CRISPR-Cas9-based photoactivatable transcription system

Chemistry and Biology

Volumn 22, Issue 2, 2015, Pages 169-174

  Nihongaki, Yuta ^a   Yamamoto, Shun ^a   Kawano, Fuun ^a   Suzuki, Hideyuki ^a   Sato, Moritoshi ^a  

^a UNIVERSITY OF TOKYO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ARTICLE; BIOLOGY; BIOTECHNOLOGY; CONTROLLED STUDY; CRISPR CAS SYSTEM; CRISPR CAS9 BASED PHOTOACTIVATABLE TRANSCRIPTION SYSTEM; FEMALE; GENE; GENE ACTIVATION; GENE EXPRESSION; HUMAN; HUMAN CELL; LIGHT; MAMMAL CELL; NONHUMAN; PHOTOACTIVATION; PRIORITY JOURNAL; ANIMAL; CHLOROCEBUS AETHIOPS; CLUSTERED REGULARLY INTERSPACED SHORT PALINDROMIC REPEAT; COS 1 CELL LINE; GENETICS; HEK293 CELL LINE; HELA CELL LINE; LUMINESCENCE; METABOLISM; PROMOTER REGION; TRANSCRIPTION INITIATION;

MAMMALIA;

ASCL1 PROTEIN, HUMAN; BASIC HELIX LOOP HELIX TRANSCRIPTION FACTOR;

ANIMALS; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORS; CERCOPITHECUS AETHIOPS; CLUSTERED REGULARLY INTERSPACED SHORT PALINDROMIC REPEATS; COS CELLS; CRISPR-CAS SYSTEMS; HEK293 CELLS; HELA CELLS; HUMANS; LIGHT; LUMINESCENT MEASUREMENTS; PROMOTER REGIONS, GENETIC; TRANSCRIPTION INITIATION, GENETIC;

EID: 84923141668     PISSN: 10745521     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.chembiol.2014.12.011     Document Type: Article

References (16)

1. C. Brieke, F. Rohrbach, A. Gottschalk, G. Mayer, and A. Heckel Light-controlled tools Angew. Chem. Int. Ed. Engl. 51 2012 8446 8476
2. B. Chen, L.A. Gilbert, B.A. Cimini, J. Schnitzbauer, W. Zhang, G.W. Li, J. Park, E.H. Blackburn, J.S. Weissman, and L.S. Qi Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system Cell 155 2013 1479 1491
3. A.W. Cheng, H. Wang, H. Yang, L. Shi, Y. Katz, T.W. Theunissen, S. Rangarajan, C.S. Shivalila, D.B. Dadon, and R. Jaenisch Multiplexed activation of endogenous genes by CRISPR-on, an RNA-guided transcriptional activator system Cell Res. 23 2013 1163 1171
4. M.L. de Groote, P.J. Verschure, and M.G. Rots Epigenetic editing: targeted rewriting of epigenetic marks to modulate expression of selected target genes Nucleic Acids Res. 40 2012 10596 10613
5. L.A. Gilbert, M.H. Larson, L. Morsut, Z. Liu, G.A. Brar, S.E. Torres, N. Stern-Ginossar, O. Brandman, E.H. Whitehead, and J.A. Doudna CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes Cell 154 2013 442 451
6. M. Jinek, F. Jiang, D.W. Taylor, S.H. Sternberg, E. Kaya, E. Ma, C. Anders, M. Hauer, K. Zhou, and S. Lin Structures of Cas9 endonucleases reveal RNA-mediated conformational activation Science 343 2014 1247997
7. M.J. Kennedy, R.M. Hughes, L.A. Peteya, J.W. Schwartz, M.D. Ehlers, and C.L. Tucker Rapid blue-light-mediated induction of protein interactions in living cells Nat. Methods 7 2010 973 975
8. S. Konermann, M.D. Brigham, A. Trevino, P.D. Hsu, M. Heidenreich, L. Cong, R.J. Platt, D.A. Scott, G.M. Church, and F. Zhang Optical control of mammalian endogenous transcription and epigenetic states Nature 500 2013 472 476
9. F. Lienert, J.J. Lohmueller, A. Garg, and P.A. Silver Synthetic biology in mammalian cells: next generation research tools and therapeutics Nat. Rev. Mol. Cell Biol. 15 2014 95 107
10. M.L. Maeder, S.J. Linder, V.M. Cascio, Y. Fu, Q.H. Ho, and J.K. Joung CRISPR RNA-guided activation of endogenous human genes Nat. Methods 10 2013 977 979
11. M.L. Maeder, J.F. Angstman, M.E. Richardson, S.J. Linder, V.M. Cascio, S.Q. Tsai, Q.H. Ho, J.D. Sander, D. Reyon, and B.E. Bernstein Targeted DNA demethylation and activation of endogenous genes using programmable TALE-TET1 fusion proteins Nat. Biotechnol. 31 2013 1137 1142
12. A.C. Mercer, T. Gaj, R.P. Fuller, and C.F. Barbas Chimeric TALE recombinases with programmable DNA sequence specificity Nucleic Acids Res. 40 2012 11163 11172
13. J.C. Miller, S. Tan, G. Qiao, K.A. Barlow, J. Wang, D.F. Xia, X. Meng, D.E. Paschon, E. Leung, and S.J. Hinkley A TALE nuclease architecture for efficient genome editing Nat. Biotechnol. 29 2011 143 148
14. H. Nishimasu, F.A. Ran, P.D. Hsu, S. Konermann, S.I. Shehata, N. Dohmae, R. Ishitani, F. Zhang, and O. Nureki Crystal structure of Cas9 in complex with guide RNA and target DNA Cell 156 2014 935 949
15. P. Perez-pinera, D.D. Kocak, C.M. Vockley, A.F. Adler, A.M. Kabadi, L.R. Polstein, P.I. Thakore, K.A. Glass, D.G. Ousterout, and K.W. Leong RNA-guided gene activation by CRISPR-Cas9-based transcription factors Nat. Methods 10 2013 973 976
16. L.S. Qi, M.H. Larson, L.A. Gilbert, J.A. Doudna, J.S. Weissman, A.P. Arkin, and W.A. Lim Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression Cell 152 2013 1173 1183