-
1
-
-
0028915024
-
The use of general primers GP5 and GP6 elongated at their 3′ ends with adjacent highly conserved sequences improves human papillomavirus detection by PCR
-
de Roda Husman AM, Walboomers JM, van den Brule AJ, Meijer CJ, Snijders PJ (1995) The use of general primers GP5 and GP6 elongated at their 3′ ends with adjacent highly conserved sequences improves human papillomavirus detection by PCR. J Gen Virol 76:1057–1062
-
(1995)
J Gen Virol
, vol.76
, pp. 1057-1062
-
-
De Roda Husman, A.M.1
Walboomers, J.M.2
Van Den Brule, A.J.3
Meijer, C.J.4
Snijders, P.J.5
-
2
-
-
0033971125
-
Improved amplification of genital human papillomaviruses
-
Gravitt PE, Peyton CL, Alessi TQ, Wheeler CM, Coutlée F, Hildesheim A, Schiffman MH, Scott DR, Apple RJ (2000) Improved amplification of genital human papillomaviruses. J Clin Microbiol 38:357–361
-
(2000)
J Clin Microbiol
, vol.38
, pp. 357-361
-
-
Gravitt, P.E.1
Peyton, C.L.2
Alessi, T.Q.3
Wheeler, C.M.4
Coutlée, F.5
Hildesheim, A.6
Schiffman, M.H.7
Scott, D.R.8
Apple, R.J.9
-
3
-
-
0023770878
-
A sensitive method for the identification of uncharacterized viruses related to known virus groups: Hepadnavirus model system
-
Mack DH, Sninsky JJ (1988) A sensitive method for the identification of uncharacterized viruses related to known virus groups: hepadnavirus model system. Proc Natl Acad Sci U S A 85:6977–6981
-
(1988)
Proc Natl Acad Sci U S A
, vol.85
, pp. 6977-6981
-
-
Mack, D.H.1
Sninsky, J.J.2
-
4
-
-
36048959789
-
An iterative method for selecting degenerate multiplex PCR primers
-
Souvenir R, Buhler J, Stormo G, Zhang W (2007) An iterative method for selecting degenerate multiplex PCR primers. Methods Mol Biol 402:245–268
-
(2007)
Methods Mol Biol
, vol.402
, pp. 245-268
-
-
Souvenir, R.1
Buhler, J.2
Stormo, G.3
Zhang, W.4
-
5
-
-
0042674405
-
Human papillomavirus testing methods
-
Hubbard RA (2003) Human papillomavirus testing methods. Arch Pathol Lab Med 127:940–945
-
(2003)
Arch Pathol Lab Med
, vol.127
, pp. 940-945
-
-
Hubbard, R.A.1
-
6
-
-
0037046283
-
Diversity of CTX-M β-lactamases and their promoter regions from Enterobacteriaceae isolated in three Parisian hospitals
-
Saladin M, Cao VT, Lambert T, Donay J-L, Herrmann J-L, Ould-Hocine Z, Verdet C, Delisle F, Philippon A, Arlet G (2002) Diversity of CTX-M β-lactamases and their promoter regions from Enterobacteriaceae isolated in three Parisian hospitals. FEMS Microbiol Lett 209:161–168
-
(2002)
FEMS Microbiol Lett
, vol.209
, pp. 161-168
-
-
Saladin, M.1
Cao, V.T.2
Lambert, T.3
Donay, J.-L.4
Herrmann, J.-L.5
Ould-Hocine, Z.6
Verdet, C.7
Delisle, F.8
Philippon, A.9
Arlet, G.10
-
7
-
-
33745125651
-
A single tube RT-PCR assay for the detection of mosquitoborne flaviviruses
-
Ayers M, Adachi D, Johnson G, Andonova M, Drebot M, Tellier R (2006) A single tube RT-PCR assay for the detection of mosquitoborne flaviviruses. J Virol Methods 135: 235–239
-
(2006)
J Virol Methods
, vol.135
, pp. 235-239
-
-
Ayers, M.1
Adachi, D.2
Johnson, G.3
Onova, M.4
Drebot, M.5
Tellier, R.6
-
9
-
-
1242296843
-
Linear-after-the-exponential (LATE)- PCR: An advanced method of asymmetric PCR and its uses in quantitative real-time analysis
-
Sanchez JA, Pierce KE, Rice JE, Wangh LJ (2004) Linear-after-the-exponential (LATE)- PCR: an advanced method of asymmetric PCR and its uses in quantitative real-time analysis. Proc Natl Acad Sci U S A 101:1933–1938
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 1933-1938
-
-
Sanchez, J.A.1
Pierce, K.E.2
Rice, J.E.3
Wangh, L.J.4
-
10
-
-
20844433243
-
Linear-after-the-exponential (LATE)- PCR: Optimizing primer design for high yields of specific single-stranded DNA and improved real-time detection
-
Pierce KE, Sanchez JA, Rice JE, Wangh LJ (2005) Linear-after-the-exponential (LATE)- PCR: optimizing primer design for high yields of specific single-stranded DNA and improved real-time detection. Proc Natl Acad Sci U S A 102:8609–8614
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 8609-8614
-
-
Pierce, K.E.1
Sanchez, J.A.2
Rice, J.E.3
Wangh, L.J.4
-
11
-
-
38449116138
-
Monoplex/ multiplex linear-after-the-exponential-PCR assays combined with PrimeSafe and Dilute- 'N'-Go sequencing
-
Rice JE, Sanchez JA, Pierce KE, Reis AH Jr, Osborne A, Wangh LJ (2007) Monoplex/ multiplex linear-after-the-exponential-PCR assays combined with PrimeSafe and Dilute- 'N'-Go sequencing. Nat Protoc 2:2429–2438
-
(2007)
Nat Protoc
, vol.2
, pp. 2429-2438
-
-
Rice, J.E.1
Sanchez, J.A.2
Pierce, K.E.3
Reis, A.H.4
Osborne, A.5
Wangh, L.J.6
-
12
-
-
84870615490
-
Fluorescent signatures for variable DNA sequences
-
Rice JE, Reis AH Jr, Rice LM, Carver-Brown RK, Wangh LJ (2012) Fluorescent signatures for variable DNA sequences. Nucleic Acids Res 40:e164
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Rice, J.E.1
Reis, A.H.2
Rice, L.M.3
Carver-Brown, R.K.4
Wangh, L.J.5
-
13
-
-
84867830461
-
Rapid detection of sequence variation in Clostridium difficile genes using LATE-PCR with multiple mismatch- tolerant hybridization probes
-
Pierce KE, Khan H, Mistry R, Goldenberg SD, French GL, Wangh LJ (2012) Rapid detection of sequence variation in Clostridium difficile genes using LATE-PCR with multiple mismatch- tolerant hybridization probes. J Microbiol Methods 91:269–275
-
(2012)
J Microbiol Methods
, vol.91
, pp. 269-275
-
-
Pierce, K.E.1
Khan, H.2
Mistry, R.3
Goldenberg, S.D.4
French, G.L.5
Wangh, L.J.6
-
14
-
-
84876503276
-
Rapid detection of TEM-type extended-spectrum β-lactamase (ESBL) mutations using lightson/ lights-off probes with single-stranded DNA amplification
-
Pierce KE, Peter H, Bachmann TT, Volpe C, Mistry R, Rice JE, Wangh LJ (2013) Rapid detection of TEM-type extended-spectrum β-lactamase (ESBL) mutations using lightson/ lights-off probes with single-stranded DNA amplification. J Mol Diagn 15:291–298
-
(2013)
J Mol Diagn
, vol.15
, pp. 291-298
-
-
Pierce, K.E.1
Peter, H.2
Bachmann, T.T.3
Volpe, C.4
Mistry, R.5
Rice, J.E.6
Wangh, L.J.7
-
15
-
-
0347362476
-
Growing group of extendedspectrum β-lactamases: The CTX-M enzymes
-
Bonnet R (2004) Growing group of extendedspectrum β-lactamases: the CTX-M enzymes. Antimicrob Agents Chemother 48:1–14
-
(2004)
Antimicrob Agents Chemother
, vol.48
, pp. 1-14
-
-
Bonnet, R.1
-
16
-
-
0030875847
-
Thermodynamics and NMR of internal G·T mismatches in DNA
-
Allawi HT, SantaLucia J (1997) Thermodynamics and NMR of internal G·T mismatches in DNA. Biochemistry 36:10581–10594
-
(1997)
Biochemistry
, vol.36
, pp. 10581-10594
-
-
Allawi, H.T.1
Santalucia, J.2
-
17
-
-
0032539693
-
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest- neighbor thermodynamics
-
SantaLucia J (1998) A unified view of polymer, dumbbell, and oligonucleotide DNA nearest- neighbor thermodynamics. Proc Natl Acad Sci U S A 95:1460–1465
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 1460-1465
-
-
Santalucia, J.1
-
18
-
-
0031432735
-
Predicting sequence-dependent melting stability of short duplex DNA oligomers
-
Owczarzy R, Vallone PM, Gallo FJ, Paner TM, Lane MJ, Benight AS (1998) Predicting sequence-dependent melting stability of short duplex DNA oligomers. Biopolymers 44: 217–239
-
(1998)
Biopolymers
, vol.44
, pp. 217-239
-
-
Owczarzy, R.1
Vallone, P.M.2
Gallo, F.J.3
Paner, T.M.4
Lane, M.J.5
Benight, A.S.6
-
19
-
-
77953562685
-
Design and optimization of a novel reverse transcription linear-after-the- exponential PCR for the detection of foot-and- mouth disease virus
-
Pierce KE, Mistry R, Reid SM, Bharya S, Dukes JP, Hartshorn C, King DP, Wangh LJ (2010) Design and optimization of a novel reverse transcription linear-after-the- exponential PCR for the detection of foot-and- mouth disease virus. J Appl Microbiol 109:180–189
-
(2010)
J Appl Microbiol
, vol.109
, pp. 180-189
-
-
Pierce, K.E.1
Mistry, R.2
Reid, S.M.3
Bharya, S.4
Dukes, J.P.5
Hartshorn, C.6
King, D.P.7
Wangh, L.J.8
-
20
-
-
77956063833
-
Pan-serotypic detection of foot-andmouth disease virus by RT linear-after-theexponential PCR
-
Reid SM, Pierce KE, Mistry R, Bharya S, Dukes JP, Volpe C, Wangh LJ, King DP (2010) Pan-serotypic detection of foot-andmouth disease virus by RT linear-after-theexponential PCR. Mol Cell Probes 24: 250–255
-
(2010)
Mol Cell Probes
, vol.24
, pp. 250-255
-
-
Reid, S.M.1
Pierce, K.E.2
Mistry, R.3
Bharya, S.4
Dukes, J.P.5
Volpe, C.6
Wangh, L.J.7
King, D.P.8
-
21
-
-
77957306871
-
Polymerization behavior of Klenow fragment and Taq DNA polymerase in short primer extension reactions
-
Zhao G, Guan Y (2010) Polymerization behavior of Klenow fragment and Taq DNA polymerase in short primer extension reactions. Acta Biochim Biophys Sin 42:722–728
-
(2010)
Acta Biochim Biophys Sin
, vol.42
, pp. 722-728
-
-
Zhao, G.1
Guan, Y.2
-
22
-
-
84883700420
-
Rapid detection and identification of Hepatitis C Virus sequences using a molecular assay with mismatch- tolerant hybridization probes: A general method for analysis of sequence variation
-
Pierce KE, Wangh LJ (2013) Rapid detection and identification of Hepatitis C Virus sequences using a molecular assay with mismatch- tolerant hybridization probes: a general method for analysis of sequence variation. Biotechniques 55(3):125–132
-
(2013)
Biotechniques
, vol.55
, Issue.3
, pp. 125-132
-
-
Pierce, K.E.1
Wangh, L.J.2
-
23
-
-
0002659517
-
Methods for obtaining thermodynamic data on oligonucleotide transitions
-
In: Hinz H, Springer, New York
-
Breslauer KJ (1986) Methods for obtaining thermodynamic data on oligonucleotide transitions. In: Hinz H (ed) Thermodynamic data for biochemistry and biotechnology. Springer, New York, pp 402–427
-
(1986)
Thermodynamic Data for Biochemistry and Biotechnology
, pp. 402-427
-
-
Breslauer, K.J.1
-
24
-
-
84865022311
-
Primer3 – new capabilities and interfaces
-
Untergasser A, Cutcutache I, Koressaar T, Ye J, Faircloth BC, Remm M, Rozen SG (2012) Primer3 – new capabilities and interfaces. Nucleic Acids Res 40:e115
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Untergasser, A.1
Cutcutache, I.2
Koressaar, T.3
Ye, J.4
Faircloth, B.C.5
Remm, M.6
Rozen, S.G.7
-
25
-
-
0036835759
-
Efficiencies of fluorescence resonance energy transfer and contact-mediated quenching in oligonucleotide probes
-
Marras SA, Kramer FR, Tyagi S (2002) Efficiencies of fluorescence resonance energy transfer and contact-mediated quenching in oligonucleotide probes. Nucleic Acids Res 30:e122
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Marras, S.A.1
Kramer, F.R.2
Tyagi, S.3
|