메뉴 건너뛰기




Volumn 10, Issue 2, 2015, Pages

Importance of tissue preparation methods in FTIR micro-spectroscopical analysis of biological tissues: 'Traps for new users'

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL; CARBOHYDRATE; FORMALDEHYDE; NUCLEIC ACID; PROTEIN;

EID: 84923372160     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0116491     Document Type: Article
Times cited : (108)

References (38)
  • 1
    • 77953599053 scopus 로고    scopus 로고
    • Vibrational spectroscopic mapping and imaging of tissues and cells
    • Carter EA, Tam KK, Armstrong RS, Lay PA (2009) Vibrational spectroscopic mapping and imaging of tissues and cells. Biophys Rev 1: 95-103.
    • (2009) Biophys Rev , vol.1 , pp. 95-103
    • Carter, E.A.1    Tam, K.K.2    Armstrong, R.S.3    Lay, P.A.4
  • 2
    • 7244229617 scopus 로고    scopus 로고
    • A decade of vibrational microspectroscopy of human cells and tissue (1994-2004)
    • PMID: 15457314
    • Diem M, Romeo M, Boydston-White S, Miljkovic M, Matthaus C (2004) A decade of vibrational microspectroscopy of human cells and tissue (1994-2004). Analyst 129: 880-885. PMID: 15457314
    • (2004) Analyst , vol.129 , pp. 880-885
    • Diem, M.1    Romeo, M.2    Boydston-White, S.3    Miljkovic, M.4    Matthaus, C.5
  • 3
    • 84856729451 scopus 로고    scopus 로고
    • Preparation of tissues and cells for infrared and raman spectroscopy and imaging
    • Srinivasan G, editor New York: McGraw-Hill
    • Gazi E, Gardner P (2010) Preparation of tissues and cells for infrared and raman spectroscopy and imaging. In: Srinivasan G, editor. Vibrational Spectroscopic Imaging for Biomedical Applications. New York: McGraw-Hill. pp. 59-98.
    • (2010) Vibrational Spectroscopic Imaging for Biomedical Applications , pp. 59-98
    • Gazi, E.1    Gardner, P.2
  • 4
    • 57449090151 scopus 로고    scopus 로고
    • Shedding new light on the molecular architecture of oocytes using a combination of synchrotron Fourier transform-infrared and Raman spectroscopic mapping
    • PMID: 18983174
    • Wood BR, Chernenko T, Matthaus C, Diem M, Chong C, et al. (2008) Shedding new light on the molecular architecture of oocytes using a combination of synchrotron Fourier transform-infrared and Raman spectroscopic mapping. Anal Chem 80: 9065-9072. doi: 10.1021/ac8015483 PMID: 18983174
    • (2008) Anal Chem , vol.80 , pp. 9065-9072
    • Wood, B.R.1    Chernenko, T.2    Matthaus, C.3    Diem, M.4    Chong, C.5
  • 5
    • 1842582517 scopus 로고    scopus 로고
    • Fourier transform infrared (FTIR) spectral mapping of the cervical transformation zone, and dysplastic squamous epithelium
    • PMID: 15047215
    • Wood BR, Chiriboga L, Yee H, Quinn MA, McNaughton D, et al. (2004) Fourier transform infrared (FTIR) spectral mapping of the cervical transformation zone, and dysplastic squamous epithelium. Gynecol Oncol 93: 59-68. PMID: 15047215
    • (2004) Gynecol Oncol , vol.93 , pp. 59-68
    • Wood, B.R.1    Chiriboga, L.2    Yee, H.3    Quinn, M.A.4    McNaughton, D.5
  • 7
    • 10044267938 scopus 로고    scopus 로고
    • Inflammatory bowel diseases as an intermediate stage between normal and cancer: A FTIR-microspectroscopy approach
    • PMID: 15457432
    • Argov S, Sahu RK, Bernshtain E, Salman A, Shohat G, et al. (2004) Inflammatory bowel diseases as an intermediate stage between normal and cancer: a FTIR-microspectroscopy approach. Biopolymers 75: 384-392. PMID: 15457432
    • (2004) Biopolymers , vol.75 , pp. 384-392
    • Argov, S.1    Sahu, R.K.2    Bernshtain, E.3    Salman, A.4    Shohat, G.5
  • 8
    • 33747367732 scopus 로고    scopus 로고
    • In-vitro analysis of normal and aneurismal human ascending aortic tissues using FT-IR microspectroscopy
    • PMID: 16904629
    • Bonnier F, Rubin S, Venteo L, Krishna CM, Pluot M, et al. (2006) In-vitro analysis of normal and aneurismal human ascending aortic tissues using FT-IR microspectroscopy. Biochim Biophys Acta 1758: 968-973. PMID: 16904629
    • (2006) Biochim Biophys Acta , vol.1758 , pp. 968-973
    • Bonnier, F.1    Rubin, S.2    Venteo, L.3    Krishna, C.M.4    Pluot, M.5
  • 9
    • 38949185324 scopus 로고    scopus 로고
    • Analysis of structural changes in normal and aneurismal human aortic tissues using FTIR microscopy
    • PMID: 17985368
    • Rubin S, Bonnier F, Sandt C, Venteo L, Pluot M, et al. (2008) Analysis of structural changes in normal and aneurismal human aortic tissues using FTIR microscopy. Biopolymers 89: 160-169. PMID: 17985368
    • (2008) Biopolymers , vol.89 , pp. 160-169
    • Rubin, S.1    Bonnier, F.2    Sandt, C.3    Venteo, L.4    Pluot, M.5
  • 10
    • 0035756951 scopus 로고    scopus 로고
    • FT-IR microscopic characterization of normal and malignant human colonic tissues
    • Online Pub
    • Salman A, Argov S, Ramesh J, Goldstein J, Sinelnikov I, et al. (2001) FT-IR microscopic characterization of normal and malignant human colonic tissues. Cell Mol Biol (Noisy-le-grand) 47 Online Pub: OL159-166.
    • (2001) Cell Mol Biol (Noisy-Le-Grand) , vol.47 , pp. OL159-OL166
    • Salman, A.1    Argov, S.2    Ramesh, J.3    Goldstein, J.4    Sinelnikov, I.5
  • 11
    • 84887927620 scopus 로고    scopus 로고
    • Synchrotron Fourier transform infrared (FTIR) analysis of single living cells progressing through the cell cycle
    • PMID: 23762893
    • Whelan DR, Bambery KR, Puskar L, McNaughton D, Wood BR (2013) Synchrotron Fourier transform infrared (FTIR) analysis of single living cells progressing through the cell cycle. The Analyst 138: 3891-3899. doi: 10.1039/c3an00316g PMID: 23762893
    • (2013) The Analyst , vol.138 , pp. 3891-3899
    • Whelan, D.R.1    Bambery, K.R.2    Puskar, L.3    McNaughton, D.4    Wood, B.R.5
  • 12
    • 4043166161 scopus 로고    scopus 로고
    • FTIR spectroscopy studies on the apoptosis-promoting effect of TFAR19 on the erythroleukemia cell line MEL
    • PMID: 15250154
    • Gu L, Xie L, Yao W, Ka W, Sun D, et al. (2004) FTIR spectroscopy studies on the apoptosis-promoting effect of TFAR19 on the erythroleukemia cell line MEL. Journal of biomedical engineering 21: 449-452. PMID: 15250154
    • (2004) Journal of Biomedical Engineering , vol.21 , pp. 449-452
    • Gu, L.1    Xie, L.2    Yao, W.3    Ka, W.4    Sun, D.5
  • 13
    • 0028796948 scopus 로고
    • Beware of connective tissue proteins: Assignment and implications of collagen absorptions in infrared spectra of human tissues
    • PMID: 7827129
    • Jackson M, Choo LP, Watson PH, Halliday WC, Mantsch HH (1995) Beware of connective tissue proteins: assignment and implications of collagen absorptions in infrared spectra of human tissues. Biochim Biophys Acta 1270: 1-6. PMID: 7827129
    • (1995) Biochim Biophys Acta , vol.1270 , pp. 1-6
    • Jackson, M.1    Choo, L.P.2    Watson, P.H.3    Halliday, W.C.4    Mantsch, H.H.5
  • 14
    • 0032586404 scopus 로고    scopus 로고
    • Vascular graft healing: I. FTIR analysis of an implant model for studying the healing of a vascular graft
    • PMID: 10331911
    • Lyman DJ, Murray-Wijelath J (1999) Vascular graft healing: I. FTIR analysis of an implant model for studying the healing of a vascular graft. J Biomed Mater Res 48: 172-186. PMID: 10331911
    • (1999) J Biomed Mater Res , vol.48 , pp. 172-186
    • Lyman, D.J.1    Murray-Wijelath, J.2
  • 15
    • 33746918322 scopus 로고    scopus 로고
    • Early alterations in myocardia and vessels of the diabetic rat heart: An FTIR microspectroscopic study
    • PMID: 16719841
    • Toyran N, Lasch P, Naumann D, Turan B, Severcan F (2006) Early alterations in myocardia and vessels of the diabetic rat heart: an FTIR microspectroscopic study. Biochem J 397: 427-436. PMID: 16719841
    • (2006) Biochem J , vol.397 , pp. 427-436
    • Toyran, N.1    Lasch, P.2    Naumann, D.3    Turan, B.4    Severcan, F.5
  • 16
    • 33846838855 scopus 로고    scopus 로고
    • Selenium alters the lipid content and protein profile of rat heart: An FTIR microspectroscopic study
    • PMID: 17240348
    • Toyran N, Turan B, Severcan F (2007) Selenium alters the lipid content and protein profile of rat heart: an FTIR microspectroscopic study. Arch Biochem Biophys 458: 184-193. PMID: 17240348
    • (2007) Arch Biochem Biophys , vol.458 , pp. 184-193
    • Toyran, N.1    Turan, B.2    Severcan, F.3
  • 18
    • 0035052861 scopus 로고    scopus 로고
    • Imaging of collagen and proteoglycan in cartilage sections using Fourier transform infrared spectral imaging
    • PMID: 11315924
    • Potter K, Kidder LH, Levin IW, Lewis EN, Spencer RG (2001) Imaging of collagen and proteoglycan in cartilage sections using Fourier transform infrared spectral imaging. Arthritis Rheum 44: 846-855. PMID: 11315924
    • (2001) Arthritis Rheum , vol.44 , pp. 846-855
    • Potter, K.1    Kidder, L.H.2    Levin, I.W.3    Lewis, E.N.4    Spencer, R.G.5
  • 19
    • 0037447862 scopus 로고    scopus 로고
    • Fourier transform infrared evaluation of microscopic scarring in the cardiomyopathic heart: Effect of chronic AT1 suppression
    • PMID: 12711345
    • Gough KM, Zelinski D, Wiens R, Rak M, Dixon IM (2003) Fourier transform infrared evaluation of microscopic scarring in the cardiomyopathic heart: effect of chronic AT1 suppression. Anal Biochem 316: 232-242. PMID: 12711345
    • (2003) Anal Biochem , vol.316 , pp. 232-242
    • Gough, K.M.1    Zelinski, D.2    Wiens, R.3    Rak, M.4    Dixon, I.M.5
  • 20
    • 0029981844 scopus 로고    scopus 로고
    • Modification of the extracellular matrix following myocardial infarction monitored by FTIR spectroscopy
    • PMID: 8608173
    • Liu K, Jackson M, Sowa MG, Ju H, Dixon IM, et al. (1996) Modification of the extracellular matrix following myocardial infarction monitored by FTIR spectroscopy. Biochim Biophys Acta 1315: 73-77. PMID: 8608173
    • (1996) Biochim Biophys Acta , vol.1315 , pp. 73-77
    • Liu, K.1    Jackson, M.2    Sowa, M.G.3    Ju, H.4    Dixon, I.M.5
  • 21
    • 0038487374 scopus 로고    scopus 로고
    • A library of IR bands of nucleic acids in solution
    • PMID: 12878315
    • Banyay M, Sarkar M, Graslund A (2003) A library of IR bands of nucleic acids in solution. Biophys Chem 104: 477-488. PMID: 12878315
    • (2003) Biophys Chem , vol.104 , pp. 477-488
    • Banyay, M.1    Sarkar, M.2    Graslund, A.3
  • 22
    • 67149099669 scopus 로고    scopus 로고
    • Impact of fixation on in vitro cell culture lines monitored with Raman spectroscopy
    • PMID: 19475142
    • Mariani MM, Lampen P, Popp J, Wood BR, Deckert V (2009) Impact of fixation on in vitro cell culture lines monitored with Raman spectroscopy. The Analyst 134: 1154-1161. doi: 10.1039/b822408k PMID: 19475142
    • (2009) The Analyst , vol.134 , pp. 1154-1161
    • Mariani, M.M.1    Lampen, P.2    Popp, J.3    Wood, B.R.4    Deckert, V.5
  • 23
    • 84867040715 scopus 로고    scopus 로고
    • Evaluating different fixation protocols for spectral cytopathology, part 2: Cultured cells
    • PMID: 22935013
    • Mazur AI, Marcsisin EJ, Bird B, Miljkovic M, Diem M (2012) Evaluating different fixation protocols for spectral cytopathology, part 2: cultured cells. Analytical chemistry 84: 8265-8271. doi: 10.1021/ac3017407 PMID: 22935013
    • (2012) Analytical Chemistry , vol.84 , pp. 8265-8271
    • Mazur, A.I.1    Marcsisin, E.J.2    Bird, B.3    Miljkovic, M.4    Diem, M.5
  • 24
    • 84856744323 scopus 로고    scopus 로고
    • Evaluating different fixation protocols for spectral cytopathology, part 1
    • PMID: 22103764
    • Mazur AI, Marcsisin EJ, Bird B, Miljkovic M, Diem M (2012) Evaluating different fixation protocols for spectral cytopathology, part 1. Analytical chemistry 84: 1259-1266. doi: 10.1021/ac202046d PMID: 22103764
    • (2012) Analytical Chemistry , vol.84 , pp. 1259-1266
    • Mazur, A.I.1    Marcsisin, E.J.2    Bird, B.3    Miljkovic, M.4    Diem, M.5
  • 25
    • 70349303076 scopus 로고    scopus 로고
    • Resonant Mie scattering in infrared spectroscopy of biological materials-understanding the 'dispersion artefact'
    • PMID: 20448924
    • Bassan P, Byrne HJ, Bonnier F, Lee J, Dumas P, et al. (2009) Resonant Mie scattering in infrared spectroscopy of biological materials-understanding the 'dispersion artefact'. The Analyst 134: 1586-1593. doi: 10.1039/b904808a PMID: 20448924
    • (2009) The Analyst , vol.134 , pp. 1586-1593
    • Bassan, P.1    Byrne, H.J.2    Bonnier, F.3    Lee, J.4    Dumas, P.5
  • 26
    • 76749118117 scopus 로고    scopus 로고
    • Resonant Mie scattering (RMieS) correction of infrared spectra from highly scattering biological samples
    • PMID: 20098758
    • Bassan P, Kohler A, Martens H, Lee J, Byrne HJ, et al. (2010) Resonant Mie scattering (RMieS) correction of infrared spectra from highly scattering biological samples. The Analyst 135: 268-277. doi: 10.1039/b921056c PMID: 20098758
    • (2010) The Analyst , vol.135 , pp. 268-277
    • Bassan, P.1    Kohler, A.2    Martens, H.3    Lee, J.4    Byrne, H.J.5
  • 27
    • 22144499621 scopus 로고    scopus 로고
    • A study examining the effects of tissue processing on human tissue sections using vibrational spectroscopy
    • Faolain EO, Hunter MB, Byrne JM, Kelehan P, McNamara M, et al. (2005) A study examining the effects of tissue processing on human tissue sections using vibrational spectroscopy. Vib Spectrosc 38: 121-127.
    • (2005) Vib Spectrosc , vol.38 , pp. 121-127
    • Faolain, E.O.1    Hunter, M.B.2    Byrne, J.M.3    Kelehan, P.4    McNamara, M.5
  • 28
    • 77951208981 scopus 로고    scopus 로고
    • Theoretical and experimental considerations for interpretation of amide I bands in tissue
    • Gough KM, Tzadu L, Kastyak M, Kuzyk A, Julian R (2010) Theoretical and experimental considerations for interpretation of amide I bands in tissue. Vib Spectrosc 53: 71-76.
    • (2010) Vib Spectrosc , vol.53 , pp. 71-76
    • Gough, K.M.1    Tzadu, L.2    Kastyak, M.3    Kuzyk, A.4    Julian, R.5
  • 29
    • 0025005940 scopus 로고
    • Secondary structure and dosage of soluble and membrane proteins by attenuated total reflection Fourier-transform infrared spectroscopy on hydrated films
    • PMID: 2226461
    • Goormaghtigh E, Cabiaux V, Ruysschaert JM (1990) Secondary structure and dosage of soluble and membrane proteins by attenuated total reflection Fourier-transform infrared spectroscopy on hydrated films. Eur J Biochem 193: 409-420. PMID: 2226461
    • (1990) Eur J Biochem , vol.193 , pp. 409-420
    • Goormaghtigh, E.1    Cabiaux, V.2    Ruysschaert, J.M.3
  • 30
    • 0027492164 scopus 로고
    • Determination of protein secondary structure by Fourier transform infrared spectroscopy: A critical assessment
    • PMID: 8422346
    • Surewicz WK, Mantsch HH, Chapman D (1993) Determination of protein secondary structure by Fourier transform infrared spectroscopy: A critical assessment. Biochemistry 32: 389-394. PMID: 8422346
    • (1993) Biochemistry , vol.32 , pp. 389-394
    • Surewicz, W.K.1    Mantsch, H.H.2    Chapman, D.3
  • 31
    • 0026726149 scopus 로고
    • An FT-IR microscopic investigation of the effects of tissue preservation on bone
    • PMID: 1393781
    • Pleshko NL, Boskey AL, Mendelsohn R (1992) An FT-IR microscopic investigation of the effects of tissue preservation on bone. Calcified tissue international 51: 72-77. PMID: 1393781
    • (1992) Calcified Tissue International , vol.51 , pp. 72-77
    • Pleshko, N.L.1    Boskey, A.L.2    Mendelsohn, R.3
  • 32
    • 84891697159 scopus 로고    scopus 로고
    • Breast cancer and melanoma cell line identification by FTIR imaging after formalin-fixation and paraffin-embedding
    • PMID: 23689823
    • Verdonck M, Wald N, Janssis J, Yan P, Meyer C, et al. (2013) Breast cancer and melanoma cell line identification by FTIR imaging after formalin-fixation and paraffin-embedding. The Analyst 138: 4083-4091. doi: 10.1039/c3an00246b PMID: 23689823
    • (2013) The Analyst , vol.138 , pp. 4083-4091
    • Verdonck, M.1    Wald, N.2    Janssis, J.3    Yan, P.4    Meyer, C.5
  • 33
    • 0001010420 scopus 로고    scopus 로고
    • Pressure-tuning Fourier transform infrared spectroscopic study of carcinogenesis in human endometrium
    • Fung MFK, Senterman MK, Mikhael NZ, Lacelle S, Wong PT (1996) Pressure-tuning Fourier transform infrared spectroscopic study of carcinogenesis in human endometrium. Biospectroscopy 2: 155-165.
    • (1996) Biospectroscopy , vol.2 , pp. 155-165
    • Fung, M.F.K.1    Senterman, M.K.2    Mikhael, N.Z.3    Lacelle, S.4    Wong, P.T.5
  • 34
    • 0034968559 scopus 로고    scopus 로고
    • Distinguishing malignant from normal oral tissues using FTIR fiber-optic techniques
    • PMID: 11391568
    • Wu JG, Xu YZ, Sun CW, Soloway RD, Xu DF, et al. (2001) Distinguishing malignant from normal oral tissues using FTIR fiber-optic techniques. Biopolymers 62: 185-192. PMID: 11391568
    • (2001) Biopolymers , vol.62 , pp. 185-192
    • Wu, J.G.1    Xu, Y.Z.2    Sun, C.W.3    Soloway, R.D.4    Xu, D.F.5
  • 35
    • 79952217203 scopus 로고    scopus 로고
    • Glycogen storage disease type Ia in canines: A model for human metabolic and genetic liver disease
    • Specht A, Fiske L, Erger K, Cossette T, Verstegen J, et al. (2011) Glycogen storage disease type Ia in canines: a model for human metabolic and genetic liver disease. Journal of biomedicine & biotechnology 2011: 646257.
    • (2011) Journal of biomedicine & biotechnology , vol.2011 , pp. 646257
    • Specht, A.1    Fiske, L.2    Erger, K.3    Cossette, T.4    Verstegen, J.5
  • 36
    • 84874002183 scopus 로고    scopus 로고
    • Dysregulation of multiple facets of glycogen metabolism in a murine model of Pompe disease
    • PMID: 23457523
    • Taylor KM, Meyers E, Phipps M, Kishnani PS, Cheng SH, et al. (2013) Dysregulation of multiple facets of glycogen metabolism in a murine model of Pompe disease. PloS one 8: e56181. doi: 10.1371/journal.pone.0056181 PMID: 23457523
    • (2013) PloS One , vol.8 , pp. e56181
    • Taylor, K.M.1    Meyers, E.2    Phipps, M.3    Kishnani, P.S.4    Cheng, S.H.5
  • 37
    • 0013877594 scopus 로고
    • Continued studies on the formalin method for liver glycogen
    • PMID: 5939859
    • Devor AW, Barichievich RO, Siddiqui B (1966) Continued studies on the formalin method for liver glycogen. Anal Biochem 14: 237-242. PMID: 5939859
    • (1966) Anal Biochem , vol.14 , pp. 237-242
    • Devor, A.W.1    Barichievich, R.O.2    Siddiqui, B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.