on luminescent quantum dots Anal. Chem. 81 2009 362 368
12. D. Zhao, W.H. Chan, Z. He, and T. Qiu Quantum dot-ruthenium Complex Dyads: Recognition of double-strand DNA through dual-color fluorescence detection Anal. Chem. 81 2009 3537 3543
13. T. Qiu, D. Zhao, G. Zhou, Y. Liang, Z. He, Z. Liu, X. Peng, and L. Zhou A positively charged QDs-based FRET probe for micrococcal nuclease detection Analyst 135 2010 2394 2399
14. L. Chen, X. Zhang, C. Zhang, G. Zhou, W. Zhang, D. Xiang, Z. He, and H. Wang Dual-color fluorescence and homogeneous immunoassay for the determination of human enterovirus 71 Anal. Chem. 83 2011 7316 7322
15. L. Chen, X. Zhang, G. Zhou, X. Xiang, X. Ji, Z. Zheng, Z. He, and H. Wang Simultaneous determination of human enterovirus 71 and coxsackievirus B3 by dual-color quantum dots and homogeneous immunoassay Anal. Chem. 84 2012 3200 3207
16. J.M. Costa-Fernández, R. Pereiro, and A. Sanz-Medel The use of luminescent quantum dots for optical sensing Trends Anal. Chem. 25 2006 207 218
17. J.M. Traviesa-Alvarez, I. Sánchez-Barragán, J.M. Costa-Fernández, R. Pereiro, and A. Sanz-Medel Room temperature phosphorescence optosensing of benzo[a]pyrene in water using halogenated molecularly imprinted polymers Analyst 132 2007 218 223
18. Y. He, H.F. Wang, and X.P. Yan Exploring Mn-doped ZnS quantum dots for the room-temperature phosphorescence detection of enoxacin in biological fluids Anal. Chem. 80 2008 3832 3837
19. Y. He, H.F. Wang, and X.P. Yan Self-assembly of Mn-doped ZnS quantum dots/octa(3-aminopropyl) octasilsequioxane octahydrochloride nanohybrids for optosensing DNA Chemistry 15 2009 5436 5440
20. P. Wu, Y. He, H.F. Wang, and X.P. Yan Conjugation of glucose oxidase onto Mn-doped ZnS quantum dots for phosphorescent sensing of glucose in biological fluids Anal. Chem. 82 2010 1427 1433
21. W.-S. Zou, D. Sheng, X. Ge, J.Q. Qiao, and H.Z. Lian Room-temperature phosphorescence chemosensor and Rayleigh scattering chemodosimeter dual-recognition probe for 2,4,6-trinitrotoluene based on manganese-doped ZnS quantum dots Anal. Chem. 83 2010 30 37
22. P. Wu, L.N. Miao, H.F. Wang, X.G. Shao, and X.P. Yan A multidimensional sensing device for the discrimination of proteins based on manganese-doped ZnS quantum dots Angew. Chem. Int. Ed. 50 2011 8118 8121
23. C.X. Yang, and X.P. Yan Metal-organic framework MIL-101 (Cr) for high-performance liquid chromatographic separation of substituted aromatics Anal. Chem. 83 2011 7144 7150
24. 2+-adenosine triphosphate-arginine ternary system Talanta 97 2012 16 22
25. E. Sotelo-Gonzalez, M.T. Fernandez-Argüelles, J.M. Costa-Fernandez, and A. Sanz-Medel Mn-doped ZnS quantum dots for the determination of acetone by phosphorescence attenuation Anal. Chim. Acta 712 2012 120 126
26. H.F. Wang, Y.Y. Wu, and X.P. Yan Room-temperature phosphorescent discrimination of catechol from resorcinol and hydroquinone based on sodium tripolyphosphate capped Mn-doped ZnS quantum dots Anal. Chem. 85 2013 1920 1925
27. Y. Miao, Z. Zhang, Y. Gong, Q. Zhang, and G. Yan Self-assembly of manganese doped zinc sulfide quantum dots/CTAB nanohybrids for detection of rutin Biosens. Bioelectron. 52 2014 271 276
28. E.B. Brauns, C.J. Murphy, and M.A. Berg Local dynamics in DNA by temperature-dependent Stokes shifts of an intercalated dye J. Am. Chem. Soc. 120 1998 2449 2456
29. S. Clerc, and Y. Barenholz A quantitative model for using acridine orange as a transmembrane pH gradient probe Anal. Biochem. 259 1998 104 111
30. A.I. Kononov, E.B. Moroshkina, N.V. Tkachenko, and H. Lemmetyinen Photophysical processes in the complexes of DNA with ethidium bromide and acridine orange: a femtosecond study J. Phys. Chem. B 105 2001 535 541
31. M.B. Lyles, and I.L. Cameron Interactions of the DNA intercalator acridine orange, with itself, with caffeine, and with double stranded DNA Biophys. Chem. 96 2002 53 76
32. S.A. Krolenko, S.Y. Adamyan, T.N. Belyaeva, and T.P. Mozhenok Acridine orange accumulation in acid organelles of normal and vacuolated frog skeletal muscle fibres Cell Biol. Int. 30 2006 933 939
33. S. Udenfriend, and P. Zaltzman Fluorescence characteristics of purines, pyrimidines, and their derivatives: measurement of guanine in nucleic acid hydrolyzates Anal. Biochem. 3 1962 49 59
34. J.B. Le Pecq, and C. Paoletti A new fluorometric method for RNA and DNA determination Anal. Biochem. 17 1966 100 107
35. 3+-tetracycline complex Anal. Chem. 67 1995 1785 1788
36. 3+ complex as an environmentally friendly fluorescence probe for DNA and its application Talanta 71 2007 816 821
37. 3+-benzoylacetone-cetyltrimethylammonium bromide-nucleic acid system J. Fluoresc. 15 2005 655 660
38. Y. Guan, W. Zhou, X. Yao, M. Zhao, and Y. Li Determination of nucleic acids based on the fluorescence quenching of Hoechst 33258 at pH 4.5 Anal. Chim. Acta 570 2006 21 28
39. C.Q. Zhu, S.J. Zhuo, H. Zheng, J.L. Chen, D.H. Li, S.H. Li, and J.G. Xu Fluorescence enhancement method for the determination of nucleic acids using cationic cyanine as a fluorescence probe Analyst 129 2004 254 258
40. L. Zhao, X. Wu, H. Ding, and J. Yang Fluorescence enhancement effect of morin-nucleic acid-l-cysteine-capped nano-ZnS system and the determination of nucleic acid Analyst 133 2008 896 902
41. Y. Zhou, G. Bian, L. Wang, L. Dong, L. Wang, and J. Kan Sensitive determination of nucleic acids using organic nanoparticle fluorescence probes Spectrochim. Acta A 61 2005 1841 1845
42. L.Y. Wang, L. Wang, F. Gao, Z.Y. Yu, and Z.M. Wu Application of functionalized CdS nanoparticles as fluorescence probe in the determination of nucleic acids Analyst 127 2002 977 980
43. 2+ nanocrystals by using mercaptopropionic acid as stabilizer J. Mater. Chem. 13 2003 1853 1857
44. R. Thakar, Y. Chen, and P.T. Snee Efficient emission from core/(doped) shell nanoparticles: applications for chemical sensing Nano Lett. 7 2007 3429 3432
45. 2+ impurity luminescence in ZnS nanoparticles J. Phys. Chem. B 105 2001 4128 4132
46. C.Z. Huang, Y.F. Li, and X.D. Liu Determination of nucleic acids at nanogram levels with safranine T by a resonance light-scattering technique Anal. Chim. Acta 375 1998 89 97
47. C.Z. Huang, K.A. Li, and S.Y. Tong Spectrophotometry of nucleic acids by their effect on the complex of cobalt(II) with 4-[(5-chloro-2-pyridyl)azo]-1,3-diaminobenzene Anal. Chim. Acta 345 1997 235 242
48. Y. Li, J. Chen, C. Zhu, L. Wang, D. Zhao, S. Zhuo, and Y. Wu Preparation and application of cysteine-capped ZnS nanoparticles as fluorescence probe in the determination of nucleic acids Spectrochim. Acta A 60 2004 1719 1724
49. T. Thomas, and V.A. Bloomfield Toroidal condensation of Z-DNA and identification of an intermediate in the B to Z transition of poly(dG-m5dC)-poly(dG-m5dC) Biochemistry 24 1985 713 719
50. T. Thomas, and R.P. Messner Structural specificity of polyamines in left-handed Z-DNA formation: immunological and spectroscopic studies J. Mol. Biol. 201 1988 463 467
51. T. Thomas, M.J. Baarsch, and R.P. Messner Immunological detection of B-DNA to Z-DNA transition of polynucleotides by immobilization of the DNA conformation on a solid support Anal. Biochem. 168 1988 358 366
52. A. Petrov, D. Khalil, R. Kazaryan, I. Savintsev, and B. Sukhorukov Structural and thermodynamic features of complexes formed by DNA and synthetic polynucleotides with dodecylamine and dodecyltrimethylammonium bromide Bioelectrochemistry 58 2002 75 85
53. Y.L. Zhou, and Y.Z. Li The interaction of poly(ethylenimine) with nucleic acids and its use in determination of nucleic acids based on light scattering Spectrochim. Acta A 60 2004 377 384
54. G.J. Quigley, A.H. Wang, G. Ughetto, G. Van Der Marel, J.H. Van Boom, and A. Rich Molecular structure of an anticancer drug-DNA complex: daunomycin plus d(CpGpTpApCpG) Proc. Natl. Acad. Sci. U.S.A. 77 1980 7204 7208