Genome sequence of Klebsiella pneumoniae Ecl8, a reference strain for targeted genetic manipulation

Genome Announcements

Volumn 1, Issue 1, 2013, Pages

  Fookes, Maria ^a   Yu, Jing ^b   De Majumdar, Shyamasree ^b   Thomson, Nicholas ^a   Schneiders, Thamarai ^b  

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^b QUEEN'S UNIVERSITY BELFAST   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84923838566     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00027-12     Document Type: Article

References (11)

1. Podschun R, Ullmann U. 1998. Klebsiella spp. as nosocomial pathogens: epidemiology, taxonomy, typing methods, and pathogenicity factors. Clin. Microbiol. Rev. 11:589-603.
2. Podschun R, Pietsch S, Höller C, Ullmann U. 2001. Incidence of Klebsiella species in surface waters and their expression of virulence factors. Appl. Environ. Microbiol. 67:3325-3327.
3. Ho J, Tambyah PA, Paterson DL. 2010. Multiresistant gram-negative infections: a global perspective. Curr. Opin. Infect. Dis. 23:546-553.
4. Forage RG, Lin EC. 1982. DHA system mediating aerobic and anaerobic dissimilation of glycerol in Klebsiella pneumoniae NCIB 418. J. Bacteriol. 151:591-599.
5. Rosenblum R, Khan E, Gonzalez G, Hasan R, Schneiders T. 2011. Genetic regulation of the ramA locus and its expression in clinical isolates of Klebsiella pneumoniae. Int. J. Antimicrob. Agents 38:39-45.
6. Veleba M, Higgins PG, Gonzalez G, Seifert H, Schneiders T. 2012. Characterization of RarA, a novel AraC family multidrug resistance regulator in Klebsiella pneumoniae. Antimicrob. Agents Chemother. 56:4450-4458.
7. Merlin C, McAteer S, Masters M. 2002. Tools for characterization of Escherichia coli genes of unknown function. J. Bacteriol. 184:4573-4581.
8. Tsai IJ, Otto TD, Berriman M. 2010. Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps. Genome Biol. 11:R41.
9. Otto TD, Sanders M, Berriman M, Newbold C. 2010. Iterative correction of reference nucleotides (iCORN) using second generation sequencing technology. Bioinformatics 26:1704-1707.
10. Harris SR, Feil EJ, Holden MT, Quail MA, Nickerson EK, Chantratita N, Gardete S, Tavares A, Day N, Lindsay JA, Edgeworth JD, de Lencastre H, Parkhill J, Peacock SJ, Bentley SD. 2010. Evolution of MRSA during hospital transmission and intercontinental spread. Science 327(5964):469-474.
11. Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, Ali J, Birren B, Bruce DC, Buhay C, Cole JR, Ding Y, Dugan S, Field D, Garrity GM, Gibbs R, Graves T, Han CS, Harrison SH, highlander S, Hugenholtz P, Khouri HM, Kodira CD, Kolker E, Kyrpides NC, Lang D, Lapidus A, Malfatti SA, Markowitz V, Metha T, Nelson KE, Parkhill J, Pitluck S, Qin X, Read TD, Schmutz J, Sozhamannan S, Sterk P, Strausberg RL, Sutton G, Thomson NR, Tiedje JM, Weinstock G, Wollam A, Detter JC. 2009. Genomics. Genome project standards in a new era of sequencing. Science 326:236-237.