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Volumn 15, Issue 1, 2014, Pages

Whole-Transcriptome profiling of formalin-fixed, paraffin-embedded renal cell carcinoma by RNA-seq

Author keywords

Formalin fixed paraffin embedded (FFPE); Gene expression; qPCR; Renal cell carcinoma (RCC); RNA seq

Indexed keywords

RIBOSOME RNA; FORMALDEHYDE; PARAFFIN; TUMOR MARKER;

EID: 84924328760     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-15-1087     Document Type: Article
Times cited : (57)

References (23)
  • 2
    • 41649114164 scopus 로고    scopus 로고
    • Enabling personalized cancer medicine through analysis of gene-expression patterns
    • van't Veer LJ, Bernards R: Enabling personalized cancer medicine through analysis of gene-expression patterns. Nature 2008, 452:564-570. 10.1038/nature06915.
    • (2008) Nature , vol.452 , pp. 564-570
    • van't Veer, L.J.1    Bernards, R.2
  • 4
    • 0344012538 scopus 로고    scopus 로고
    • Real-time polymerase chain reaction
    • Wilhelm J, Pingoud A: Real-time polymerase chain reaction. Chembiochem 2003, 4:1120-1128. 10.1002/cbic.200300662.
    • (2003) Chembiochem , vol.4 , pp. 1120-1128
    • Wilhelm, J.1    Pingoud, A.2
  • 5
    • 24944534978 scopus 로고    scopus 로고
    • Real-time PCR for mRNA quantitation
    • Wong ML, Medrano JF: Real-time PCR for mRNA quantitation. Biotechniques 2005, 39:75-85. 10.2144/05391RV01.
    • (2005) Biotechniques , vol.39 , pp. 75-85
    • Wong, M.L.1    Medrano, J.F.2
  • 6
    • 57749195712 scopus 로고    scopus 로고
    • RNA-Seq: a revolutionary tool for transcriptomics
    • Wang Z, Gerstein M, Snyder M: RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet 2009, 10:57-63. 10.1038/nrg2484.
    • (2009) Nat Rev Genet , vol.10 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 7
    • 84879890360 scopus 로고    scopus 로고
    • Comprehensive molecular characterization of clear cell renal cell carcinoma
    • Cancer Genome Atlas Research Network: Comprehensive molecular characterization of clear cell renal cell carcinoma. Nature 2013, 499:43-49. 10.1038/nature12222.
    • (2013) Nature , vol.499 , pp. 43-49
  • 13
    • 84874036845 scopus 로고    scopus 로고
    • High-throughput RNA sequencing of a formalin-fixed, paraffin-embedded autopsy lung tissue sample from the 1918 influenza pandemic
    • Xiao YL, Kash JC, Beres SB, Sheng ZM, Musser JM, Taubenberger JK: High-throughput RNA sequencing of a formalin-fixed, paraffin-embedded autopsy lung tissue sample from the 1918 influenza pandemic. J Pathol 2013, 229:535-545. 10.1002/path.4145.
    • (2013) J Pathol , vol.229 , pp. 535-545
    • Xiao, Y.L.1    Kash, J.C.2    Beres, S.B.3    Sheng, Z.M.4    Musser, J.M.5    Taubenberger, J.K.6
  • 15
    • 84880239387 scopus 로고    scopus 로고
    • Evaluation of a high-throughput, microfluidics platform for performing TaqMan™ qPCR using formalin-fixed paraffin-embedded tumors
    • Li P, Grigorenko E, Funari V, Enright E, Zhang H, Kim HL: Evaluation of a high-throughput, microfluidics platform for performing TaqMan™ qPCR using formalin-fixed paraffin-embedded tumors. Bioanalysis 2013, 5:1623-1633. 10.4155/bio.13.125.
    • (2013) Bioanalysis , vol.5 , pp. 1623-1633
    • Li, P.1    Grigorenko, E.2    Funari, V.3    Enright, E.4    Zhang, H.5    Kim, H.L.6
  • 16
    • 36448987120 scopus 로고    scopus 로고
    • Expression profiling of archival renal tumors by quantitative PCR to validate prognostic markers
    • Glenn ST, Jones CA, Liang P, Kaushik D, Gross KW, Kim HL: Expression profiling of archival renal tumors by quantitative PCR to validate prognostic markers. Biotechniques 2007, 43:639-640. 642-643, 647 10.2144/000112562
    • (2007) Biotechniques , vol.43 , pp. 639-640
    • Glenn, S.T.1    Jones, C.A.2    Liang, P.3    Kaushik, D.4    Gross, K.W.5    Kim, H.L.6
  • 17
    • 84882867857 scopus 로고    scopus 로고
    • Development of a robust protocol for gene expression analysis using formalin-fixed, paraffin-embedded liver transplant biopsy specimens
    • Thompson E, Burt AD, Barker CE, Kirby JA, Brain JG: Development of a robust protocol for gene expression analysis using formalin-fixed, paraffin-embedded liver transplant biopsy specimens. J Clin Pathol 2013, 66:815-818. 10.1136/jclinpath-2013-201548.
    • (2013) J Clin Pathol , vol.66 , pp. 815-818
    • Thompson, E.1    Burt, A.D.2    Barker, C.E.3    Kirby, J.A.4    Brain, J.G.5
  • 18
    • 0035859883 scopus 로고    scopus 로고
    • Gene expression profiling of clear cell renal cell carcinoma: gene identification and prognostic classification
    • Takahashi M, Rhodes DR, Furge KA, Kanayama H, Kagawa S, Haab BB, Teh BT: Gene expression profiling of clear cell renal cell carcinoma: gene identification and prognostic classification. Proc Natl Acad Sci U S A 2001, 98:9754-9759. 10.1073/pnas.171209998.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 9754-9759
    • Takahashi, M.1    Rhodes, D.R.2    Furge, K.A.3    Kanayama, H.4    Kagawa, S.5    Haab, B.B.6    Teh, B.T.7
  • 19
    • 32144434202 scopus 로고    scopus 로고
    • Gene expression profiling predicts survival in conventional renal cell carcinoma
    • Zhao H, Ljungberg B, Grankvist K, Rasmuson T, Tibshirani R, Brooks JD: Gene expression profiling predicts survival in conventional renal cell carcinoma. PLoS Med 2006, 3:e13. 10.1371/journal.pmed.0030013.
    • (2006) PLoS Med , vol.3 , pp. e13
    • Zhao, H.1    Ljungberg, B.2    Grankvist, K.3    Rasmuson, T.4    Tibshirani, R.5    Brooks, J.D.6
  • 23
    • 77949382950 scopus 로고    scopus 로고
    • Maximizing RNA yield from archival renal tumors and optimizing gene expression analysis
    • Glenn ST, Head KL, Teh BT, Gross KW, Kim HL: Maximizing RNA yield from archival renal tumors and optimizing gene expression analysis. J Biomol Screen 2010, 15:80-85. 10.1177/1087057109355059.
    • (2010) J Biomol Screen , vol.15 , pp. 80-85
    • Glenn, S.T.1    Head, K.L.2    Teh, B.T.3    Gross, K.W.4    Kim, H.L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.