메뉴 건너뛰기




Volumn 133, Issue 1, 2015, Pages 73-82

Side-chain interactions in the regulatory domain of human glutamate dehydrogenase determine basal activity and regulation

Author keywords

allosteric regulation; circular dichroism; glutamate dehydrogenase; molecular dynamics simulation; molecular modeling; site directed mutagenesis

Indexed keywords

ARGININE; GLUTAMATE DEHYDROGENASE; GLUTAMIC ACID; MUTANT PROTEIN; RECOMBINANT PROTEIN; SERINE; GLUD1 PROTEIN, HUMAN; ISOENZYME;

EID: 84924599163     PISSN: 00223042     EISSN: 14714159     Source Type: Journal    
DOI: 10.1111/jnc.13019     Document Type: Article
Times cited : (9)

References (22)
  • 1
    • 84905024104 scopus 로고    scopus 로고
    • Structural plasticity of 4-α-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein
    • Amprazi M., Kotsifaki D., Providaki M., Kapetaniou E. G., Fellas G., Kyriazidis I., Perez J., and, Kokkinidis M., (2014) Structural plasticity of 4-α-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein. PNAS 111, 11049-11054.
    • (2014) PNAS , vol.111 , pp. 11049-11054
    • Amprazi, M.1    Kotsifaki, D.2    Providaki, M.3    Kapetaniou, E.G.4    Fellas, G.5    Kyriazidis, I.6    Perez, J.7    Kokkinidis, M.8
  • 2
    • 0023572285 scopus 로고
    • Glial glutamate dehydrogenase: Ultrastructural localization and regional distribution in relation to the mitochondrial enzyme, cytochrome oxidase
    • Aoki C., Milner T. A., Berger S. B., Sheu K. F., Blass J. P., and, Pickel V. M., (1987) Glial glutamate dehydrogenase: ultrastructural localization and regional distribution in relation to the mitochondrial enzyme, cytochrome oxidase. J. Neurosci. Res. 18, 305-318.
    • (1987) J. Neurosci. Res. , vol.18 , pp. 305-318
    • Aoki, C.1    Milner, T.A.2    Berger, S.B.3    Sheu, K.F.4    Blass, J.P.5    Pickel, V.M.6
  • 4
    • 0344837307 scopus 로고    scopus 로고
    • Structural studies on ADP activation of mammalian glutamate dehydrogenase and the evolution of regulation
    • Banerjee S., Schmidt T., Fang J., Stanley C. A., and, Smith T. J., (2003) Structural studies on ADP activation of mammalian glutamate dehydrogenase and the evolution of regulation. Biochemistry 42, 3446-3456.
    • (2003) Biochemistry , vol.42 , pp. 3446-3456
    • Banerjee, S.1    Schmidt, T.2    Fang, J.3    Stanley, C.A.4    Smith, T.J.5
  • 5
    • 67650500988 scopus 로고    scopus 로고
    • CHARMM: The biomolecular simulation program
    • Brooks B. R., Brooks C. L., 3rd, Mackerell A. D., Jr, et al,. (2009) CHARMM: the biomolecular simulation program. J. Comput. Chem. 30, 1545-1614.
    • (2009) J. Comput. Chem. , vol.30 , pp. 1545-1614
    • Brooks, B.R.1    Brooks, C.L.2    Mackerell, Jr.A.D.3
  • 6
    • 6944242766 scopus 로고    scopus 로고
    • Birth and adaptive evolution of a hominoid gene that supports high neurotransmitter flux
    • Burki F., and, Kaessmann H., (2004) Birth and adaptive evolution of a hominoid gene that supports high neurotransmitter flux. Nat. Genet. 36, 1061-1063.
    • (2004) Nat. Genet. , vol.36 , pp. 1061-1063
    • Burki, F.1    Kaessmann, H.2
  • 8
    • 0036534464 scopus 로고    scopus 로고
    • Expression, purification and characterization of human glutamate dehydrogenase (GDH) allosteric regulatory mutations
    • Fang J., Hsu B., MacMullen C., Poncz M., Smith T., and, Stanley C., (2002) Expression, purification and characterization of human glutamate dehydrogenase (GDH) allosteric regulatory mutations. Biochem. J. 363, 81-87.
    • (2002) Biochem. J. , vol.363 , pp. 81-87
    • Fang, J.1    Hsu, B.2    Macmullen, C.3    Poncz, M.4    Smith, T.5    Stanley, C.6
  • 9
    • 0028854685 scopus 로고
    • The use of spectral decomposition via the convex constraint algorithm in interpreting the CD-observed unfolding transitions of coiled coils
    • Holtzer M. E., and, Holtzer A., (1995) The use of spectral decomposition via the convex constraint algorithm in interpreting the CD-observed unfolding transitions of coiled coils. Biopolymers 36, 365-379.
    • (1995) Biopolymers , vol.36 , pp. 365-379
    • Holtzer, M.E.1    Holtzer, A.2
  • 10
    • 0242322528 scopus 로고    scopus 로고
    • An implicit membrane generalized born theory for the study of structure, stability, and interactions of membrane proteins
    • Im W., Feig M., and, Brooks C. L., (2003a) An implicit membrane generalized born theory for the study of structure, stability, and interactions of membrane proteins. Biophys. J. 85, 2900-2918.
    • (2003) Biophys. J. , vol.85 , pp. 2900-2918
    • Im, W.1    Feig, M.2    Brooks, C.L.3
  • 11
    • 0141956090 scopus 로고    scopus 로고
    • Generalized born model with a simple smoothing function
    • Im W., Lee M. S., and, Brooks C. L., (2003b) Generalized born model with a simple smoothing function. J. Comp. Chem. 24, 1691-1702.
    • (2003) J. Comp. Chem. , vol.24 , pp. 1691-1702
    • Im, W.1    Lee, M.S.2    Brooks, C.L.3
  • 12
    • 35848964803 scopus 로고    scopus 로고
    • Properties and molecular evolution of human GLUD2 (neural and testicular tissue-specific) glutamate dehydrogenase
    • Kanavouras K., Mastorodemos V., Borompokas N., Spanaki C., and, Plaitakis A., (2007) Properties and molecular evolution of human GLUD2 (neural and testicular tissue-specific) glutamate dehydrogenase. J. Neurosci. Res. 85, 3398-3406.
    • (2007) J. Neurosci. Res. , vol.85 , pp. 3398-3406
    • Kanavouras, K.1    Mastorodemos, V.2    Borompokas, N.3    Spanaki, C.4    Plaitakis, A.5
  • 13
    • 0030061356 scopus 로고    scopus 로고
    • Exogenous concentration regulates the metabolic fate of glutamate in astrocytes
    • McKenna M. C., Sonnewald U., Huang X., Stevenson J., and, Zielke H. R., (1996) Exogenous concentration regulates the metabolic fate of glutamate in astrocytes. J. Neurochem. 66, 386-393.
    • (1996) J. Neurochem. , vol.66 , pp. 386-393
    • McKenna, M.C.1    Sonnewald, U.2    Huang, X.3    Stevenson, J.4    Zielke, H.R.5
  • 14
    • 77149147406 scopus 로고    scopus 로고
    • Gain-of-function variant in GLUD2 glutamate dehydrogenase modifies Parkinson's disease onset
    • Plaitakis A., Latsoudis H., Kanavouras K., et al,. (2010) Gain-of-function variant in GLUD2 glutamate dehydrogenase modifies Parkinson's disease onset. Eur. J. Hum. Genet. 18, 336-341.
    • (2010) Eur. J. Hum. Genet. , vol.18 , pp. 336-341
    • Plaitakis, A.1    Latsoudis, H.2    Kanavouras, K.3
  • 15
    • 80052265272 scopus 로고    scopus 로고
    • The human GLUD2 glutamate dehydrogenase and its regulation in health and disease
    • Plaitakis A., Latsoudis H., and, Spanaki C., (2011) The human GLUD2 glutamate dehydrogenase and its regulation in health and disease. Neurochem. Int. 59, 495-509.
    • (2011) Neurochem. Int. , vol.59 , pp. 495-509
    • Plaitakis, A.1    Latsoudis, H.2    Spanaki, C.3
  • 16
    • 0025696513 scopus 로고
    • Immunohistochemical demonstration of glutamate dehydrogenase in the postnatally developing rat hippocampal formation and cerebellar cortex: Comparison to activity staining
    • Rothe F., Wolf G., and, Schunzel G., (1990) Immunohistochemical demonstration of glutamate dehydrogenase in the postnatally developing rat hippocampal formation and cerebellar cortex: comparison to activity staining. Neuroscience 39, 419-429.
    • (1990) Neuroscience , vol.39 , pp. 419-429
    • Rothe, F.1    Wolf, G.2    Schunzel, G.3
  • 17
    • 0028831507 scopus 로고
    • Quantitative ultrastructural localization of glutamate dehydrogenase in the rat cerebellar cortex
    • Rothe F., Brosz M., and, Storm-Mathisen J., (1995) Quantitative ultrastructural localization of glutamate dehydrogenase in the rat cerebellar cortex. Neuroscience 64, 3-17.
    • (1995) Neuroscience , vol.64 , pp. 3-17
    • Rothe, F.1    Brosz, M.2    Storm-Mathisen, J.3
  • 18
    • 0028341884 scopus 로고
    • Novel human glutamate dehydrogenase expressed in neural and testicular tissues and encoded by an X-linked intronless gene
    • Shashidharan P., Michaelides T. M., Robakis N. K., Kretsovali A., Papamatheakis J., and, Plaitakis A., (1994) Novel human glutamate dehydrogenase expressed in neural and testicular tissues and encoded by an X-linked intronless gene. J. Biol. Chem. 269, 16971-16976.
    • (1994) J. Biol. Chem. , vol.269 , pp. 16971-16976
    • Shashidharan, P.1    Michaelides, T.M.2    Robakis, N.K.3    Kretsovali, A.4    Papamatheakis, J.5    Plaitakis, A.6
  • 19
    • 0036304611 scopus 로고    scopus 로고
    • The structure of apo human glutamate dehydrogenase details subunit communication and allostery
    • Smith T., Schmidt T., Fang J., Wu J., Siuzdak G., and, Stanley C., (2002) The structure of apo human glutamate dehydrogenase details subunit communication and allostery. J. Mol. Biol. 318, 765-777.
    • (2002) J. Mol. Biol. , vol.318 , pp. 765-777
    • Smith, T.1    Schmidt, T.2    Fang, J.3    Wu, J.4    Siuzdak, G.5    Stanley, C.6
  • 20
    • 0141861067 scopus 로고    scopus 로고
    • Protein folding revisited. A polypeptide chain at the folding-misfolding-nonfolding cross-roads: Which way to go?
    • Uversky V. N., (2003) Protein folding revisited. A polypeptide chain at the folding-misfolding-nonfolding cross-roads: which way to go? Cell. Mol. Life Sci. 60, 1852-1871.
    • (2003) Cell. Mol. Life Sci. , vol.60 , pp. 1852-1871
    • Uversky, V.N.1
  • 21
    • 0037135619 scopus 로고    scopus 로고
    • Single amino acid substitution (G456A) in the vicinity of the GTP binding domain of human housekeeping glutamate dehydrogenase markedly attenuates GTP inhibition and abolishes the cooperative behavior of the enzyme
    • Zaganas I., and, Plaitakis A., (2002) Single amino acid substitution (G456A) in the vicinity of the GTP binding domain of human housekeeping glutamate dehydrogenase markedly attenuates GTP inhibition and abolishes the cooperative behavior of the enzyme. J. Biol. Chem. 277, 26422-26428.
    • (2002) J. Biol. Chem. , vol.277 , pp. 26422-26428
    • Zaganas, I.1    Plaitakis, A.2
  • 22
    • 0037195942 scopus 로고    scopus 로고
    • Substitution of ser for Arg443 in the regulatory domain of human housekeeping (GLUD1) glutamate dehydrogenase virtually abolishes basal activity and markedly alters the activation of the enzyme by ADP and L-leucine
    • Zaganas I., Spanaki C., Karpusas M., and, Plaitakis A., (2002) Substitution of Ser for Arg443 in the regulatory domain of human housekeeping (GLUD1) glutamate dehydrogenase virtually abolishes basal activity and markedly alters the activation of the enzyme by ADP and L-leucine. J. Biol. Chem. 277, 46552-46558.
    • (2002) J. Biol. Chem. , vol.277 , pp. 46552-46558
    • Zaganas, I.1    Spanaki, C.2    Karpusas, M.3    Plaitakis, A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.