The importance of vertical resolution in sea ice algae production models

Journal of Marine Systems

Volumn 145, Issue , 2015, Pages 69-90

  Duarte, Pedro ^a   Assmy, Philipp ^a   Hop, Haakon ^a   Spreen, Gunnar ^a   Gerland, Sebastian ^a   Hudson, Stephen R ^a  

^a NORWEGIAN POLAR INSTITUTE   (Norway)

Author keywords

Abiotic factors; Arctic Ocean; Ice algae; Limiting factors; Marine ecology; Modeling; Sea ice

Indexed keywords

ALGAE; ECOLOGY; ECOSYSTEMS; ESTIMATION; GLOBAL WARMING; MODELS; SEA ICE;

ABIOTIC FACTORS; ARCTIC OCEAN; ICE ALGAE; LIMITING FACTORS; MARINE ECOLOGY;

ICE;

ALGA; GLOBAL WARMING; MARINE ECOSYSTEM; NUMERICAL MODEL; PRIMARY PRODUCTION; RESOLUTION;

ARCTIC OCEAN;

ALGAE;

EID: 84923039288     PISSN: 09247963     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmarsys.2014.12.004     Document Type: Article

References (79)

1. Arrigo K.R Sea ice ecosystems. Annu. Rev. Mar. Sci. 2014, 6:439-467.
2. Arrigo K.R., Sullivan C.W. The influence of salinity and temperature covariation on the photophysiological characteristics of Antarctic sea ice microalgae. J. Phycol. 1993, 28:746-756.
3. Arrigo K.R., Kremer J.N., Sullivan C.W. A simulated Antarctic fast ice ecosystem. J. Geophys. Res. 1993, 98:6926-6946.
4. Arrigo K.R., Worthen D.L., Lizotte M.P., Dixon P., Dieckmann G. Primary production in Antarctic sea ice. Science 1997, 276:394-397.
5. Aumack C.F., Juhl A.R., Krembs C. Diatom vertical migration within land-fast Arctic sea ice. J. Mar. Syst. 2014, 139:496-504.
6. Azevedo I.C., Bordalo A.A., Duarte P. Influence of freshwater inflow variability on the Douro estuary primary productivity: a modelling study. Ecol. Model. 2014, 272:1-15.
7. Baretta-Bekker J.G., Baretta J.W., Ebenhoh W. Microbial dynamics in the marine ecosystem model ERSEM ii with decoupled carbon assimilation and nutrient uptake. J. Sea Res. 1997, 38:195-211.
8. Bergman T., Richardson T.L., Paerl H.W., Pinckney J.L., Schofield O. Synergy of light and nutrients on the photosynthetic efficiency of phytoplankton populations from the Neuse River Estuary, North Carolina. J. Plankton Res. 2002, 24:923-933.
9. Boetius A., Albrecht S., Bakker K., Bienhold C., Felden J., Fernández-Méndez M., Hendricks S., Katlein C., Lalande C., Krumpen T., Nicolaus M., Peeken I., Rabe B., Rogacheva A., Rybakova E., Somavilla R., Wenzhöfer F. Export of algal biomass from the melting Arctic sea ice. Science 2012, 339:1430-1432.
10. Brock T.D. Calculating solar radiation for ecological studies. Ecol. Model. 1981, 14:1-9.
11. Cochlan W.P., Harrison P.J. Uptake of nitrate, ammonium, and urea by nitrogen-starved cultures of Micromonas pusilla (Prasinophyceae): transient responses. J. Phycol. 1991, 673-679.
12. Cota G.F., Home E.P.W. Physical control of ice-algal production in the high Arctic. Mar. Ecol. Prog. Ser. 1989, 52:111-121.
13. Cota G.F., Smith R.E.H. Ecology of bottom ice algae: II. Dynamics, distributions and productivity. J. Mar. Syst. 1991, 2:279-295.
14. Cota G.F., Legendre L., Gosselin M., Ingram R.G. Ecology of bottom ice algae: I. Environmental controls and variability. J. Mar. Syst. 1991, 2:257-277.
15. Cota G.F., Legendre L., Gosselin M., Ingram R.G. Ecology of bottom ice algae: III. Comparative physiology. J. Mar. Syst. 1991, 2:297-315.
16. Cox G.F.N., Weeks W.F. Brine drainage and initial salt entrapment in sodium chloride ice. Res. Rep. 1975, 345. U.S. Army Cold Reg. Res. Eng. Lab, Hanover N.H.
17. Daly K.L., Wallace D.W.R., Smith W.O., Skoog A., Lara R., Gosselin M., Falck E., Yager O.L. Non-Redfield carbon and nitrogen cycling in the Arctic: Effects of ecosystem structure and dynamics. J. Geophys. Res. 1999, 104:3185-3199.
18. de Jonge V.N. Fluctuations in the organic carbon to chlorophyll a ratios for estuarine benthic diatom populations. Mar. Ecol. Prog. Ser. 1980, 2:345-353.
19. Duarte P., Azevedo B., Ribeiro C., Pereira A., Falcão M., Serpa D., Bandeira R., Reia J. Management oriented mathematical modelling of Ria Formosa (South Portugal). Transit. Water Monogr. 2007, 1:13-51.
20. Duarte P., Azevedo B., Guerreiro M., Ribeiro C., Bandeira R., Pereira A., Falcão M., Serpa D., Reia J. Biogeochemical modelling of Ria Formosa (South Portugal). Hydrobiologia 2008, 611:115-132.
21. Ducobu H., Huisman J., Jonker R.R., Mur L.R. Competition between a Prochlorophyte and a Cyanobacterium under various phosphorus regimes: comparison with the droop model. J. Phycol. 1998, 34:467-476.
22. Elliott S.E., Deal C.J., Humphries G., Hunke E., Jin M., Stefels j., Levasseur m. Pan-Arctic simulation of coupled nutrient-sulfur cycling due to sea ice biology. J. Geophys. Res. 2012, 117:G01016. 10.1029/2011JG001649.
23. Elser J.J., Bracken M.E.S., Cleland E.E., Gruner D.S., Harpole W.S., Hillebrand H., Ngai J.T., Seabloom E.W., Shurin J.B., Smith J.E. Global analysis of nitrogen and phosphorus limitation of primary producers in freshwater, marine and terrestrial ecosystems. Ecol. Lett. 2007, 10:1135-1142.
24. Falkowski P.G., Raven J.A. Aquatic Photosynthesis 1997, Blackwell Science, Maden.
25. Garrison D.L., Sullivan C.W., Ackley S.F. Sea ice microbial communities in Antarctica. Bioscience 1986, 36:243-250.
26. Gerland S., Winther J.-G., Ørbæk J.B., Ivanov B.V. Physical properties, spectral reflectance and thickness development of first year ice in Kongsfjorden, Svalbard. Polar Res. 1999, 18:275-282.
27. Gradinger R. Vertical fine structure of the biomass and composition of algal communities in Arctic pack ice. Mar. Biol. 1999, 133:745-754.
28. Gradinger R. Sea-ice algae: major contributors to primary production and algal biomass in the Chukchi and Beaufort Seas during May/June 2002. Deep-Sea Res. II 2009, 56:1201-1212.
29. Grenfell T.C., Maykut T.A. The optical properties of ice and snow in the Arctic Basin. J. Glaciol. 1977, 18:445-463.
30. Hunke E.C., Lipscomb W.H., Turner A.K., Jeffery N., Elliot S. CICE: the Los Alamos Sea Ice Model. Documentation and User's Manual Version 5.0 2013, Los Alamos National Laboratory.
31. Jeffery N., Hunke E.C., Elliott S.M. Modeling the transport of passive tracers in sea ice. J. Geophys. Res. 2011, 116:C07020. 10.1029/2010JC006527.
32. Jin M., Deal C.J., Wang J., Shin K.-H., Tanaka N., Whitledge T.E., Lee S.H., Gradinger R.R. Controls of the landfast ice-ocean ecosystem offshore Barrow, Alaska. Ann. Glaciol. 2006, 44:63-72.
33. Jin M., Deal C., Wang J. A coupled ice-ocean ecosystem model for I-D and 3-D applications in the Bering and Chukchi Seas. Chin. J. Polar Sci. 2008, 19:218-229.
34. Jin M., Deal C., Lee S.H., Elliot S., Hunke E., Maltrud M., Jeffery N. Investigation of Arctic sea ice and oceanic primary production for the period 1992-2007 using a 3-D global ice-ocean ecosystem model. Deep-Sea Res. II Top. Stud. Oceanogr. 2012, 81-84:28-35.
35. Jørgensen S.E., Bendoricchio G. Fundamentals of ecological modelling. Developments in Ecological Modelling 2001, 21. Elsevier, Amsterdam.
36. Jørgensen S.E., Nielsen S., Jørgensen L. Handbook of Ecological Parameters and Ecotoxicology 1991, Elsevier, Amsterdam.
37. Kwok R., Rothrock D.A. Decline in Arctic sea ice thickness from submarine and ICESat records: 1958-2008. Geophys. Res. Lett. 2009, 36:L15501. 10.1029/2009GL039035.
38. Langdon C. The significance of respiration in production measurements based on oxygen. ICES Mar. Sci. Symp. 1993, 197:69-78.
39. Lavoie D., Denman K., Michel C. Modeling ice-algal growth and decline in a seasonally ice-covered region of the Arctic (Resolute Passage, Canadian Archipelago). J. Geophys. Res. 2005, 110:C11009.
40. Legendre L., Ackley S.F., Dieckmann G.S., Gulliksen B., Horner R., Hoshiai T., Melnikov I.A., Reeburgh W.S., Spindler M., Sullivan C.W. Ecology of sea ice biota-part 2: global significance. Polar Biol. 1992, 12:429-444.
41. Leu E., Søreide J.E., Hessen D.O., Falk-Petersen S., Berge J. Consequences of changing sea-ice cover for primary and secondary producers in the European Arctic shelf seas: timing, quantity, and quality. Prog. Oceanogr. 2011, 90:18-32.
42. Light B., Grenfell T.C., Perovich D.K. Transmission and absorption of solar radiation by Arctic sea ice during the melt season. J. Geophys. Res. 2008, 113:C03023.
43. Melnikov I.A., Kolosova E.G., Welch H.E., Zhitina L.S. Sea ice biological communities and nutrient dynamics in the Canada Basin of the Arctic Ocean. Deep-Sea Res. 2002, 49:1623-1649.
44. Mock T., Gradinger R. Determination of ice-algal production with a new in situ incubation technique. Mar. Ecol. Prog. Ser. 1999, 177:15-26.
45. Moore J.K., Doney S.C., Kleypas J.A., Glover D.M., Fung I.Y. An intermediate complexity marine ecosystem model for the global domain. Deep-Sea Res. II 2002, 49:403-462.
46. Mundy C.J., Gosselin M., Ehn J.K., Belzile C., Poulin M., Alou E., Roy S., Hop H., Lessard S., Parakyriakou T.N., Barber D.G., Stewart J. Characteristics of two distinct high-light acclimated algal communities during advanced stages of sea ice melt. Polar Biol. 2011, 34:1869-1886.
47. Nguyen A.T., Menemenlis D., Kwok R. Arctic ice-ocean simulation with optimized model parameters: approach and assessment. J. Geophys. Res. 2011, 116:C04025.
48. Nguyen A.T., Kwok R., Menemenlis D. Source and pathway of the Western Arctic Upper Halocline in a data-constrained coupled ocean and sea ice model. J. Phys. Oceanogr. 2012, 42:802-823.
49. 2 during periods of snowmelt and surface flooding. J. Geophys. Res. 2013, 118:6511-6524.
50. Odum H.T. An energy circuit language for ecological and social systems: Its physical basis. Systems Analysis and Simulation in Ecology 1975, vol. II:139-211. Academic Press, London. B.C. Patten (Ed.).
51. Pabi S., van Dijken G.L., Arrigo K. Primary production in the Arctic Ocean, 1998-2006. J. Geophys. Res. 2008, 113:C08005.
52. Parsons T.R., Takahashi M., Hargrave B. Biological Oceanographic Processes 1984, Pergamon Press. 3rd edition.
53. Pereira A., Duarte A., Norro A. Different modelling tools of aquatic ecosystems: a proposal for a unified approach. Ecol. Inform. 2006, 1:407-421.
54. Perovitch D.K. Light reflection and transmission by a temperate snow cover. J. Glaciol. 2007, 53:201-210.
55. Platt T., Gallegos C.L., Harrison W.G. Photoinhibition of photosynthesis in natural assemblages of marine phytoplankton. J. Mar. Res. 1980, 38:687-701.
56. Pogson L., Tremblay B., Lavoie D., Michel C., Vancoppenole M. Development and validation of a one-dimensional snow-ice algae model against observations in Resolute Passage, Canadian Arctic Archipelago. J. Geophys. Res. 2011, 116:C07020. 10.1029/2010JC00652.
57. Poltermann M. Arctic sea ice as feeding ground for amphipods - food sources and strategies. Polar Biol. 2001, 24:89-96.
58. Polyakov I.V., Walsh J.E., Kwok R. Recent changes of Arctic multiyear sea ice coverage and the likely causes. Bull. Am. Meteorol. Soc. 2012, 93:145-151.
59. Portela L.I., Neves R. Modelling temperature distribution in the shallow Tejo estuary. Advances in Water Resources Technology and Management 1994, 457-463. Balkema, Rotterdam. G. Tsakiris, M.A. Santos (Eds.).
60. Rignot E., Fenty I., Menemenlis D., Xu Y. Spreading of warm ocean waters around Greenland as a possible cause for glacier acceleration. Ann. Glaciol. 2012, 53:257-266.
61. Rösel A., Kaleschke L. Exceptional melt pond occurrence in the years 2007 and 2011 on the Arctic sea ice revealed from MODIS satellite data. J. Geophys. Res. 2012, 117:C05018.
62. Saenz B.T., Arrigo K.R. Simulation of a sea ice ecosystem using a hybrid model for slush layer desalination. J. Geophys. Res. 2012, 116:C07020. 10.1029/2011JC007544.
63. Sathyendranath S., Stuart V., Nair A., Oka K., Nakane T., Bouman H., Forget M.-H., Maass H., Platt T. Carbon-to-chlorophyll ratio and growth rate of phytoplankton in the sea. Mar. Ecol. Prog. Ser. 2009, 383:73-84.
64. Smith R.E.H., Anning J., Clement P., Cota G. Abundance and production of ice algae in Resolute Passage, Canadian Arctic. Mar. Ecol. Prog. Ser. 1988, 48:251-263.
65. Søreide J.E., Leu E., Berge J., Graeve M., Falk-Petersen S. Timing of blooms, algal food quality and Calanus glacialis reproduction and growth in a changing Arctic. Glob. Chang. Biol. 2010, 16:3154-3163.
66. Søreide J.E., Carroll M.L., Hop H., Ambrose W.G., Hegseth E.N., Falk-Petersen S. Sympagic-pelagic-benthic coupling in Arctic and Atlantic waters around Svalbard revealed by stable isotopic and fatty acid tracers. Mar. Biol. Res. 2013, 9:831-850.
67. Syvertsen E.E. Ice algae in the Barents Sea: types of assemblages, origin, fate and role in the ice edge phytoplankton bloom. Polar Res. 1991, 10:277-287.
68. Tamelander T., Renaud P.E., Hop H., Carroll M.L., Ambrose W.G., Hobson K.A. Trophic relationships and pelagic-benthic coupling during summer in the Barents Sea Marginal Ice Zone, revealed by stable carbon and nitrogen isotope measurements. Mar. Ecol. Prog. Ser. 2006, 310:33-46.
69. Tamelander T., Reigstad M., Olli K., Slagstad D., Wassmann P. New production regulates export stoichiometry in the ocean. PLoS One 2013, 8:e54027. 10.1371/journal.pone.0054027.
70. Tedesco L., Vichi M. Sea ice biogeochemistry: a guide for modellers. PLoS One 2014, 9(2):e89217. 10.1371/journal.pone.0089217.
71. Tedesco L., Vichi M., Haapala J., Stipa T. A dynamic biologically active layer for numerical studies of the sea ice ecosystem. Ocean Model 2010, 35:89-104.
72. Tedesco L., Vichi M., Thomas D.N. Process studies on the ecological coupling between sea ice algae and phytoplankton. Ecol. Model. 2012, 226:120-138.
73. Vancoppenolle M., Goose H., Montety A., Fichefet T., Tremblay B., Tison J.-L. Modeling brine and nutrient dynamics in Antarctic sea ice: the case of dissolved silica. J. Geophys. Res. 2010, 116:C07020. 10.1029/2010JC006119.
74. Vancoppenolle M., Meiners K.M., Michel C., Bopp L., Brabant F., Carnat G., Delille B., Lannuzel D., Madec G., Moreau S., Tison J.-L., van der Merwe P. Role of sea ice in global biogeochemical cycles: emerging views and challenges. Quat. Sci. Rev. 2013, 79:207-230.
75. Vichi M., Pinardi N., Masina S. A generalized model of pelagic biogeochemistry for the global ocean ecosystem. Part I. Theory. J. Mar. Syst. 2007, 64(1-4):89-109.
76. Vollenweider R.A. A manual on methods for measuring primary productivity in aquatic environments 1974, Blackwell Scientific Publications.
77. Welch H.E., Bergmann M.A. Seasonal development of ice algae and its prediction from environmental factors near Resolute, N.W.T., Canada. Can. J. Fish. Aquat. Sci. 1989, 46:1793-1804.
78. Wykoff D.D., Davies J.P., Melis A., Grossman A.R. The regulation of photosynthetic electron Transport during nutrient deprivation in Chlamydomonas reinhardtii. Plant Physiol. 1998, 117:129-139.
79. Zhang Q., Gradinger R., Spindler M. Dark survival of marine microalgae in the high Arctic (Greenland Sea). Polarforschung 1998, 65:111-116.