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Volumn 95, Issue 6, 2015, Pages 1243-1251

Characterization of Phytophthora nicotianae isolates in southeast Spain and their detection and quantification through a real-time TaqMan PCR

Author keywords

Genetic diversity; Mitochondrial DNA; Phytophthora nicotianae; TaqMan real time PCR; Tristeza disease

Indexed keywords

PHYTOPHTHORA; PHYTOPHTHORA CAPSICI; PHYTOPHTHORA NICOTIANAE;

EID: 84924919235     PISSN: 00225142     EISSN: 10970010     Source Type: Journal    
DOI: 10.1002/jsfa.6813     Document Type: Article
Times cited : (24)

References (39)
  • 1
    • 0013116511 scopus 로고    scopus 로고
    • Phytophthora capsici
    • in, ed. by Erwin DC and Ribeiro OK. APS Press, St Paul, MN
    • Erwin DC and Ribeiro OK, Phytophthora capsici, in Phytophthora Diseases Worldwide, ed. by Erwin DC and Ribeiro OK. APS Press, St Paul, MN, pp. 262-268 (1996).
    • (1996) Phytophthora Diseases Worldwide , pp. 262-268
    • Erwin, D.C.1    Ribeiro, O.K.2
  • 3
    • 0028981584 scopus 로고
    • Phytophthora nicotianae var parasítica pathogène du piment en Tunisie
    • Allagui MB, Tello M and Mlaiki A, Phytophthora nicotianae var parasítica pathogène du piment en Tunisie. Agronomie 15:171-179 (1995).
    • (1995) Agronomie , vol.15 , pp. 171-179
    • Allagui, M.B.1    Tello, M.2    Mlaiki, A.3
  • 4
    • 0141890989 scopus 로고    scopus 로고
    • Phytophthora nicotianae pathogenic to pepper in northwest Spain
    • Andrés JL, Rivera A and Fernández J, Phytophthora nicotianae pathogenic to pepper in northwest Spain. J Plant Pathol 85:91-98 (2003).
    • (2003) J Plant Pathol , vol.85 , pp. 91-98
    • Andrés, J.L.1    Rivera, A.2    Fernández, J.3
  • 6
    • 34347337598 scopus 로고    scopus 로고
    • Are the polygenic architectures of resistance to Phytophthora capsici and P. parasitica independent in pepper?
    • Bonnet J, Danan S, Boudet C, Barchi L, Sage-Palloix AM, Caromel B et al., Are the polygenic architectures of resistance to Phytophthora capsici and P. parasitica independent in pepper? Theor Appl Genet 115:253-264 (2007).
    • (2007) Theor Appl Genet , vol.115 , pp. 253-264
    • Bonnet, J.1    Danan, S.2    Boudet, C.3    Barchi, L.4    Sage-Palloix, A.M.5    Caromel, B.6
  • 7
    • 80052705926 scopus 로고    scopus 로고
    • A multiplex PCR for the detection of Phytophthora nicotianae and P. cactorum and a survey of their occurrence in strawberry production areas of Japan
    • Li M, Asano T, Suga H and Kageyama K, A multiplex PCR for the detection of Phytophthora nicotianae and P. cactorum and a survey of their occurrence in strawberry production areas of Japan. Plant Dis 95:1270-1278 (2011).
    • (2011) Plant Dis , vol.95 , pp. 1270-1278
    • Li, M.1    Asano, T.2    Suga, H.3    Kageyama, K.4
  • 8
    • 0029188433 scopus 로고
    • Creation of species hybrids of Phytophthora with modified host ranges by zoospores fusion
    • Ersek T, English JT and Schoelz JE, Creation of species hybrids of Phytophthora with modified host ranges by zoospores fusion. Phytopathology 85:1343-1347 (1995).
    • (1995) Phytopathology , vol.85 , pp. 1343-1347
    • Ersek, T.1    English, J.T.2    Schoelz, J.E.3
  • 9
    • 73749084191 scopus 로고    scopus 로고
    • Quantification of the biocontrol agent Trichoderma harzianum with real-time TaqMan PCR and its potential extrapolation to the hyphal biomass
    • López-Mondéjar R, Antón A, Raidl S, Ros M and Pascual JA, Quantification of the biocontrol agent Trichoderma harzianum with real-time TaqMan PCR and its potential extrapolation to the hyphal biomass. Bioresour Technol 101:2888-2891 (2010).
    • (2010) Bioresour Technol , vol.101 , pp. 2888-2891
    • López-Mondéjar, R.1    Antón, A.2    Raidl, S.3    Ros, M.4    Pascual, J.A.5
  • 10
    • 84878497422 scopus 로고    scopus 로고
    • Simultaneous detection and quantification of Phytophthora nicotianae and P. cactorum, and distribution analyses in strawberry greenhouses by duplex real-time PCR
    • Li M, Inada M, Watanabe H, Suga H and Kageyama K, Simultaneous detection and quantification of Phytophthora nicotianae and P. cactorum, and distribution analyses in strawberry greenhouses by duplex real-time PCR. Microbes Environ 28:195-203 (2013).
    • (2013) Microbes Environ , vol.28 , pp. 195-203
    • Li, M.1    Inada, M.2    Watanabe, H.3    Suga, H.4    Kageyama, K.5
  • 11
    • 0042360459 scopus 로고    scopus 로고
    • Etiology of Phytophthora drechsleri and P. nicotianae (=P. parasitica) diseases affecting floriculture crops
    • Lamour KH, Daughtrey ML, Benson DM, Huan J and Hausbeck MK, Etiology of Phytophthora drechsleri and P. nicotianae (=P. parasitica) diseases affecting floriculture crops. Plant Dis 87:854-858 (2003).
    • (2003) Plant Dis , vol.87 , pp. 854-858
    • Lamour, K.H.1    Daughtrey, M.L.2    Benson, D.M.3    Huan, J.4    Hausbeck, M.K.5
  • 12
    • 79955130767 scopus 로고    scopus 로고
    • Genetic characterization of Phytophthora nicotianae by the analysis of polymorphic regions of the mitochondrial DNA
    • Mammella MA, Cacciola SO, Martin F and Schena L, Genetic characterization of Phytophthora nicotianae by the analysis of polymorphic regions of the mitochondrial DNA. Fungal Biol 115:432-442 (2011).
    • (2011) Fungal Biol , vol.115 , pp. 432-442
    • Mammella, M.A.1    Cacciola, S.O.2    Martin, F.3    Schena, L.4
  • 13
    • 10244255113 scopus 로고    scopus 로고
    • Genetic and pathogenic variation among tobacco blank shank strains of Phytophthora parasitica var. nicotianae from the main tobacco growing in China
    • Zhang XG, Sun WX, Guo L. Fu JF and Chang CJ, Genetic and pathogenic variation among tobacco blank shank strains of Phytophthora parasitica var. nicotianae from the main tobacco growing in China. J Phytopathol 151:259-266 (2003).
    • (2003) J Phytopathol , vol.151 , pp. 259-266
    • Zhang, X.G.1    Sun, W.X.2    Guo, L.3    Fu, J.F.4    Chang, C.J.5
  • 14
    • 35348873136 scopus 로고    scopus 로고
    • A quantitative trait locus influencing tolerance to Phytophthora root rot in the soybean cultivar 'Conrad'
    • Weng C, Yu K, Anderson T and Poysa V, A quantitative trait locus influencing tolerance to Phytophthora root rot in the soybean cultivar 'Conrad'. Euphytica 158:81-86 (2007).
    • (2007) Euphytica , vol.158 , pp. 81-86
    • Weng, C.1    Yu, K.2    Anderson, T.3    Poysa, V.4
  • 15
    • 33748058473 scopus 로고    scopus 로고
    • Assessing the potential of regions of the nuclear and mitochondrial genome to develop a 'molecular tool box' for the detection and characterization of Phytophthora species
    • Schena L and Cooke DEL, Assessing the potential of regions of the nuclear and mitochondrial genome to develop a 'molecular tool box' for the detection and characterization of Phytophthora species. J Microbiol Methods 67:70-85 (2006).
    • (2006) J Microbiol Methods , vol.67 , pp. 70-85
    • Schena, L.1    Cooke, D.E.L.2
  • 16
    • 33847647990 scopus 로고    scopus 로고
    • An Andean origin of Phytophthora infestans inferred from mitochondrial and nuclear gene genealogies
    • Gómez-Alpizar L, Carbone I and Ristaino JB, An Andean origin of Phytophthora infestans inferred from mitochondrial and nuclear gene genealogies. P Natl Acad Sci USA 104:3306-3311 (2007).
    • (2007) P Natl Acad Sci USA , vol.104 , pp. 3306-3311
    • Gómez-Alpizar, L.1    Carbone, I.2    Ristaino, J.B.3
  • 17
    • 47249144256 scopus 로고    scopus 로고
    • Mitochondrial haplotype determination in the oomycete plant pathogen Phytophthora ramorum
    • Martin FN, Mitochondrial haplotype determination in the oomycete plant pathogen Phytophthora ramorum. Curr Genet 54:23-34 (2008).
    • (2008) Curr Genet , vol.54 , pp. 23-34
    • Martin, F.N.1
  • 18
    • 27644551948 scopus 로고    scopus 로고
    • Sequential gene deletions in Hypocrea jecorina using a single blaster cassette
    • Hartl L and Seiboth B, Sequential gene deletions in Hypocrea jecorina using a single blaster cassette. Curr Genet 48:204-211 (2005).
    • (2005) Curr Genet , vol.48 , pp. 204-211
    • Hartl, L.1    Seiboth, B.2
  • 19
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle JJ and Doyle JL, A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11-15 (1987).
    • (1987) Phytochem Bull , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 20
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M and Kumar S, MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739 (2011).
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 21
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • 354-267
    • Huson DH and Bryant D, Application of phylogenetic networks in evolutionary studies. Mol Biol Evol 23:354-267 (2006).
    • (2006) Mol Biol Evol , vol.23
    • Huson, D.H.1    Bryant, D.2
  • 22
    • 0034764566 scopus 로고    scopus 로고
    • RAPD PCR for diagnosis of Phytophthora parasitica var. nicotianae isolates which cause black shank on tobacco
    • Zhang XG, Zheng GS, Han HY, Shi CK and Chang CJ, RAPD PCR for diagnosis of Phytophthora parasitica var. nicotianae isolates which cause black shank on tobacco. J Phytopathol 149:569-574 (2001).
    • (2001) J Phytopathol , vol.149 , pp. 569-574
    • Zhang, X.G.1    Zheng, G.S.2    Han, H.Y.3    Shi, C.K.4    Chang, C.J.5
  • 23
    • 0036867254 scopus 로고    scopus 로고
    • Detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soil by nested PCR
    • Ippolito A, Schena L and Nigro F, Detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soil by nested PCR. Eur J Plant Pathol 108:855-868 (2002).
    • (2002) Eur J Plant Pathol , vol.108 , pp. 855-868
    • Ippolito, A.1    Schena, L.2    Nigro, F.3
  • 24
    • 8744297171 scopus 로고    scopus 로고
    • Real-time detection of Phytophthora nicotianae and P. citropthora in citrus roots and soil
    • Ippolito A, Schena L, Nigro F, Ligorio VS and Yaseen T, Real-time detection of Phytophthora nicotianae and P. citropthora in citrus roots and soil. Eur J Plant Pathol 110:833-843 (2004).
    • (2004) Eur J Plant Pathol , vol.110 , pp. 833-843
    • Ippolito, A.1    Schena, L.2    Nigro, F.3    Ligorio, V.S.4    Yaseen, T.5
  • 25
    • 0036093326 scopus 로고    scopus 로고
    • Specific and sensitive detection of Phytophthora nicotianae by simple and nested PCR
    • Grote D, Olmos A, Kofoet A, Tuset JJ, Bertolini E and Cambra M, Specific and sensitive detection of Phytophthora nicotianae by simple and nested PCR. Eur Plant Pathol 108:197-207 (2002).
    • (2002) Eur Plant Pathol , vol.108 , pp. 197-207
    • Grote, D.1    Olmos, A.2    Kofoet, A.3    Tuset, J.J.4    Bertolini, E.5    Cambra, M.6
  • 28
    • 72449178367 scopus 로고    scopus 로고
    • Rapid detection of Phytophthora nicotianae in infected tobacco tissues and soil samples based on its Ypt1 gene
    • Meng J and Wang Y, Rapid detection of Phytophthora nicotianae in infected tobacco tissues and soil samples based on its Ypt1 gene. J Phytopathol 158:1-7 (2010).
    • (2010) J Phytopathol , vol.158 , pp. 1-7
    • Meng, J.1    Wang, Y.2
  • 29
    • 72449148182 scopus 로고    scopus 로고
    • Detection of Phytophthora nicotianae in soil with real-time quantitative PCR
    • Huang J, Wu J, Li C, Xiao C and Wang G, Detection of Phytophthora nicotianae in soil with real-time quantitative PCR. J Phytopathol 158:15-21 (2010).
    • (2010) J Phytopathol , vol.158 , pp. 15-21
    • Huang, J.1    Wu, J.2    Li, C.3    Xiao, C.4    Wang, G.5
  • 30
    • 0031665494 scopus 로고    scopus 로고
    • Recombination pathways in Phytophthora infestans: polyploidy resulting from aberrant sexual development and zoospore-mediated heterokaryosis
    • Judelson HS and Yang G, Recombination pathways in Phytophthora infestans: polyploidy resulting from aberrant sexual development and zoospore-mediated heterokaryosis. Mycol Res 102:1245-1253 (1998).
    • (1998) Mycol Res , vol.102 , pp. 1245-1253
    • Judelson, H.S.1    Yang, G.2
  • 31
    • 0034954108 scopus 로고    scopus 로고
    • Soil fungi: diversity and detection
    • Bridge P and Spooner B, Soil fungi: diversity and detection. Plant Soil 232:147-154 (2001).
    • (2001) Plant Soil , vol.232 , pp. 147-154
    • Bridge, P.1    Spooner, B.2
  • 32
    • 0034792236 scopus 로고    scopus 로고
    • Investigating the spatiotemporal genetic structure of Phytophthora capsici in Michigan
    • Lamour KD and Hauseck MK, Investigating the spatiotemporal genetic structure of Phytophthora capsici in Michigan. Phytopathology 91:973-980 (2001).
    • (2001) Phytopathology , vol.91 , pp. 973-980
    • Lamour, K.D.1    Hauseck, M.K.2
  • 33
    • 84856681195 scopus 로고    scopus 로고
    • Mitochondrial haplotype analysis for differentiation of isolates of Phytophthora cinnamomi
    • Martin FN and Coffey MD, Mitochondrial haplotype analysis for differentiation of isolates of Phytophthora cinnamomi. Phytopathology 102:229-239 (2012).
    • (2012) Phytopathology , vol.102 , pp. 229-239
    • Martin, F.N.1    Coffey, M.D.2
  • 35
    • 0026542473 scopus 로고
    • Slippage synthesis of simple sequence of DNA
    • Shlötterer C and Tautz D, Slippage synthesis of simple sequence of DNA. Nucleic Acids Res 20:211-215 (1992).
    • (1992) Nucleic Acids Res , vol.20 , pp. 211-215
    • Shlötterer, C.1    Tautz, D.2
  • 36
    • 23944445380 scopus 로고    scopus 로고
    • Development of specific PCR primers for identification and detection of Phytophthora capsici Leon
    • Silvar C, Duncan JM, Cooke DEL, Williams NA, Díaz J and Merino F, Development of specific PCR primers for identification and detection of Phytophthora capsici Leon. Eur J Plant Pathol 112:43-52 (2005).
    • (2005) Eur J Plant Pathol , vol.112 , pp. 43-52
    • Silvar, C.1    Duncan, J.M.2    Cooke, D.E.L.3    Williams, N.A.4    Díaz, J.5    Merino, F.6
  • 37
    • 0033510967 scopus 로고    scopus 로고
    • Phenotypic and molecular characterization of species hybrids derived from induced fusion of zoospores of Phytophthora capsici and Phythophthora nicotianae
    • English JT, Laday M, Bakony J, Schoelz JE and Ersek T, Phenotypic and molecular characterization of species hybrids derived from induced fusion of zoospores of Phytophthora capsici and Phythophthora nicotianae. Mycol Res 103:1003-1008 (1999).
    • (1999) Mycol Res , vol.103 , pp. 1003-1008
    • English, J.T.1    Laday, M.2    Bakony, J.3    Schoelz, J.E.4    Ersek, T.5
  • 38
    • 0000432452 scopus 로고
    • Amplifications and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • in, ed. by Innis MA, Gelfand DH, Sninsky JJ and White TJ. Academic Press, San Diego, CA
    • White TJ, Bruns T, Lee S and Taylor J, Amplifications and direct sequencing of fungal ribosomal RNA genes for phylogenetics, in PCR Protocols: A Guide to Methods and Applications, ed. by Innis MA, Gelfand DH, Sninsky JJ and White TJ. Academic Press, San Diego, CA, pp. 315-322 (1990).
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 39
    • 28044440886 scopus 로고    scopus 로고
    • Real-time polymerase chain reaction quantification of Phytophthora capsici in different pepper genotypes
    • Silvar C, Díaz J and Merino F, Real-time polymerase chain reaction quantification of Phytophthora capsici in different pepper genotypes. Phytopathology 95:1423-1429 (2005).
    • (2005) Phytopathology , vol.95 , pp. 1423-1429
    • Silvar, C.1    Díaz, J.2    Merino, F.3


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