-
1
-
-
84255189102
-
RNA folding pathways and the self-assembly of ribosomes
-
Woodson SA (2011) RNA folding pathways and the self-assembly of ribosomes. Acc Chem Res 44(12):1312-1319.
-
(2011)
Acc Chem Res
, vol.44
, Issue.12
, pp. 1312-1319
-
-
Woodson, S.A.1
-
2
-
-
71849084955
-
RNA conformational changes in the life cycles of RNA viruses, viroids, and virus-associated RNAs
-
Simon AE, Gehrke L (2009) RNA conformational changes in the life cycles of RNA viruses, viroids, and virus-associated RNAs. Biochim Biophys Acta 1789(9-10):571-583.
-
(2009)
Biochim Biophys Acta
, vol.1789
, Issue.9-10
, pp. 571-583
-
-
Simon, A.E.1
Gehrke, L.2
-
3
-
-
33749462736
-
The structural and functional role of RNA in icosahedral virus assembly
-
Schneemann A (2006) The structural and functional role of RNA in icosahedral virus assembly. Annu Rev Microbiol 60:51-67.
-
(2006)
Annu Rev Microbiol
, vol.60
, pp. 51-67
-
-
Schneemann, A.1
-
4
-
-
84900458278
-
Infectious diseases. Crippling virus set to conquer Western Hemisphere
-
Enserink M (2014) Infectious diseases. Crippling virus set to conquer Western Hemisphere. Science 344(6185):678-679.
-
(2014)
Science
, vol.344
, Issue.6185
, pp. 678-679
-
-
Enserink, M.1
-
5
-
-
84879798247
-
Clinical trials of human papillomavirus vaccines and beyond. Nature reviews
-
Lehtinen M, Dillner J (2013) Clinical trials of human papillomavirus vaccines and beyond. Nature reviews. Clin Oncol 10(7):400-410.
-
(2013)
Clin Oncol
, vol.10
, Issue.7
, pp. 400-410
-
-
Lehtinen, M.1
Dillner, J.2
-
6
-
-
84902317646
-
Oncogene dependency and the potential of targeted RNAi-based anti-cancer therapy
-
Yan R, Hallam A, Stockley PG, Boyes J (2014) Oncogene dependency and the potential of targeted RNAi-based anti-cancer therapy. Biochem J 461(1):1-13.
-
(2014)
Biochem J
, vol.461
, Issue.1
, pp. 1-13
-
-
Yan, R.1
Hallam, A.2
Stockley, P.G.3
Boyes, J.4
-
7
-
-
84866839868
-
Evidence that viral RNAs have evolved for efficient, two-stage packaging
-
Borodavka A, Tuma R, Stockley PG (2012) Evidence that viral RNAs have evolved for efficient, two-stage packaging. Proc Natl Acad Sci USA 109(39):15769-15774.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.39
, pp. 15769-15774
-
-
Borodavka, A.1
Tuma, R.2
Stockley, P.G.3
-
8
-
-
84878734553
-
A two-stage mechanism of viral RNA compaction revealed by single molecule fluorescence
-
Borodavka A, Tuma R, Stockley PG (2013) A two-stage mechanism of viral RNA compaction revealed by single molecule fluorescence. RNA Biol 10(4):481-489.
-
(2013)
RNA Biol
, vol.10
, Issue.4
, pp. 481-489
-
-
Borodavka, A.1
Tuma, R.2
Stockley, P.G.3
-
9
-
-
84898051188
-
Solving a Levinthal's paradox for virus assembly identifies a unique antiviral strategy
-
Dykeman EC, Stockley PG, Twarock R (2014) Solving a Levinthal's paradox for virus assembly identifies a unique antiviral strategy. Proc Natl Acad Sci USA 111(14): 5361-5366.
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, Issue.14
, pp. 5361-5366
-
-
Dykeman, E.C.1
Stockley, P.G.2
Twarock, R.3
-
10
-
-
0014602774
-
Specificity in self-assembly of bacteriophages Q beta and MS2
-
Ling CM, Hung PP, Overby LR (1969) Specificity in self-assembly of bacteriophages Q beta and MS2. Biochemistry 8(11):4464-4469.
-
(1969)
Biochemistry
, vol.8
, Issue.11
, pp. 4464-4469
-
-
Ling, C.M.1
Hung, P.P.2
Overby, L.R.3
-
11
-
-
34247604476
-
A simple, RNA-mediated allosteric switch controls the pathway to formation of a T=3 viral capsid
-
Stockley PG, et al. (2007) A simple, RNA-mediated allosteric switch controls the pathway to formation of a T=3 viral capsid. J Mol Biol 369(2):541-552.
-
(2007)
J Mol Biol
, vol.369
, Issue.2
, pp. 541-552
-
-
Stockley, P.G.1
-
12
-
-
84881662637
-
Packaging signals in two single-stranded RNA viruses imply a conserved assembly mechanism and geometry of the packaged genome
-
Dykeman EC, Stockley PG, Twarock R (2013) Packaging signals in two single-stranded RNA viruses imply a conserved assembly mechanism and geometry of the packaged genome. J Mol Biol 425(17):3235-3249.
-
(2013)
J Mol Biol
, vol.425
, Issue.17
, pp. 3235-3249
-
-
Dykeman, E.C.1
Stockley, P.G.2
Twarock, R.3
-
13
-
-
84879842986
-
The asymmetric structure of an icosahedral virus bound to its receptor suggests a mechanism for genome release
-
Dent KC, et al. (2013) The asymmetric structure of an icosahedral virus bound to its receptor suggests a mechanism for genome release. Structure 21(7):1225-1234.
-
(2013)
Structure
, vol.21
, Issue.7
, pp. 1225-1234
-
-
Dent, K.C.1
-
14
-
-
80053306574
-
Degenerate RNA packaging signals in the genome of Satellite Tobacco Necrosis Virus: Implications for the assembly of a T=1 capsid
-
Bunka DH, et al. (2011) Degenerate RNA packaging signals in the genome of Satellite Tobacco Necrosis Virus: Implications for the assembly of a T=1 capsid. J Mol Biol 413(1):51-65.
-
(2011)
J Mol Biol
, vol.413
, Issue.1
, pp. 51-65
-
-
Bunka, D.H.1
-
15
-
-
84875429396
-
Sequence-specific, RNA-protein interactions overcome electrostatic barriers preventing assembly of satellite tobacco necrosis virus coat protein
-
Ford RJ, et al. (2013) Sequence-specific, RNA-protein interactions overcome electrostatic barriers preventing assembly of satellite tobacco necrosis virus coat protein. J Mol Biol 425(6):1050-1064.
-
(2013)
J Mol Biol
, vol.425
, Issue.6
, pp. 1050-1064
-
-
Ford, R.J.1
-
16
-
-
0036009861
-
The 5' and 3' extremities of the satellite tobacco necrosis virus translational enhancer domain contribute differentially to stimulation of translation
-
van Lipzig R, et al. (2002) The 5' and 3' extremities of the satellite tobacco necrosis virus translational enhancer domain contribute differentially to stimulation of translation. RNA 8(2):229-236.
-
(2002)
RNA
, vol.8
, Issue.2
, pp. 229-236
-
-
Van Lipzig, R.1
-
17
-
-
0031836986
-
The nucleotide sequence of satellite tobacco necrosis virus strain C and helper-assisted replication of wild-type and mutant clones of the virus
-
Bringloe DH, Gultyaev AP, Pelpel M, Pleij CW, Coutts RH (1998) The nucleotide sequence of satellite tobacco necrosis virus strain C and helper-assisted replication of wild-type and mutant clones of the virus. J Gen Virol 79(Pt 6):1539-1546.
-
(1998)
J Gen Virol
, vol.79
, pp. 1539-1546
-
-
Bringloe, D.H.1
Gultyaev, A.P.2
Pelpel, M.3
Pleij, C.W.4
Coutts, R.H.5
-
18
-
-
0033544415
-
Mutation analysis of cis-elements in the 3'-and 5'-untranslated regions of satellite tobacco necrosis virus strain C RNA
-
Bringloe DH, Pleij CW, Coutts RH (1999) Mutation analysis of cis-elements in the 3'-and 5'-untranslated regions of satellite tobacco necrosis virus strain C RNA. Virology 264(1):76-84.
-
(1999)
Virology
, vol.264
, Issue.1
, pp. 76-84
-
-
Bringloe, D.H.1
Pleij, C.W.2
Coutts, R.H.3
-
19
-
-
0032052157
-
5'-and 3'-sequences of satellite tobacco necrosis virus RNA promoting translation in tobacco
-
Meulewaeter F, Danthinne X, Van Montagu M, Cornelissen M (1998) 5'-and 3'-sequences of satellite tobacco necrosis virus RNA promoting translation in tobacco. Plant J 14(2):169-176.
-
(1998)
Plant J
, vol.14
, Issue.2
, pp. 169-176
-
-
Meulewaeter, F.1
Danthinne, X.2
Van Montagu, M.3
Cornelissen, M.4
-
20
-
-
18044389910
-
Icosahedral packing of RNA viral genomes
-
Rudnick J, Bruinsma R (2005) Icosahedral packing of RNA viral genomes. Phys Rev Lett 94(3):038101.
-
(2005)
Phys Rev Lett
, vol.94
, Issue.3
, pp. 038101
-
-
Rudnick, J.1
Bruinsma, R.2
-
22
-
-
33751235599
-
Electrostatic origin of the genome packing in viruses
-
Belyi VA, MuthukumarM (2006) Electrostatic origin of the genome packing in viruses. Proc Natl Acad Sci USA 103(46):17174-17178.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.46
, pp. 17174-17178
-
-
Belyi, V.A.1
Muthukumar, M.2
-
23
-
-
0021930472
-
The incorporation of radiolabeled polyamines and methionine into turnip yellow mosaic virus in protoplasts from infected plants
-
Balint R, Cohen SS (1985) The incorporation of radiolabeled polyamines and methionine into turnip yellow mosaic virus in protoplasts from infected plants. Virology 144(1):181-193.
-
(1985)
Virology
, vol.144
, Issue.1
, pp. 181-193
-
-
Balint, R.1
Cohen, S.S.2
-
24
-
-
33645290922
-
Physics of RNA and viral assembly
-
Bruinsma RF (2006) Physics of RNA and viral assembly. Eur Phys J E Soft Matter 19(3): 303-310.
-
(2006)
Eur Phys J e Soft Matter
, vol.19
, Issue.3
, pp. 303-310
-
-
Bruinsma, R.F.1
-
25
-
-
55849126359
-
Predicting the sizes of large RNA molecules
-
Yoffe AM, et al. (2008) Predicting the sizes of large RNA molecules. Proc Natl Acad Sci USA 105(42):16153-16158.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.42
, pp. 16153-16158
-
-
Yoffe, A.M.1
-
26
-
-
84906337250
-
Role of electrostatics in the assembly pathway of a singlestranded RNA virus
-
Garmann RF, et al. (2014) Role of electrostatics in the assembly pathway of a singlestranded RNA virus. J Virol 88(18):10472-10479.
-
(2014)
J Virol
, vol.88
, Issue.18
, pp. 10472-10479
-
-
Garmann, R.F.1
-
27
-
-
0343290977
-
Specific binding of eukaryotic initiation factor 2 to satellite tobacco necrosis virus RNA at a 5'-terminal sequence comprising the ribosome binding site
-
Kaempfer R, van Emmelo J, Fiers W (1981) Specific binding of eukaryotic initiation factor 2 to satellite tobacco necrosis virus RNA at a 5'-terminal sequence comprising the ribosome binding site. Proc Natl Acad Sci USA 78(3):1542-1546.
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, Issue.3
, pp. 1542-1546
-
-
Kaempfer, R.1
Van Emmelo, J.2
Fiers, W.3
-
28
-
-
84863181640
-
Host RNAs, including transposons, are encapsidated by a eukaryotic single-stranded RNA virus
-
Routh A, Domitrovic T, Johnson JE (2012) Host RNAs, including transposons, are encapsidated by a eukaryotic single-stranded RNA virus. Proc Natl Acad Sci USA 109(6): 1907-1912.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.6
, pp. 1907-1912
-
-
Routh, A.1
Domitrovic, T.2
Johnson, J.E.3
-
29
-
-
84868033732
-
Packaging host RNAs in small RNA viruses: An inevitable consequence of an error-prone polymerase?
-
Routh A, Domitrovic T, Johnson JE (2012) Packaging host RNAs in small RNA viruses: An inevitable consequence of an error-prone polymerase? Cell Cycle 11(20): 3713-3714.
-
(2012)
Cell Cycle
, vol.11
, Issue.20
, pp. 3713-3714
-
-
Routh, A.1
Domitrovic, T.2
Johnson, J.E.3
-
30
-
-
84883082681
-
Evidence of direct complementary interactions between messenger RNAs and their cognate proteins
-
Polyansky AA, Zagrovic B (2013) Evidence of direct complementary interactions between messenger RNAs and their cognate proteins. Nucleic Acids Res 41(18):8434-8443.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.18
, pp. 8434-8443
-
-
Polyansky, A.A.1
Zagrovic, B.2
-
31
-
-
84883062872
-
Proteome-wide analysis reveals clues of complementary interactions between mRNAs and their cognate proteins as the physicochemical foundation of the genetic code
-
Polyansky AA, Hlevnjak M, Zagrovic B (2013) Proteome-wide analysis reveals clues of complementary interactions between mRNAs and their cognate proteins as the physicochemical foundation of the genetic code. RNA Biol 10(8):1248-1254.
-
(2013)
RNA Biol
, vol.10
, Issue.8
, pp. 1248-1254
-
-
Polyansky, A.A.1
Hlevnjak, M.2
Zagrovic, B.3
-
32
-
-
84867537613
-
Sequence signatures of direct complementarity between mRNAs and cognate proteins on multiple levels
-
Hlevnjak M, Polyansky AA, Zagrovic B (2012) Sequence signatures of direct complementarity between mRNAs and cognate proteins on multiple levels. Nucleic Acids Res 40(18):8874-8882.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.18
, pp. 8874-8882
-
-
Hlevnjak, M.1
Polyansky, A.A.2
Zagrovic, B.3
-
33
-
-
0024974913
-
Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction
-
Namba K, Pattanayek R, Stubbs G (1989) Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction. J Mol Biol 208(2):307-325.
-
(1989)
J Mol Biol
, vol.208
, Issue.2
, pp. 307-325
-
-
Namba, K.1
Pattanayek, R.2
Stubbs, G.3
-
34
-
-
0027960331
-
Crystal structure of an RNA bacteriophage coat protein-operator complex
-
Valegård K, Murray JB, Stockley PG, Stonehouse NJ, Liljas L (1994) Crystal structure of an RNA bacteriophage coat protein-operator complex. Nature 371(6498):623-626.
-
(1994)
Nature
, vol.371
, Issue.6498
, pp. 623-626
-
-
Valegård, K.1
Murray, J.B.2
Stockley, P.G.3
Stonehouse, N.J.4
Liljas, L.5
-
35
-
-
0000904610
-
Correlation between particle multiplicity and location on virion RNA of the assembly initiation site for viruses of the tobacco mosaic virus group
-
Fukuda M, Meshi T, Okada Y, Otsuki Y, Takebe I (1981) Correlation between particle multiplicity and location on virion RNA of the assembly initiation site for viruses of the tobacco mosaic virus group. Proc Natl Acad Sci USA 78(7):4231-4235.
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, Issue.7
, pp. 4231-4235
-
-
Fukuda, M.1
Meshi, T.2
Okada, Y.3
Otsuki, Y.4
Takebe, I.5
-
36
-
-
0016792597
-
Sequence of a specifically encapsidated RNA fragment originating from the tobacco-mosaic-virus coat-protein cistron
-
Guilley H, Jonard G, Richards KE, Hirth L (1975) Sequence of a specifically encapsidated RNA fragment originating from the tobacco-mosaic-virus coat-protein cistron. Eur J Biochem 54(1):135-144.
-
(1975)
Eur J Biochem
, vol.54
, Issue.1
, pp. 135-144
-
-
Guilley, H.1
Jonard, G.2
Richards, K.E.3
Hirth, L.4
-
37
-
-
0021100912
-
Molecular cloning and nucleotide sequence of the 30K and the coat protein cistron of TMV (tomato strain) genome
-
Takamatsu N, Ohno T, Meshi T, Okada Y (1983) Molecular cloning and nucleotide sequence of the 30K and the coat protein cistron of TMV (tomato strain) genome. Nucleic Acids Res 11(11):3767-3778.
-
(1983)
Nucleic Acids Res
, vol.11
, Issue.11
, pp. 3767-3778
-
-
Takamatsu, N.1
Ohno, T.2
Meshi, T.3
Okada, Y.4
-
38
-
-
33748940970
-
Genome packaging by spherical plant RNA viruses
-
Rao AL (2006) Genome packaging by spherical plant RNA viruses. Annu Rev Phytopathol 44:61-87.
-
(2006)
Annu Rev Phytopathol
, vol.44
, pp. 61-87
-
-
Rao, A.L.1
-
39
-
-
84860389408
-
Construction and crystal structure of recombinant STNV capsids
-
Lane SW, et al. (2011) Construction and crystal structure of recombinant STNV capsids. J Mol Biol 413(1):41-50.
-
(2011)
J Mol Biol
, vol.413
, Issue.1
, pp. 41-50
-
-
Lane, S.W.1
-
40
-
-
0023053991
-
Structure and assembly of turnip crinkle virus. II. Mechanism of reassembly in vitro
-
Sorger PK, Stockley PG, Harrison SC (1986) Structure and assembly of turnip crinkle virus. II. Mechanism of reassembly in vitro. J Mol Biol 191(4):639-658.
-
(1986)
J Mol Biol
, vol.191
, Issue.4
, pp. 639-658
-
-
Sorger, P.K.1
Stockley, P.G.2
Harrison, S.C.3
-
41
-
-
84878677042
-
Packaging signals in single-stranded RNA viruses: Nature's alternative to a purely electrostatic assembly mechanism
-
Stockley PG, et al. (2013) Packaging signals in single-stranded RNA viruses: Nature's alternative to a purely electrostatic assembly mechanism. J Biol Phys 39(2):277-287.
-
(2013)
J Biol Phys
, vol.39
, Issue.2
, pp. 277-287
-
-
Stockley, P.G.1
-
42
-
-
84901660787
-
Structural basis of the non-coding RNA RsmZ acting as a protein sponge
-
Duss O, et al. (2014) Structural basis of the non-coding RNA RsmZ acting as a protein sponge. Nature 509(7502):588-592.
-
(2014)
Nature
, vol.509
, Issue.7502
, pp. 588-592
-
-
Duss, O.1
|