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Volumn 15, Issue 1, 2014, Pages

Genes associated with thermosensitive genic male sterility in rice identified by comparative expression profiling

Author keywords

Male sterility transition; Meiosis stage; TGMS; Transcriptome profiling

Indexed keywords

AMINO ACID TRANSFER RNA LIGASE; DEAD BOX PROTEIN; ELONGATION FACTOR 1ALPHA; EUKARYOTIC INITIATION FACTOR 5B; INITIATION FACTOR; PEPTIDE CHAIN RELEASE FACTOR PROTEIN; POLYADENYLIC ACID BINDING PROTEIN; POLYPYRIMIDINE TRACT BINDING PROTEIN; RELEASING FACTOR; RIBOSOME PROTEIN; RIBOSOME PROTEIN L1P; RIBOSOME PROTEIN L24; RIBOSOME PROTEIN L27; RIBOSOME PROTEIN L37; UNCLASSIFIED DRUG; ZINC FINGER PROTEIN;

EID: 84924311234     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-15-1114     Document Type: Article
Times cited : (22)

References (92)
  • 2
    • 0036581108 scopus 로고    scopus 로고
    • Hybrid seed production and the challenge of propagating male-sterile plants
    • Perez-Prat E, van Lookeren Campagne MM: Hybrid seed production and the challenge of propagating male-sterile plants. Trends Plant Sci 2002,7(5):199-203. 10.1016/S1360-1385(02)02252-5.
    • (2002) Trends Plant Sci , vol.7 , Issue.5 , pp. 199-203
    • Perez-Prat, E.1    van Lookeren Campagne, M.M.2
  • 3
    • 77950454617 scopus 로고    scopus 로고
    • The flowering of Arabidopsis flower development
    • Irish VF: The flowering of Arabidopsis flower development. Plant J 2010,61(6):1014-1028. 10.1111/j.1365-313X.2009.04065.x.
    • (2010) Plant J , vol.61 , Issue.6 , pp. 1014-1028
    • Irish, V.F.1
  • 4
    • 0038120839 scopus 로고    scopus 로고
    • Comparative analysis of the Arabidopsis pollen transcriptome
    • Honys D, Twell D: Comparative analysis of the Arabidopsis pollen transcriptome. Plant Physiol 2003,132(2):640-652. 10.1104/pp.103.020925.
    • (2003) Plant Physiol , vol.132 , Issue.2 , pp. 640-652
    • Honys, D.1    Twell, D.2
  • 5
    • 3543013205 scopus 로고    scopus 로고
    • Transcriptional programs of early reproductive stages in Arabidopsis
    • Hennig L, Gruissem W, Grossniklaus U, Köhler C: Transcriptional programs of early reproductive stages in Arabidopsis. Plant Physiol 2004,135(3):1765-1775. 10.1104/pp.104.043182.
    • (2004) Plant Physiol , vol.135 , Issue.3 , pp. 1765-1775
    • Hennig, L.1    Gruissem, W.2    Grossniklaus, U.3    Köhler, C.4
  • 6
    • 26944493068 scopus 로고    scopus 로고
    • Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation
    • Pina C, Pinto F, Feijó JA, Becker JD: Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. Plant Physiol 2005,138(2):744-756. 10.1104/pp.104.057935.
    • (2005) Plant Physiol , vol.138 , Issue.2 , pp. 744-756
    • Pina, C.1    Pinto, F.2    Feijó, J.A.3    Becker, J.D.4
  • 7
    • 34748860416 scopus 로고    scopus 로고
    • Differential gene expression in Arabidopsis wild-type and mutant anthers: insights into anther cell differentiation and regulatory networks
    • Wijeratne AJ, Zhang W, Sun Y, Liu W, Albert R, Zheng Z, Oppenheimer DG, Zhao D, Ma H: Differential gene expression in Arabidopsis wild-type and mutant anthers: insights into anther cell differentiation and regulatory networks. Plant J 2007,52(1):14-29. 10.1111/j.1365-313X.2007.03217.x.
    • (2007) Plant J , vol.52 , Issue.1 , pp. 14-29
    • Wijeratne, A.J.1    Zhang, W.2    Sun, Y.3    Liu, W.4    Albert, R.5    Zheng, Z.6    Oppenheimer, D.G.7    Zhao, D.8    Ma, H.9
  • 8
    • 84865472809 scopus 로고    scopus 로고
    • Comparative transcript profiling of a male sterile cybrid pummelo and its fertile type revealed altered gene expression related to flower development
    • Zheng B, Wu X, Ge X, Deng X, Grosser JW, Guo W: Comparative transcript profiling of a male sterile cybrid pummelo and its fertile type revealed altered gene expression related to flower development. PLoS One 2012,7(8):e43758. 10.1371/journal.pone.0043758.
    • (2012) PLoS One , vol.7 , Issue.8 , pp. e43758
    • Zheng, B.1    Wu, X.2    Ge, X.3    Deng, X.4    Grosser, J.W.5    Guo, W.6
  • 10
    • 0031923235 scopus 로고    scopus 로고
    • Efficiency and technical progress in traditional and modern agriculture: evidence from rice production in China
    • Xu X, Jeffrey SR: Efficiency and technical progress in traditional and modern agriculture: evidence from rice production in China. Agric Econ 1998,18(2):157-165. 10.1016/S0169-5150(97)00050-9.
    • (1998) Agric Econ , vol.18 , Issue.2 , pp. 157-165
    • Xu, X.1    Jeffrey, S.R.2
  • 12
    • 0000554530 scopus 로고    scopus 로고
    • Hybrid rice: genetics, breeding, and seed production
    • Oxford, UK: John Wiley and Sons, Inc
    • Li J, Yuan L: Hybrid rice: genetics, breeding, and seed production. In Plant Breeding Reviews. Oxford, UK: John Wiley and Sons, Inc; 2010:15-158.
    • (2010) Plant Breeding Reviews , pp. 15-158
    • Li, J.1    Yuan, L.2
  • 13
    • 0002893201 scopus 로고
    • Progress of two-line system hybrid rice breeding
    • Yuan L: Progress of two-line system hybrid rice breeding. Sci Agric Sin 1990,23(3):1-6.
    • (1990) Sci Agric Sin , vol.23 , Issue.3 , pp. 1-6
    • Yuan, L.1
  • 14
    • 70349311689 scopus 로고    scopus 로고
    • Temperature-sensitive splicing is an important molecular regulation mechanism of thermosensitive genic male sterility in rice
    • Chen R, Pan Y, Wang Y, Zhu L, He G: Temperature-sensitive splicing is an important molecular regulation mechanism of thermosensitive genic male sterility in rice. Chin Sci Bull 2009,54(14):2354-2362. 10.1007/s11434-009-0349-2.
    • (2009) Chin Sci Bull , vol.54 , Issue.14 , pp. 2354-2362
    • Chen, R.1    Pan, Y.2    Wang, Y.3    Zhu, L.4    He, G.5
  • 16
    • 0000075903 scopus 로고
    • Tagging and mapping the thermo-sensitive genic male-sterile gene in rice (Oryza sativa L.) with molecular markers
    • Wang B, Xu W, Wang J, Wu W, Zheng H, Yang Z, Ray JD, Nguyen HT: Tagging and mapping the thermo-sensitive genic male-sterile gene in rice ( Oryza sativa L.) with molecular markers. Theor Appl Genet 1995,91(6-7):1111-1114.
    • (1995) Theor Appl Genet , vol.91 , Issue.6-7 , pp. 1111-1114
    • Wang, B.1    Xu, W.2    Wang, J.3    Wu, W.4    Zheng, H.5    Yang, Z.6    Ray, J.D.7    Nguyen, H.T.8
  • 17
    • 0031445569 scopus 로고    scopus 로고
    • Linkage analysis of thermosensitive genic male sterility gene, tms-2 in rice (Oryza sativa L.)
    • Yamaguchill Y, Ikedazl R, Hirasawazl H, Minamin M, Ujiharall A: Linkage analysis of thermosensitive genic male sterility gene, tms-2 in rice ( Oryza sativa L.). Breeding Sci 1997, 47:371-373.
    • (1997) Breeding Sci , vol.47 , pp. 371-373
    • Yamaguchill, Y.1    Ikedazl, R.2    Hirasawazl, H.3    Minamin, M.4    Ujiharall, A.5
  • 18
    • 0031408845 scopus 로고    scopus 로고
    • Molecular mapping of a thermosensitive genetic male sterility gene in rice using bulked segregant analysis
    • Subudhi PK, Borkakati RP, Virmani SS, Huang N: Molecular mapping of a thermosensitive genetic male sterility gene in rice using bulked segregant analysis. Genome 1997,40(2):188-194. 10.1139/g97-027.
    • (1997) Genome , vol.40 , Issue.2 , pp. 188-194
    • Subudhi, P.K.1    Borkakati, R.P.2    Virmani, S.S.3    Huang, N.4
  • 19
    • 0034007777 scopus 로고    scopus 로고
    • Molecular mapping of a rice gene conditioning thermosensitive genic male sterility using AFLP, RFLP and SSR techniques
    • Dong NV, Subudhi PK, Luong PN, Quang VD, Quy TD, Zheng H, Wang B, Nguyen HT: Molecular mapping of a rice gene conditioning thermosensitive genic male sterility using AFLP, RFLP and SSR techniques. Theor Appl Genet 2000,100(5):727-734. 10.1007/s001220051345.
    • (2000) Theor Appl Genet , vol.100 , Issue.5 , pp. 727-734
    • Dong, N.V.1    Subudhi, P.K.2    Luong, P.N.3    Quang, V.D.4    Quy, T.D.5    Zheng, H.6    Wang, B.7    Nguyen, H.T.8
  • 20
    • 0141976687 scopus 로고    scopus 로고
    • Fine mapping of the rice thermo-sensitive genic male-sterile gene tms5
    • Wang Y, Xing Q, Deng Q, Liang F, Yuan L, Weng M, Wang B: Fine mapping of the rice thermo-sensitive genic male-sterile gene tms5. Theor Appl Genet 2003,107(5):917-921. 10.1007/s00122-003-1327-8.
    • (2003) Theor Appl Genet , vol.107 , Issue.5 , pp. 917-921
    • Wang, Y.1    Xing, Q.2    Deng, Q.3    Liang, F.4    Yuan, L.5    Weng, M.6    Wang, B.7
  • 21
    • 27744573880 scopus 로고    scopus 로고
    • Genetic characterization and fine mapping of a novel thermo-sensitive genic male-sterile gene tms6 in rice (Oryza sativa L.)
    • Lee D, Chen L, Suh H: Genetic characterization and fine mapping of a novel thermo-sensitive genic male-sterile gene tms6 in rice ( Oryza sativa L.). Theor Appl Genet 2005,111(7):1271-1277. 10.1007/s00122-005-0044-x.
    • (2005) Theor Appl Genet , vol.111 , Issue.7 , pp. 1271-1277
    • Lee, D.1    Chen, L.2    Suh, H.3
  • 22
    • 0034838033 scopus 로고    scopus 로고
    • Molecular mapping of the reverse thermo-sensitive genic male-sterile gene (rtms1) in rice
    • Jia J, Zhang D, Li C, Qu X, Wang S, Chamarerk V, Nguyen HT, Wang B: Molecular mapping of the reverse thermo-sensitive genic male-sterile gene (rtms1) in rice. Theor Appl Genet 2001,103(4):607-612. 10.1007/PL00002916.
    • (2001) Theor Appl Genet , vol.103 , Issue.4 , pp. 607-612
    • Jia, J.1    Zhang, D.2    Li, C.3    Qu, X.4    Wang, S.5    Chamarerk, V.6    Nguyen, H.T.7    Wang, B.8
  • 23
    • 84876163715 scopus 로고    scopus 로고
    • Genetic analysis and fine mapping of tms9, a novel thermosensitive genic male-sterile gene in rice (Oryza sativa L.)
    • Sheng Z, Wei X, Shao G, Chen M, Song J, Tang S, Luo J, Hu Y, Hu P, Chen L: Genetic analysis and fine mapping of tms9, a novel thermosensitive genic male-sterile gene in rice ( Oryza sativa L.). Plant Breed 2013,132(2):159-164. 10.1111/pbr.12024.
    • (2013) Plant Breed , vol.132 , Issue.2 , pp. 159-164
    • Sheng, Z.1    Wei, X.2    Shao, G.3    Chen, M.4    Song, J.5    Tang, S.6    Luo, J.7    Hu, Y.8    Hu, P.9    Chen, L.10
  • 24
    • 0034784836 scopus 로고    scopus 로고
    • Identification of an 85-kb DNA fragment containing pms1, a locus for photoperiod-sensitive genic male sterility in rice
    • Liu N, Shan Y, Wang F, Xu C, Peng K, Li X, Zhang Q: Identification of an 85-kb DNA fragment containing pms1, a locus for photoperiod-sensitive genic male sterility in rice. Mol Genet Genomics 2001,266(2):271-275. 10.1007/s004380100553.
    • (2001) Mol Genet Genomics , vol.266 , Issue.2 , pp. 271-275
    • Liu, N.1    Shan, Y.2    Wang, F.3    Xu, C.4    Peng, K.5    Li, X.6    Zhang, Q.7
  • 25
    • 0028059292 scopus 로고
    • Using bulked extremes and recessive class to map genes for photoperiod-sensitive genic male sterility in rice
    • Zhang Q, Shen B, Dai X, Mei M, Saghai Maroof MA, Li Z: Using bulked extremes and recessive class to map genes for photoperiod-sensitive genic male sterility in rice. Proc Natl Acad Sci U S A 1994,91(18):8675-8679. 10.1073/pnas.91.18.8675.
    • (1994) Proc Natl Acad Sci U S A , vol.91 , Issue.18 , pp. 8675-8679
    • Zhang, Q.1    Shen, B.2    Dai, X.3    Mei, M.4    Saghai Maroof, M.A.5    Li, Z.6
  • 26
    • 23044456199 scopus 로고    scopus 로고
    • Localization of pms3, a gene for photoperiod-sensitive genic male sterility, to a 28.4-kb DNA fragment
    • Lu Q, Li X, Guo D, Xu C, Zhang Q: Localization of pms3, a gene for photoperiod-sensitive genic male sterility, to a 28.4-kb DNA fragment. Mol Genet Genomics 2005,273(6):507-511. 10.1007/s00438-005-1155-4.
    • (2005) Mol Genet Genomics , vol.273 , Issue.6 , pp. 507-511
    • Lu, Q.1    Li, X.2    Guo, D.3    Xu, C.4    Zhang, Q.5
  • 27
    • 79952260743 scopus 로고    scopus 로고
    • Fine mapping and candidate gene analysis of ptgms2-1, the photoperiod-thermo-sensitive genic male sterile gene in rice (Oryza sativa L.)
    • Xu J, Wang B, Wu Y, Du P, Wang J, Wang M, Yi C, Gu M, Liang G: Fine mapping and candidate gene analysis of ptgms2-1, the photoperiod-thermo-sensitive genic male sterile gene in rice ( Oryza sativa L.). Theor Appl Genet 2011,122(2):365-372. 10.1007/s00122-010-1452-0.
    • (2011) Theor Appl Genet , vol.122 , Issue.2 , pp. 365-372
    • Xu, J.1    Wang, B.2    Wu, Y.3    Du, P.4    Wang, J.5    Wang, M.6    Yi, C.7    Gu, M.8    Liang, G.9
  • 28
    • 79960439532 scopus 로고    scopus 로고
    • Fine mapping and candidate gene prediction of the photoperiod and thermo-sensitive genic male sterile gene pms1(t) in rice
    • Zhou Y, Zhang X, Xue Q: Fine mapping and candidate gene prediction of the photoperiod and thermo-sensitive genic male sterile gene pms1(t) in rice. J Zhejiang Univ Sci B 2011,12(6):436-447. 10.1631/jzus.B1000306.
    • (2011) J Zhejiang Univ Sci B , vol.12 , Issue.6 , pp. 436-447
    • Zhou, Y.1    Zhang, X.2    Xue, Q.3
  • 29
    • 55949118389 scopus 로고    scopus 로고
    • Molecular mapping of two reverse photoperiod-sensitive genic male sterility genes (rpms1 and rpms2) in rice (Oryza sativa L.)
    • Peng H, Zhang Z, Wu B, Chen X, Zhang G, Zhang Z, Wan B, Lu Y: Molecular mapping of two reverse photoperiod-sensitive genic male sterility genes (rpms1 and rpms2) in rice ( Oryza sativa L.). Theor Appl Genet 2008,118(1):77-83. 10.1007/s00122-008-0877-1.
    • (2008) Theor Appl Genet , vol.118 , Issue.1 , pp. 77-83
    • Peng, H.1    Zhang, Z.2    Wu, B.3    Chen, X.4    Zhang, G.5    Zhang, Z.6    Wan, B.7    Lu, Y.8
  • 30
    • 84863115947 scopus 로고    scopus 로고
    • A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice
    • Ding J, Lu Q, Ouyang Y, Mao H, Zhang P, Yao J, Xu C, Li X, Xiao J, Zhang Q: A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice. Proc Natl Acad Sci U S A 2012,109(7):2654-2659. 10.1073/pnas.1121374109.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , Issue.7 , pp. 2654-2659
    • Ding, J.1    Lu, Q.2    Ouyang, Y.3    Mao, H.4    Zhang, P.5    Yao, J.6    Xu, C.7    Li, X.8    Xiao, J.9    Zhang, Q.10
  • 31
    • 84862777808 scopus 로고    scopus 로고
    • Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA
    • Zhou H, Liu Q, Li J, Jiang D, Zhou L, Wu P, Lu S, Li F, Zhu L, Liu Z, Chen L, Liu Y, Zhuang C: Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA. Cell Res 2012,22(4):649-660. 10.1038/cr.2012.28.
    • (2012) Cell Res , vol.22 , Issue.4 , pp. 649-660
    • Zhou, H.1    Liu, Q.2    Li, J.3    Jiang, D.4    Zhou, L.5    Wu, P.6    Lu, S.7    Li, F.8    Zhu, L.9    Liu, Z.10    Chen, L.11    Liu, Y.12    Zhuang, C.13
  • 32
    • 84872004161 scopus 로고    scopus 로고
    • Mutation in CSA creates a new photoperiod-sensitive genic male sterile line applicable for hybrid rice seed production
    • Zhang H, Xu C, He Y, Zong J, Yang X, Si H, Sun Z, Hu J, Liang W, Zhang D: Mutation in CSA creates a new photoperiod-sensitive genic male sterile line applicable for hybrid rice seed production. Proc Natl Acad Sci U S A 2013,110(1):76-81. 10.1073/pnas.1213041110.
    • (2013) Proc Natl Acad Sci U S A , vol.110 , Issue.1 , pp. 76-81
    • Zhang, H.1    Xu, C.2    He, Y.3    Zong, J.4    Yang, X.5    Si, H.6    Sun, Z.7    Hu, J.8    Liang, W.9    Zhang, D.10
  • 34
    • 34250769079 scopus 로고    scopus 로고
    • Rice UDP-glucose pyrophosphorylase1 is essential for pollen callose deposition and its cosuppression results in a new type of thermosensitive genic male sterility
    • Chen R, Zhao X, Shao Z, Wei Z, Wang Y, Zhu L, Zhao J, Sun M, He R, He G: Rice UDP-glucose pyrophosphorylase1 is essential for pollen callose deposition and its cosuppression results in a new type of thermosensitive genic male sterility. Plant Cell 2007,19(3):847-861. 10.1105/tpc.106.044123.
    • (2007) Plant Cell , vol.19 , Issue.3 , pp. 847-861
    • Chen, R.1    Zhao, X.2    Shao, Z.3    Wei, Z.4    Wang, Y.5    Zhu, L.6    Zhao, J.7    Sun, M.8    He, R.9    He, G.10
  • 35
    • 17644367988 scopus 로고    scopus 로고
    • Pollen development and its stages in rice (Oryza sativa L.)
    • Feng J, Lu Y, Liu X, Xu X: Pollen development and its stages in rice ( Oryza sativa L.). Zhongguo shuidao kexue 2001,15(1):21-28.
    • (2001) Zhongguo shuidao kexue , vol.15 , Issue.1 , pp. 21-28
    • Feng, J.1    Lu, Y.2    Liu, X.3    Xu, X.4
  • 37
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Smyth GK: Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 2004,3(1):3.
    • (2004) Stat Appl Genet Mol Biol , vol.3 , Issue.1 , pp. 3
    • Smyth, G.K.1
  • 38
    • 33745626459 scopus 로고    scopus 로고
    • Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
    • Alexa A, Rahnenführer J, Lengauer T: Improved scoring of functional groups from gene expression data by decorrelating GO graph structure. Bioinformatics 2006,22(13):1600-1607. 10.1093/bioinformatics/btl140.
    • (2006) Bioinformatics , vol.22 , Issue.13 , pp. 1600-1607
    • Alexa, A.1    Rahnenführer, J.2    Lengauer, T.3
  • 39
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl MW: A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 2001,29(9):e45. 10.1093/nar/29.9.e45.
    • (2001) Nucleic Acids Res , vol.29 , Issue.9 , pp. e45
    • Pfaffl, M.W.1
  • 40
    • 58049198442 scopus 로고    scopus 로고
    • Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles
    • Prieto C, Risueño A, Fontanillo C, De Las Rivas J: Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles. PLoS One 2008,3(12):e3911. 10.1371/journal.pone.0003911.
    • (2008) PLoS One , vol.3 , Issue.12 , pp. e3911
    • Prieto, C.1    Risueño, A.2    Fontanillo, C.3    De Las Rivas, J.4
  • 41
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: understanding the cell's functional organization
    • Barabasi A-L, Oltvai ZN: Network biology: understanding the cell's functional organization. Nat Rev Genet 2004,5(2):101-113. 10.1038/nrg1272.
    • (2004) Nat Rev Genet , vol.5 , Issue.2 , pp. 101-113
    • Barabasi, A.-L.1    Oltvai, Z.N.2
  • 42
    • 0037199968 scopus 로고    scopus 로고
    • Hierarchical organization of modularity in metabolic networks
    • Ravasz E, Somera AL, Mongru DA, Oltvai ZN, Barabási A-L: Hierarchical organization of modularity in metabolic networks. Science 2002,297(5586):1551-1555. 10.1126/science.1073374.
    • (2002) Science , vol.297 , Issue.5586 , pp. 1551-1555
    • Ravasz, E.1    Somera, A.L.2    Mongru, D.A.3    Oltvai, Z.N.4    Barabási, A.-L.5
  • 43
    • 77950855542 scopus 로고    scopus 로고
    • Genes related to the very early stage of ConA-induced fulminant hepatitis: a gene-chip-based study in a mouse model
    • Chen F, Zhu H, Zhou L, Li J, Zhao L, Wu S, Wang J, Liu W, Chen Z: Genes related to the very early stage of ConA-induced fulminant hepatitis: a gene-chip-based study in a mouse model. BMC Genomics 2010,11(1):240. 10.1186/1471-2164-11-240.
    • (2010) BMC Genomics , vol.11 , Issue.1 , pp. 240
    • Chen, F.1    Zhu, H.2    Zhou, L.3    Li, J.4    Zhao, L.5    Wu, S.6    Wang, J.7    Liu, W.8    Chen, Z.9
  • 44
    • 77649287721 scopus 로고    scopus 로고
    • Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress
    • Yun K-Y, Park MR, Mohanty B, Herath V, Xu F, Mauleon R, Wijaya E, Bajic VB, Bruskiewich R, de los Reyes BG: Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress. BMC Plant Biol 2010,10(1):16. 10.1186/1471-2229-10-16.
    • (2010) BMC Plant Biol , vol.10 , Issue.1 , pp. 16
    • Yun, K.-Y.1    Park, M.R.2    Mohanty, B.3    Herath, V.4    Xu, F.5    Mauleon, R.6    Wijaya, E.7    Bajic, V.B.8    Bruskiewich, R.9    de los Reyes, B.G.10
  • 45
    • 84865069713 scopus 로고    scopus 로고
    • Comparative transcriptome profiling of chilling stress responsiveness in two contrasting rice genotypes
    • Zhang T, Zhao X, Wang W, Pan Y, Huang L, Liu X, Zong Y, Zhu L, Yang D, Fu B: Comparative transcriptome profiling of chilling stress responsiveness in two contrasting rice genotypes. PLoS One 2012,7(8):e43274. 10.1371/journal.pone.0043274.
    • (2012) PLoS One , vol.7 , Issue.8 , pp. e43274
    • Zhang, T.1    Zhao, X.2    Wang, W.3    Pan, Y.4    Huang, L.5    Liu, X.6    Zong, Y.7    Zhu, L.8    Yang, D.9    Fu, B.10
  • 46
    • 0037204996 scopus 로고    scopus 로고
    • The jasmonate pathway
    • Liechti R, Farmer EE: The jasmonate pathway. Science 2002,296(5573):1649-1650. 10.1126/science.1071547.
    • (2002) Science , vol.296 , Issue.5573 , pp. 1649-1650
    • Liechti, R.1    Farmer, E.E.2
  • 47
    • 0028121490 scopus 로고
    • Arabidopsis mutants selected for resistance to the phytotoxin coronatine are male sterile, insensitive to methyl jasmonate, and resistant to a bacterial pathogen
    • Feys BJ, Benedetti CE, Penfold CN, Turner JG: Arabidopsis mutants selected for resistance to the phytotoxin coronatine are male sterile, insensitive to methyl jasmonate, and resistant to a bacterial pathogen. Plant Cell 1994,6(5):751-759. 10.1105/tpc.6.5.751.
    • (1994) Plant Cell , vol.6 , Issue.5 , pp. 751-759
    • Feys, B.J.1    Benedetti, C.E.2    Penfold, C.N.3    Turner, J.G.4
  • 48
    • 0034740304 scopus 로고    scopus 로고
    • The DEFECTIVE IN ANTHER DEHISCENCE1 gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis
    • Ishiguro S, Kawai-Oda A, Ueda J, Nishida I, Okada K: The DEFECTIVE IN ANTHER DEHISCENCE1 gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis. Plant Cell 2001,13(10):2191-2209. 10.1105/tpc.13.10.2191.
    • (2001) Plant Cell , vol.13 , Issue.10 , pp. 2191-2209
    • Ishiguro, S.1    Kawai-Oda, A.2    Ueda, J.3    Nishida, I.4    Okada, K.5
  • 50
    • 0027130084 scopus 로고
    • Male gametophyte development
    • McCormick S: Male gametophyte development. Plant Cell 1993,5(10):1265. 10.1105/tpc.5.10.1265.
    • (1993) Plant Cell , vol.5 , Issue.10 , pp. 1265
    • McCormick, S.1
  • 51
    • 80053174264 scopus 로고    scopus 로고
    • Comparative transcriptomes profiling of photoperiod-sensitive male sterile rice Nongken 58S during the male sterility transition between short-day and long-day
    • Wang W, Liu Z, Guo Z, Song G, Cheng Q, Jiang D, Zhu Y, Yang D: Comparative transcriptomes profiling of photoperiod-sensitive male sterile rice Nongken 58S during the male sterility transition between short-day and long-day. BMC Genomics 2011,12(1):1-10. 10.1186/1471-2164-12-1.
    • (2011) BMC Genomics , vol.12 , Issue.1 , pp. 1-10
    • Wang, W.1    Liu, Z.2    Guo, Z.3    Song, G.4    Cheng, Q.5    Jiang, D.6    Zhu, Y.7    Yang, D.8
  • 52
    • 49749117992 scopus 로고    scopus 로고
    • Quantitative proteomic analysis of short photoperiod and low-temperature responses in bark tissues of peach (Prunus persica L. Batsch)
    • Renaut J, Hausman J-F, Bassett C, Artlip T, Cauchie H-M, Witters E, Wisniewski M: Quantitative proteomic analysis of short photoperiod and low-temperature responses in bark tissues of peach (Prunus persica L. Batsch). Tree Genetics & Genomes 2008,4(4):589-600. 10.1007/s11295-008-0134-4.
    • (2008) Tree Genetics & Genomes , vol.4 , Issue.4 , pp. 589-600
    • Renaut, J.1    Hausman, J.-F.2    Bassett, C.3    Artlip, T.4    Cauchie, H.-M.5    Witters, E.6    Wisniewski, M.7
  • 53
    • 0032478635 scopus 로고    scopus 로고
    • Arabidopsis CBF1 overexpression Induces COR genes and enhances freezing tolerance
    • Jaglo-Ottosen KR, Gilmour SJ, Zarka DG, Schabenberger O, Thomashow MF: Arabidopsis CBF1 overexpression Induces COR genes and enhances freezing tolerance. Science 1998,280(5360):104-106. 10.1126/science.280.5360.104.
    • (1998) Science , vol.280 , Issue.5360 , pp. 104-106
    • Jaglo-Ottosen, K.R.1    Gilmour, S.J.2    Zarka, D.G.3    Schabenberger, O.4    Thomashow, M.F.5
  • 54
    • 46249107630 scopus 로고    scopus 로고
    • Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice
    • Wang Q, Guan Y, Wu Y, Chen H, Chen F, Chu C: Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice. Plant Mol Biol 2008,67(6):589-602. 10.1007/s11103-008-9340-6.
    • (2008) Plant Mol Biol , vol.67 , Issue.6 , pp. 589-602
    • Wang, Q.1    Guan, Y.2    Wu, Y.3    Chen, H.4    Chen, F.5    Chu, C.6
  • 56
    • 33747875596 scopus 로고    scopus 로고
    • Effects of water temperature on male sterility of the thermo-sensitive genic male sterile (TGMS) rice lines under the simulated low air temperature conditions appeared occasionally in high summer
    • Xiao G, Yuan L: Effects of water temperature on male sterility of the thermo-sensitive genic male sterile (TGMS) rice lines under the simulated low air temperature conditions appeared occasionally in high summer. Chinese J Rice Sci 1997,11(4):241-244.
    • (1997) Chinese J Rice Sci , vol.11 , Issue.4 , pp. 241-244
    • Xiao, G.1    Yuan, L.2
  • 57
    • 84911319347 scopus 로고
    • Studies on the thermo-sensitive period of fertility alteration in photoperiod-sensitive genic male sterile rice
    • Zeng H, Zhang Z, Yuan S, Li Y, Zhang D: Studies on the thermo-sensitive period of fertility alteration in photoperiod-sensitive genic male sterile rice. J Huazhong U 1993,12(5):401-406.
    • (1993) J Huazhong U , vol.12 , Issue.5 , pp. 401-406
    • Zeng, H.1    Zhang, Z.2    Yuan, S.3    Li, Y.4    Zhang, D.5
  • 58
    • 33745145846 scopus 로고    scopus 로고
    • Transcriptional and post-transcriptional regulation of the circadian clock of cyanobacteria and Neurospora
    • Brunner M, Schafmeier T: Transcriptional and post-transcriptional regulation of the circadian clock of cyanobacteria and Neurospora . Genes Dev 2006,20(9):1061-1074. 10.1101/gad.1410406.
    • (2006) Genes Dev , vol.20 , Issue.9 , pp. 1061-1074
    • Brunner, M.1    Schafmeier, T.2
  • 59
    • 24344437155 scopus 로고    scopus 로고
    • Molecular mechanism of temperature sensing by the circadian clock of Neurospora crassa
    • Diernfellner AC, Schafmeier T, Merrow MW, Brunner M: Molecular mechanism of temperature sensing by the circadian clock of Neurospora crassa . Genes Dev 2005,19(17):1968-1973. 10.1101/gad.345905.
    • (2005) Genes Dev , vol.19 , Issue.17 , pp. 1968-1973
    • Diernfellner, A.C.1    Schafmeier, T.2    Merrow, M.W.3    Brunner, M.4
  • 60
    • 84907584464 scopus 로고    scopus 로고
    • Translational regulation of the DOUBLETIME/CKIδ/kinase by LARK contributes to circadian period modulation
    • Huang Y, McNeil GP, Jackson FR: Translational regulation of the DOUBLETIME/CKIδ/ kinase by LARK contributes to circadian period modulation. PLoS Genet 2014,10(9):e1004536. 10.1371/journal.pgen.1004536.
    • (2014) PLoS Genet , vol.10 , Issue.9 , pp. e1004536
    • Huang, Y.1    McNeil, G.P.2    Jackson, F.R.3
  • 61
    • 0141993704 scopus 로고    scopus 로고
    • A gene-coexpression network for global discovery of conserved genetic modules
    • Stuart JM, Segal E, Koller D, Kim SK: A gene-coexpression network for global discovery of conserved genetic modules. Science 2003,302(5643):249-255. 10.1126/science.1087447.
    • (2003) Science , vol.302 , Issue.5643 , pp. 249-255
    • Stuart, J.M.1    Segal, E.2    Koller, D.3    Kim, S.K.4
  • 62
    • 68949101233 scopus 로고    scopus 로고
    • Post-transcriptional regulation of gene expression in plants during abiotic stress
    • Floris M, Mahgoub H, Lanet E, Robaglia C, Menand B: Post-transcriptional regulation of gene expression in plants during abiotic stress. Int J Mol Sci 2009,10(7):3168-3185. 10.3390/ijms10073168.
    • (2009) Int J Mol Sci , vol.10 , Issue.7 , pp. 3168-3185
    • Floris, M.1    Mahgoub, H.2    Lanet, E.3    Robaglia, C.4    Menand, B.5
  • 65
    • 60349104299 scopus 로고    scopus 로고
    • The spliceosome: design principles of a dynamic RNP machine
    • Wahl MC, Will CL, Lührmann R: The spliceosome: design principles of a dynamic RNP machine. Cell 2009,136(4):701-718. 10.1016/j.cell.2009.02.009.
    • (2009) Cell , vol.136 , Issue.4 , pp. 701-718
    • Wahl, M.C.1    Will, C.L.2    Lührmann, R.3
  • 66
    • 78449290661 scopus 로고    scopus 로고
    • The spliceosomal proteome: at the heart of the largest cellular ribonucleoprotein machine
    • Valadkhan S, Jaladat Y: The spliceosomal proteome: at the heart of the largest cellular ribonucleoprotein machine. Proteomics 2010,10(22):4128-4141. 10.1002/pmic.201000354.
    • (2010) Proteomics , vol.10 , Issue.22 , pp. 4128-4141
    • Valadkhan, S.1    Jaladat, Y.2
  • 68
    • 84877338806 scopus 로고    scopus 로고
    • Alterations of alternative splicing patterns of Ser/Arg-rich (SR) genes in response to hormones and stresses treatments in different ecotypes of rice (Oryza sativa)
    • Zhang P, Deng H, Xiao F, Liu Y: Alterations of alternative splicing patterns of Ser/Arg-rich (SR) genes in response to hormones and stresses treatments in different ecotypes of rice ( Oryza sativa ). J Integr Agric 2013,12(5):737-748. 10.1016/S2095-3119(13)60260-9.
    • (2013) J Integr Agric , vol.12 , Issue.5 , pp. 737-748
    • Zhang, P.1    Deng, H.2    Xiao, F.3    Liu, Y.4
  • 69
    • 33645752060 scopus 로고    scopus 로고
    • The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA
    • Isshiki M, Tsumoto A, Shimamoto K: The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA. Plant Cell 2006,18(1):146-158. 10.1105/tpc.105.037069.
    • (2006) Plant Cell , vol.18 , Issue.1 , pp. 146-158
    • Isshiki, M.1    Tsumoto, A.2    Shimamoto, K.3
  • 70
    • 0030218143 scopus 로고    scopus 로고
    • The SR protein family: pleiotropic functions in pre-mRNA splicing
    • Valcárcel J, Green MR: The SR protein family: pleiotropic functions in pre-mRNA splicing. Trends Biochem Sci 1996,21(8):296-301. 10.1016/S0968-0004(96)10039-6.
    • (1996) Trends Biochem Sci , vol.21 , Issue.8 , pp. 296-301
    • Valcárcel, J.1    Green, M.R.2
  • 71
    • 60149092037 scopus 로고    scopus 로고
    • Involvement of polypyrimidine tract-binding protein (PTB)-related proteins in pollen germination in Arabidopsis
    • Wang S, Okamoto T: Involvement of polypyrimidine tract-binding protein (PTB)-related proteins in pollen germination in Arabidopsis. Plant Cell Physiol 2009,50(2):179-190.
    • (2009) Plant Cell Physiol , vol.50 , Issue.2 , pp. 179-190
    • Wang, S.1    Okamoto, T.2
  • 72
    • 78649550144 scopus 로고    scopus 로고
    • Polypyrimidine tract-binding protein homologues from Arabidopsis underlie regulatory circuits based on alternative splicing and downstream control
    • Stauffer E, Westermann A, Wagner G, Wachter A: Polypyrimidine tract-binding protein homologues from Arabidopsis underlie regulatory circuits based on alternative splicing and downstream control. Plant J 2010,64(2):243-255. 10.1111/j.1365-313X.2010.04321.x.
    • (2010) Plant J , vol.64 , Issue.2 , pp. 243-255
    • Stauffer, E.1    Westermann, A.2    Wagner, G.3    Wachter, A.4
  • 73
    • 33847343883 scopus 로고    scopus 로고
    • Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses
    • Palusa SG, Ali GS, Reddy ASN: Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses. Plant J 2007,49(6):1091-1107. 10.1111/j.1365-313X.2006.03020.x.
    • (2007) Plant J , vol.49 , Issue.6 , pp. 1091-1107
    • Palusa, S.G.1    Ali, G.S.2    Reddy, A.S.N.3
  • 74
    • 0036332994 scopus 로고    scopus 로고
    • HUA ENHANCER2, a putative DExH-box RNA helicase, maintains homeotic B and C gene expression in Arabidopsis
    • Western TL, Cheng Y, Liu J, Chen X: HUA ENHANCER2, a putative DExH-box RNA helicase, maintains homeotic B and C gene expression in Arabidopsis. Development 2002,129(7):1569-1581.
    • (2002) Development , vol.129 , Issue.7 , pp. 1569-1581
    • Western, T.L.1    Cheng, Y.2    Liu, J.3    Chen, X.4
  • 75
    • 80053562102 scopus 로고    scopus 로고
    • MTR4, a putative RNA helicase and exosome co-factor, is required for proper rRNA biogenesis and development in Arabidopsis thaliana
    • Lange H, Sement FM, Gagliardi D: MTR4, a putative RNA helicase and exosome co-factor, is required for proper rRNA biogenesis and development in Arabidopsis thaliana. Plant J 2011,68(1):51-63. 10.1111/j.1365-313X.2011.04675.x.
    • (2011) Plant J , vol.68 , Issue.1 , pp. 51-63
    • Lange, H.1    Sement, F.M.2    Gagliardi, D.3
  • 76
    • 33749134437 scopus 로고    scopus 로고
    • DExD/H box RNA helicases: multifunctional proteins with important roles in transcriptional regulation
    • Fuller-Pace FV: DExD/H box RNA helicases: multifunctional proteins with important roles in transcriptional regulation. Nucleic Acids Res 2006,34(15):4206-4215. 10.1093/nar/gkl460.
    • (2006) Nucleic Acids Res , vol.34 , Issue.15 , pp. 4206-4215
    • Fuller-Pace, F.V.1
  • 77
    • 35348972557 scopus 로고    scopus 로고
    • Genome-wide identification of C2H2 zinc-finger gene family in rice and their phylogeny and expression analysis
    • Agarwal P, Arora R, Ray S, Singh A, Singh V, Takatsuji H, Kapoor S, Tyagi A: Genome-wide identification of C2H2 zinc-finger gene family in rice and their phylogeny and expression analysis. Plant Mol Biol 2007,65(4):467-485. 10.1007/s11103-007-9199-y.
    • (2007) Plant Mol Biol , vol.65 , Issue.4 , pp. 467-485
    • Agarwal, P.1    Arora, R.2    Ray, S.3    Singh, A.4    Singh, V.5    Takatsuji, H.6    Kapoor, S.7    Tyagi, A.8
  • 79
    • 69249087723 scopus 로고    scopus 로고
    • STAMENLESS 1, encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice
    • Xiao H, Tang J, Li Y, Wang W, Li X, Jin L, Xie R, Luo H, Zhao X, Meng Z, He G, Zhu L: STAMENLESS 1 , encoding a single C2H2 zinc finger protein, regulates floral organ identity in rice. Plant J 2009,59(5):789-801. 10.1111/j.1365-313X.2009.03913.x.
    • (2009) Plant J , vol.59 , Issue.5 , pp. 789-801
    • Xiao, H.1    Tang, J.2    Li, Y.3    Wang, W.4    Li, X.5    Jin, L.6    Xie, R.7    Luo, H.8    Zhao, X.9    Meng, Z.10    He, G.11    Zhu, L.12
  • 80
    • 0035822642 scopus 로고    scopus 로고
    • Analysis of an essential requirement for the poly(A) binding protein function using cross-species complementation
    • Chekanova JA, Shaw RJ, Belostotsky DA: Analysis of an essential requirement for the poly(A) binding protein function using cross-species complementation. Curr Biol 2001,11(15):1207-1214. 10.1016/S0960-9822(01)00371-2.
    • (2001) Curr Biol , vol.11 , Issue.15 , pp. 1207-1214
    • Chekanova, J.A.1    Shaw, R.J.2    Belostotsky, D.A.3
  • 81
    • 0038487811 scopus 로고    scopus 로고
    • Poly (A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression
    • Mangus DA, Evans MC, Jacobson A: Poly (A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression. Genome Biol 2003,4(7):223. 10.1186/gb-2003-4-7-223.
    • (2003) Genome Biol , vol.4 , Issue.7 , pp. 223
    • Mangus, D.A.1    Evans, M.C.2    Jacobson, A.3
  • 82
    • 60149091189 scopus 로고    scopus 로고
    • Regulation of translation initiation in eukaryotes: mechanisms and biological targets
    • Sonenberg N, Hinnebusch AG: Regulation of translation initiation in eukaryotes: mechanisms and biological targets. Cell 2009,136(4):731-745. 10.1016/j.cell.2009.01.042.
    • (2009) Cell , vol.136 , Issue.4 , pp. 731-745
    • Sonenberg, N.1    Hinnebusch, A.G.2
  • 83
    • 75149196287 scopus 로고    scopus 로고
    • The mechanism of eukaryotic translation initiation and principles of its regulation
    • Jackson RJ, Hellen CUT, Pestova TV: The mechanism of eukaryotic translation initiation and principles of its regulation. Nat Rev Mol Cell Biol 2010,11(2):113-127. 10.1038/nrm2838.
    • (2010) Nat Rev Mol Cell Biol , vol.11 , Issue.2 , pp. 113-127
    • Jackson, R.J.1    Hellen, C.U.T.2    Pestova, T.V.3
  • 85
    • 2442607654 scopus 로고    scopus 로고
    • Molecular cloning of low-temperature-inducible ribosomal proteins from soybean
    • Kim KY, Park SW, Chung YS, Chung CH, Kim JI, Lee JH: Molecular cloning of low-temperature-inducible ribosomal proteins from soybean. J Exp Bot 2004,55(399):1153-1155. 10.1093/jxb/erh125.
    • (2004) J Exp Bot , vol.55 , Issue.399 , pp. 1153-1155
    • Kim, K.Y.1    Park, S.W.2    Chung, Y.S.3    Chung, C.H.4    Kim, J.I.5    Lee, J.H.6
  • 86
    • 69449093950 scopus 로고    scopus 로고
    • A role for the ribosome in development
    • Byrne ME: A role for the ribosome in development. Trends Plant Sci 2009,14(9):512-519. 10.1016/j.tplants.2009.06.009.
    • (2009) Trends Plant Sci , vol.14 , Issue.9 , pp. 512-519
    • Byrne, M.E.1
  • 88
    • 0036849261 scopus 로고    scopus 로고
    • Aminoacyl-tRNA synthetases: versatile players in the changing theater of translation
    • Francklyn C, Perona JJ, Puetz J, Hou Y-M: Aminoacyl-tRNA synthetases: versatile players in the changing theater of translation. RNA 2002,8(11):1363-1372. 10.1017/S1355838202021180.
    • (2002) RNA , vol.8 , Issue.11 , pp. 1363-1372
    • Francklyn, C.1    Perona, J.J.2    Puetz, J.3    Hou, Y.-M.4
  • 89
    • 33644842895 scopus 로고    scopus 로고
    • Requirement of aminoacyl-tRNA synthetases for gametogenesis and embryo development in Arabidopsis
    • Berg M, Rogers R, Muralla R, Meinke D: Requirement of aminoacyl-tRNA synthetases for gametogenesis and embryo development in Arabidopsis. Plant J 2005,44(5):866-878. 10.1111/j.1365-313X.2005.02580.x.
    • (2005) Plant J , vol.44 , Issue.5 , pp. 866-878
    • Berg, M.1    Rogers, R.2    Muralla, R.3    Meinke, D.4
  • 90
    • 77649268964 scopus 로고    scopus 로고
    • Bacterial translation elongation factor EF-Tu interacts and colocalizes with actin-like MreB protein
    • Defeu Soufo HJ, Reimold C, Linne U, Knust T, Gescher J, Graumann PL: Bacterial translation elongation factor EF-Tu interacts and colocalizes with actin-like MreB protein. Proc Natl Acad Sci U S A 2010,107(7):3163-3168. 10.1073/pnas.0911979107.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , Issue.7 , pp. 3163-3168
    • Defeu Soufo, H.J.1    Reimold, C.2    Linne, U.3    Knust, T.4    Gescher, J.5    Graumann, P.L.6
  • 91
    • 0030978096 scopus 로고    scopus 로고
    • Polypeptide chain release factors
    • Buckingham RH, Grentzmann G, Kisselev L: Polypeptide chain release factors. Mol Microbiol 1997,24(3):449-456. 10.1046/j.1365-2958.1997.3711734.x.
    • (1997) Mol Microbiol , vol.24 , Issue.3 , pp. 449-456
    • Buckingham, R.H.1    Grentzmann, G.2    Kisselev, L.3
  • 92
    • 0036081355 scopus 로고    scopus 로고
    • Gene expression omnibus: NCBI gene expression and hybridization array data repository
    • Edgar R, Domrachev M, Lash AE: Gene expression omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res 2002,30(1):207-210. 10.1093/nar/30.1.207.
    • (2002) Nucleic Acids Res , vol.30 , Issue.1 , pp. 207-210
    • Edgar, R.1    Domrachev, M.2    Lash, A.E.3


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