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Volumn 167, Issue 3, 2015, Pages 905-914

Methyl-CpG-binding domain protein MBD7 is required for active DNA demethylation in arabidopsis

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; CAULIFLOWER MOSAIC VIRUS;

EID: 84923650135     PISSN: 00320889     EISSN: 15322548     Source Type: Journal    
DOI: 10.1104/pp.114.252106     Document Type: Article
Times cited : (45)

References (37)
  • 1
    • 0035878120 scopus 로고    scopus 로고
    • Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene
    • Bartee L, Malagnac F, Bender J (2001) Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene. Genes Dev 15: 1753-1758.
    • (2001) Genes Dev , vol.15 , pp. 1753-1758
    • Bartee, L.1    Malagnac, F.2    Bender, J.3
  • 2
    • 84861497961 scopus 로고    scopus 로고
    • RNA-directed DNA methylation: Getting a grip on mechanism
    • Bender J (2012) RNA-directed DNA methylation: getting a grip on mechanism. Curr Biol 22: R400-R401.
    • (2012) Curr Biol , vol.22 , pp. R400-R401
    • Bender, J.1
  • 4
    • 0037046810 scopus 로고    scopus 로고
    • Role of the Arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing
    • Cao X, Jacobsen SE (2002) Role of the Arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr Biol 12: 1138- 1144.
    • (2002) Curr Biol , vol.12 , pp. 1138-1144
    • Cao, X.1    Jacobsen, S.E.2
  • 5
    • 38949147924 scopus 로고    scopus 로고
    • Firefly luciferase complementation imaging assay for protein-protein interactions in plants
    • Chen H, Zou Y, Shang Y, Lin H, Wang Y, Cai R, Tang X, Zhou JM (2008) Firefly luciferase complementation imaging assay for protein-protein interactions in plants. Plant Physiol 146: 368-376.
    • (2008) Plant Physiol , vol.146 , pp. 368-376
    • Chen, H.1    Zou, Y.2    Shang, Y.3    Lin, H.4    Wang, Y.5    Cai, R.6    Tang, X.7    Zhou, J.M.8
  • 6
    • 77957151956 scopus 로고    scopus 로고
    • SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
    • Cox MP, Peterson DA, Biggs PJ (2010) SolexaQA: at-a-glance quality assessment of Illumina second-generation sequencing data. BMC Bioinformatics 11: 485.
    • (2010) BMC Bioinformatics , vol.11 , pp. 485
    • Cox, M.P.1    Peterson, D.A.2    Biggs, P.J.3
  • 7
    • 84864301890 scopus 로고    scopus 로고
    • The role of methylbinding proteins in chromatin organization and epigenome maintenance
    • Fournier A, Sasai N, Nakao M, Defossez PA (2012) The role of methylbinding proteins in chromatin organization and epigenome maintenance. Brief Funct Genomics 11: 251-264.
    • (2012) Brief Funct Genomics , vol.11 , pp. 251-264
    • Fournier, A.1    Sasai, N.2    Nakao, M.3    Defossez, P.A.4
  • 9
    • 0037074009 scopus 로고    scopus 로고
    • ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase
    • Gong Z, Morales-Ruiz T, Ariza RR, Roldán-Arjona T, David L, Zhu JK (2002) ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase. Cell 111: 803-814.
    • (2002) Cell , vol.111 , pp. 803-814
    • Gong, Z.1    Morales-Ruiz, T.2    Ariza, R.R.3    Roldán-Arjona, T.4    David, L.5    Zhu, J.K.6
  • 10
    • 84860388901 scopus 로고    scopus 로고
    • Active DNA demethylation by oxidation and repair
    • Gong Z, Zhu JK (2011) Active DNA demethylation by oxidation and repair. Cell Res 21: 1649-1651.
    • (2011) Cell Res , vol.21 , pp. 1649-1651
    • Gong, Z.1    Zhu, J.K.2
  • 11
    • 79960716754 scopus 로고    scopus 로고
    • Multisubunit RNA polymerases IV and V: Purveyors of non-coding RNA for plant gene silencing
    • Haag JR, Pikaard CS (2011) Multisubunit RNA polymerases IV and V: purveyors of non-coding RNA for plant gene silencing. Nat Rev Mol Cell Biol 12: 483-492.
    • (2011) Nat Rev Mol Cell Biol , vol.12 , pp. 483-492
    • Haag, J.R.1    Pikaard, C.S.2
  • 12
    • 79952535972 scopus 로고    scopus 로고
    • Regulation and function of DNA methylation in plants and animals
    • He XJ, Chen T, Zhu JK (2011) Regulation and function of DNA methylation in plants and animals. Cell Res 21: 442-465.
    • (2011) Cell Res , vol.21 , pp. 442-465
    • He, X.J.1    Chen, T.2    Zhu, J.K.3
  • 13
    • 59949097829 scopus 로고    scopus 로고
    • NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation
    • He XJ, Hsu YF, Pontes O, Zhu J, Lu J, Bressan RA, Pikaard C, Wang CS, Zhu JK (2009) NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation. Genes Dev 23: 318-330.
    • (2009) Genes Dev , vol.23 , pp. 318-330
    • He, X.J.1    Hsu, Y.F.2    Pontes, O.3    Zhu, J.4    Lu, J.5    Bressan, R.A.6    Pikaard, C.7    Wang, C.S.8    Zhu, J.K.9
  • 14
    • 79957868920 scopus 로고    scopus 로고
    • Bismark: A flexible aligner and methylation caller for Bisulfite-Seq applications
    • Krueger F, Andrews SR (2011) Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications. Bioinformatics 27: 1571-1572.
    • (2011) Bioinformatics , vol.27 , pp. 1571-1572
    • Krueger, F.1    Andrews, S.R.2
  • 15
    • 62849098006 scopus 로고    scopus 로고
    • Molecular biology: Dynamic DNA methylation
    • Law JA, Jacobsen SE (2009) Molecular biology: dynamic DNA methylation. Science 323: 1568-1569.
    • (2009) Science , vol.323 , pp. 1568-1569
    • Law, J.A.1    Jacobsen, S.E.2
  • 16
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law JA, Jacobsen SE (2010) Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11: 204-220.
    • (2010) Nat Rev Genet , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 17
    • 84863980221 scopus 로고    scopus 로고
    • Antisilencing role of the RNA-directed DNA methylation pathway and a histone acetyltransferase in Arabidopsis
    • Li X, Qian W, Zhao Y, Wang C, Shen J, Zhu JK, Gong Z (2012) Antisilencing role of the RNA-directed DNA methylation pathway and a histone acetyltransferase in Arabidopsis. Proc Natl Acad Sci USA 109: 11425-11430.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 11425-11430
    • Li, X.1    Qian, W.2    Zhao, Y.3    Wang, C.4    Shen, J.5    Zhu, J.K.6    Gong, Z.7
  • 19
    • 77956798477 scopus 로고    scopus 로고
    • DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis
    • Liu Q, Wang J, Miki D, Xia R, Yu W, He J, Zheng Z, Zhu JK, Gong Z (2010) DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis. Plant Cell 22: 2336-2352.
    • (2010) Plant Cell , vol.22 , pp. 2336-2352
    • Liu, Q.1    Wang, J.2    Miki, D.3    Xia, R.4    Yu, W.5    He, J.6    Zheng, Z.7    Zhu, J.K.8    Gong, Z.9
  • 22
    • 10644237968 scopus 로고    scopus 로고
    • RNAi-mediated pathways in the nucleus
    • Matzke MA, Birchler JA (2005) RNAi-mediated pathways in the nucleus. Nat Rev Genet 6: 24-35.
    • (2005) Nat Rev Genet , vol.6 , pp. 24-35
    • Matzke, M.A.1    Birchler, J.A.2
  • 23
    • 46249125864 scopus 로고    scopus 로고
    • Arabidopsis DEMETER-LIKE proteins DML2 and DML3 are required for appropriate distribution of DNA methylation marks
    • Ortega-Galisteo AP, Morales-Ruiz T, Ariza RR, Roldán-Arjona T (2008) Arabidopsis DEMETER-LIKE proteins DML2 and DML3 are required for appropriate distribution of DNA methylation marks. Plant Mol Biol 67: 671-681.
    • (2008) Plant Mol Biol , vol.67 , pp. 671-681
    • Ortega-Galisteo, A.P.1    Morales-Ruiz, T.2    Ariza, R.R.3    Roldán-Arjona, T.4
  • 24
    • 84906101577 scopus 로고    scopus 로고
    • Regulation of active DNA demethylation by an α-crystallin domain protein in Arabidopsis
    • Qian W, Miki D, Lei M, Zhu X, Zhang H, Liu Y, Li Y, Lang Z, Wang J, Tang K, et al (2014) Regulation of active DNA demethylation by an α-crystallin domain protein in Arabidopsis. Mol Cell 55: 361-371.
    • (2014) Mol Cell , vol.55 , pp. 361-371
    • Qian, W.1    Miki, D.2    Lei, M.3    Zhu, X.4    Zhang, H.5    Liu, Y.6    Li, Y.7    Lang, Z.8    Wang, J.9    Tang, K.10
  • 25
  • 26
    • 44949085661 scopus 로고    scopus 로고
    • An efficient chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in Arabidopsis plants
    • Saleh A, Alvarez-Venegas R, Avramova Z (2008) An efficient chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in Arabidopsis plants. Nat Protoc 3: 1018-1025.
    • (2008) Nat Protoc , vol.3 , pp. 1018-1025
    • Saleh, A.1    Alvarez-Venegas, R.2    Avramova, Z.3
  • 27
    • 35148851963 scopus 로고    scopus 로고
    • PRMT11: A new Arabidopsis MBD7 protein partner with arginine methyltransferase activity
    • Scebba F, De Bastiani M, Bernacchia G, Andreucci A, Galli A, Pitto L (2007) PRMT11: a new Arabidopsis MBD7 protein partner with arginine methyltransferase activity. Plant J 52: 210-222.
    • (2007) Plant J , vol.52 , pp. 210-222
    • Scebba, F.1    De Bastiani, M.2    Bernacchia, G.3    Andreucci, A.4    Galli, A.5    Pitto, L.6
  • 29
    • 33645730627 scopus 로고    scopus 로고
    • ROR1/RPA2A, a putative replication protein A2, functions in epigenetic gene silencing and in regulation of meristem development in Arabidopsis
    • Xia R, Wang J, Liu C,Wang Y,Wang Y, Zhai J, Liu J, Hong X, Cao X, Zhu JK, et al (2006) ROR1/RPA2A, a putative replication protein A2, functions in epigenetic gene silencing and in regulation of meristem development in Arabidopsis. Plant Cell 18: 85-103.
    • (2006) Plant Cell , vol.18 , pp. 85-103
    • Xia, R.1    Wang, J.2    Liu, C.3    Wang, Y.4    Wang, Y.5    Zhai, J.6    Liu, J.7    Hong, X.8    Cao, X.9    Zhu, J.K.10
  • 30
    • 43749094325 scopus 로고    scopus 로고
    • The three methyl-CpG-binding domains of AtMBD7 control its subnuclear localization and mobility
    • Zemach A, Gaspan O, Grafi G (2008) The three methyl-CpG-binding domains of AtMBD7 control its subnuclear localization and mobility. J Biol Chem 283: 8406-8411.
    • (2008) J Biol Chem , vol.283 , pp. 8406-8411
    • Zemach, A.1    Gaspan, O.2    Grafi, G.3
  • 31
    • 0038129767 scopus 로고    scopus 로고
    • Characterization of Arabidopsis thaliana methyl- CpG-binding domain (MBD) proteins
    • Zemach A, Grafi G (2003) Characterization of Arabidopsis thaliana methyl- CpG-binding domain (MBD) proteins. Plant J 34: 565-572.
    • (2003) Plant J , vol.34 , pp. 565-572
    • Zemach, A.1    Grafi, G.2
  • 34
    • 70449533845 scopus 로고    scopus 로고
    • The C-terminal domain of the Arabidopsis AtMBD7 protein confers strong chromatin binding activity
    • Zemach A, Paul LK, Stambolsky P, Efroni I, Rotter V, Grafi G (2009) The C-terminal domain of the Arabidopsis AtMBD7 protein confers strong chromatin binding activity. Exp Cell Res 315: 3554-3562.
    • (2009) Exp Cell Res , vol.315 , pp. 3554-3562
    • Zemach, A.1    Paul, L.K.2    Stambolsky, P.3    Efroni, I.4    Rotter, V.5    Grafi, G.6
  • 35
    • 84904968487 scopus 로고    scopus 로고
    • REPRESSOR OF SILENCING5 encodes a member of the small heat shock protein family and is required for DNA demethylation in Arabidopsis
    • Zhao Y, Xie S, Li X, Wang C, Chen Z, Lai J, Gong Z (2014) REPRESSOR OF SILENCING5 encodes a member of the small heat shock protein family and is required for DNA demethylation in Arabidopsis. Plant Cell 26: 2660-2675.
    • (2014) Plant Cell , vol.26 , pp. 2660-2675
    • Zhao, Y.1    Xie, S.2    Li, X.3    Wang, C.4    Chen, Z.5    Lai, J.6    Gong, Z.7
  • 37
    • 73349104113 scopus 로고    scopus 로고
    • Active DNA demethylation mediated by DNA glycosylases
    • Zhu JK (2009) Active DNA demethylation mediated by DNA glycosylases. Annu Rev Genet 43: 143-166.
    • (2009) Annu Rev Genet , vol.43 , pp. 143-166
    • Zhu, J.K.1


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