Corrigendum to “Genome-wide association interaction analysis for Alzheimer's disease.” [Neurobiol. Aging (2014) 35 (2436–2443)] (S0197458014003777)(10.1016/j.neurobiolaging.2014.05.014);Genome-wide association interaction analysis for Alzheimer's disease

Neurobiology of Aging

Volumn 35, Issue 11, 2014, Pages 2436-2443

  Gusareva, Elena S ^a   Carrasquillo, Minerva M ^b   Bellenguez, Céline ^c,d,e   Cuyvers, Elise ^f,g   Colon, Samuel ^b   Graff Radford, Neill R ^b   Petersen, Ronald C ^h   Dickson, Dennis W ^b   Mahachie John, Jestinah M ^a   Bessonov, Kyrylo ^a   Van Broeckhoven, Christine ^f,g   Harold, Denise ⁱ   Williams, Julie ⁱ   Amouyel, Philippe ^c,d,e   Sleegers, Kristel ^f,g   Ertekin Taner, Nilüfer ^b   Lambert, Jean Charles ^c,d,e   Van Steen, Kristel ^a  

^a UNIVERSITY OF LIÈGE   (Belgium)

^b MAYO CLINIC   (United States)

^c INSERM   (France)

^d INSTITUT PASTEUR DE LILLE   (France)

^e UNIV LILLE   (France)

^f DEPARTMENT OF PLANT SYSTEMS BIOLOGY   (Belgium)

^g UNIVERSITY OF ANTWERP   (Belgium)

^h MAYO CLINIC   (United States)

ⁱ CARDIFF UNIVERSITY SCHOOL OF MEDICINE   (United Kingdom)

Author keywords

Alzheimer; Complex trait analysis; Epistasis; GWAI; Replication

Indexed keywords

TRANSCRIPTOME; CRYL1 PROTEIN, HUMAN; CRYSTALLIN; KHDRBS2 PROTEIN, HUMAN; RNA BINDING PROTEIN;

ADULT; AGED; ALZHEIMER DISEASE; ARTICLE; CHROMOSOME 13Q; CHROMOSOME 6Q; CLINICAL PROTOCOL; COHORT ANALYSIS; CONTROLLED STUDY; CRYL1 GENE; DISEASE ACTIVITY; DISEASE ASSOCIATION; EPISTASIS; FEMALE; GENE; GENE FUNCTION; GENE IDENTIFICATION; GENE LOCATION; GENETIC ASSOCIATION; GENETIC SCREENING; GENOME ANALYSIS; HUMAN; KHDRBS2 GENE; MAJOR CLINICAL STUDY; MALE; MIDDLE AGED; MOLECULAR PATHOLOGY; SIGNAL TRANSDUCTION; SINGLE NUCLEOTIDE POLYMORPHISM; TEMPORAL CORTEX; CEREBELLUM; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENETICS; GENOME-WIDE ASSOCIATION STUDY; META ANALYSIS (TOPIC); PROCEDURES; TEMPORAL LOBE;

ALZHEIMER DISEASE; CEREBELLUM; COHORT STUDIES; CRYSTALLINS; EPISTASIS, GENETIC; FEMALE; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENOME-WIDE ASSOCIATION STUDY; HUMANS; MALE; META-ANALYSIS AS TOPIC; RNA-BINDING PROTEINS; TEMPORAL LOBE;

EID: 84922938637     PISSN: 01974580     EISSN: 15581497     Source Type: Journal    
DOI: 10.1016/j.neurobiolaging.2015.11.015     Document Type: Erratum

References (27)

1. Allen M., Zou F., Chai H.S., Younkin C.S., Miles R., Nair A.A., Crook J.E., Pankratz V.S., Carrasquillo M.M., Rowley C.N., Nguyen T., Ma L., Malphrus K.G., Bisceglio G., Ortolaza A.I., Palusak R., Middha S., Maharjan S., Georgescu C., Schultz D., Rakhshan F., Kolbert C.P., Jen J., Sando S.B., Aasly J.O., Barcikowska M., Uitti R.J., Wszolek Z.K., Ross O.A., Petersen R.C., Graff-Radford N.R., Dickson D.W., Younkin S.G., Ertekin-Taner N. Glutathione S-transferase omega genes in Alzheimer and Parkinson disease risk, age-at-diagnosis and brain gene expression: an association study with mechanistic implications. Mol. Neurodegener. 2012, 7:13.
2. Anastassiou D. Computational analysis of the synergy among multiple interacting genes. Mol. Syst. Biol. 2007, 3:83.
3. Berchtold D., Piccolis M., Chiaruttini N., Riezman I., Riezman H., Roux A., Walther T.C., Loewith R. Plasma membrane stress induces relocalization of Slm proteins and activation of TORC2 to promote sphingolipid synthesis. Nat. Cell Biol. 2012, 14:542-547.
4. Bettens K., Brouwers N., Van Miegroet H., Gil A., Engelborghs S., De Deyn P.P., Vandenberghe R., Van Broeckhoven C., Sleegers K. Follow-up study of susceptibility loci for Alzheimer's disease and onset age identified by genome-wide association. J.Alzheimer's Dis. 2010, 19:1169-1175.
5. Bettens K., Sleegers K., Van Broeckhoven C. Genetic insights in Alzheimer's disease. Lancet Neurol. 2013, 12:92-104.
6. Birnbaum S., Ludwig K.U., Reutter H., Herms S., Steffens M., Rubini M., Baluardo C., Ferrian M., Almeida de Assis N., Alblas M.A., Barth S., Freudenberg J., Lauster C., Schmidt G., Scheer M., Braumann B., Berge S.J., Reich R.H., Schiefke F., Hemprich A., Potzsch S., Steegers-Theunissen R.P., Potzsch B., Moebus S., Horsthemke B., Kramer F.J., Wienker T.F., Mossey P.A., Propping P., Cichon S., Hoffmann P., Knapp M., Nothen M.M., Mangold E. Key susceptibility locus for nonsyndromic cleft lip with or without cleft palate on chromosome 8q24. Nature Genet. 2009, 41:473-477.
7. Cattaert T., Calle M.L., Dudek S.M., Mahachie John J.M., Van Lishout F., Urrea V., Ritchie M.D., Van Steen K. Model-based multifactor dimensionality reduction for detecting epistasis in case-control data in the presence of noise. Ann. Hum. Genet. 2011, 75:78-89.
8. Dickson R.C. Thematic review series: sphingolipids. New insights into sphingolipid metabolism and function in budding yeast. J.Lipid Res. 2008, 49:909-921.
9. Harold D., Abraham R., Hollingworth P., Sims R., Gerrish A., Hamshere M.L., Pahwa J.S., Moskvina V., Dowzell K., Williams A., Jones N., Thomas C., Stretton A., Morgan A.R., Lovestone S., Powell J., Proitsi P., Lupton M.K., Brayne C., Rubinsztein D.C., Gill M., Lawlor B., Lynch A., Morgan K., Brown K.S., Passmore P.A., Craig D., McGuinness B., Todd S., Holmes C., Mann D., Smith A.D., Love S., Kehoe P.G., Hardy J., Mead S., Fox N., Rossor M., Collinge J., Maier W., Jessen F., Schurmann B., van den Bussche H., Heuser I., Kornhuber J., Wiltfang J., Dichgans M., Frolich L., Hampel H., Hull M., Rujescu D., Goate A.M., Kauwe J.S., Cruchaga C., Nowotny P., Morris J.C., Mayo K., Sleegers K., Bettens K., Engelborghs S., De Deyn P.P., Van Broeckhoven C., Livingston G., Bass N.J., Gurling H., McQuillin A., Gwilliam R., Deloukas P., Al-Chalabi A., Shaw C.E., Tsolaki M., Singleton A.B., Guerreiro R., Muhleisen T.W., Nothen M.M., Moebus S., Jockel K.H., Klopp N., Wichmann H.E., Carrasquillo M.M., Pankratz V.S., Younkin S.G., Holmans P.A., O'Donovan M., Owen M.J., Williams J. Genome-wide association study identifies variants at CLU and PICALM associated with Alzheimer's disease. Nat. Genet. 2009, 41:1088-1093.
10. Hillmer A.M., Brockschmidt F.F., Hanneken S., Eigelshoven S., Steffens M., Flaquer A., Herms S., Becker T., Kortum A.K., Nyholt D.R., Zhao Z.Z., Montgomery G.W., Martin N.G., Muhleisen T.W., Alblas M.A., Moebus S., Jockel K.H., Brocker-Preuss M., Erbel R., Reinartz R., Betz R.C., Cichon S., Propping P., Baur M.P., Wienker T.F., Kruse R., Nothen M.M. Susceptibility variants for male-pattern baldness on chromosome 20p11. Nature Genet. 2008, 40:1279-1281.
11. Lambert J.C., Heath S., Even G., Campion D., Sleegers K., Hiltunen M., Combarros O., Zelenika D., Bullido M.J., Tavernier B., Letenneur L., Bettens K., Berr C., Pasquier F., Fievet N., Barberger-Gateau P., Engelborghs S., De Deyn P., Mateo I., Franck A., Helisalmi S., Porcellini E., Hanon O., de Pancorbo M.M., Lendon C., Dufouil C., Jaillard C., Leveillard T., Alvarez V., Bosco P., Mancuso M., Panza F., Nacmias B., Bossu P., Piccardi P., Annoni G., Seripa D., Galimberti D., Hannequin D., Licastro F., Soininen H., Ritchie K., Blanche H., Dartigues J.F., Tzourio C., Gut I., Van Broeckhoven C., Alperovitch A., Lathrop M., Amouyel P. Genome-wide association study identifies variants at CLU and CR1 associated with Alzheimer's disease. Nat. Genet. 2009, 41:1094-1099. European Alzheimer's Disease Initiative, I.
12. Mahachie John J.M., Cattaert T., Lishout F.V., Gusareva E.S., Steen K.V. Lower-order effects adjustment in quantitative traits model-based multifactor dimensionality reduction. PLoS One 2012, 7:e29594.
13. McKhann G., Drachman D., Folstein M., Katzman R., Price D., Stadlan E.M. Clinical diagnosis of Alzheimer's disease: report of the NINCDS-ADRDA Work Group under the auspices of Department of Health and Human Services Task Force on Alzheimer's Disease. Neurology 1984, 34:939-944.
14. Miko I. Epistasis: gene interaction and phenotype effects. Nature Education 2008, 1:197.
15. Moore J.H. Aglobal view of epistasis. Nat. Genet. 2005, 37:13-14.
16. Moore J.H., Barney N., Tsai C.T., Chiang F.T., Gui J., White B.C. Symbolic modeling of epistasis. Hum. Hered. 2007, 63:120-133.
17. Phillips P.C. Epistasis-the essential role of gene interactions in the structure and evolution of genetic systems. Nat. Rev. Genet. 2008, 9:855-867.
18. Pierce A., Podlutskaya N., Halloran J.J., Hussong S.A., Lin P.Y., Burbank R., Strong R., Richardson A., Hart M.J., Galvan V. Overexpression of heat shock factor 1 phenocopies the effect of chronic inhibition of TOR by rapamycin and is sufficient to ameliorate Alzheimer's-like deficits in mice modeling the disease. J.Neurochem. 2012, 124:880-893.
19. Sennvik K., Fastbom J., Blomberg M., Wahlund L.O., Winblad B., Benedikz E. Levels of alpha- and beta-secretase cleaved amyloid precursor protein in the cerebrospinal fluid of Alzheimer's disease patients. Neurosci. Lett. 2000, 278:169-172.
20. Templeton A.R. Epistasis and Complex Traits 2000, Oxford University Press, New York.
21. Van Steen K. Travelling the world of gene-gene interactions. Brief. Bioinform. 2012, 13:1-19.
22. Van Steen K., Curran D., Kramer J., Molenberghs G., Van Vreckem A., Bottomley A., Sylvester R. Multicollinearity in prognostic factor analyses using the EORTC QLQ-C30: identification and impact on model selection. Stat. Med. 2002, 21:3865-3884.
23. Wan X., Yang C., Yang Q., Xue H., Fan X., Tang N.L., Yu W. BOOST: a fast approach to detecting gene-gene interactions in genome-wide case-control studies. Am. J. Hum. Genet. 2010, 87:325-340.
24. Watkinson J., Anastassiou D. Synergy disequilibrium plots: graphical visualization of pairwise synergies and redundancies of SNPs with respect to a phenotype. Bioinformatics 2009, 25:1445-1446.
25. Wichmann H.E., Gieger C., Illig T., Group M.K.S. KORA-gen-resource for population genetics, controls and a broad spectrum of disease phenotypes. Gesundheitswesen 2005, 67(suppl 1):S26-S30.
26. Wistow G. The human crystallin gene families. Hum. Genomics 2012, 6:26.
27. Zou F., Chai H.S., Younkin C.S., Allen M., Crook J., Pankratz V.S., Carrasquillo M.M., Rowley C.N., Nair A.A., Middha S., Maharjan S., Nguyen T., Ma L., Malphrus K.G., Palusak R., Lincoln S., Bisceglio G., Georgescu C., Kouri N., Kolbert C.P., Jen J., Haines J.L., Mayeux R., Pericak-Vance M.A., Farrer L.A., Schellenberg G.D., Petersen R.C., Graff-Radford N.R., Dickson D.W., Younkin S.G., Ertekin-Taner N. Brain expression genome-wide association study (eGWAS) identifies human disease-associated variants. PLoS Genet. 2012, 8:e1002707. Alzheimer's Disease Genetics, C.