메뉴 건너뛰기




Volumn 97, Issue 3, 2014, Pages 425-432

Genome-wide DNA methylation profile of leukocytes from melanoma patients with and without CDKN2A mutations

Author keywords

CDKN2A; DNA methylation; Leukocytes; Melanoma; Melanoma epigenetics

Indexed keywords

CYTIDINE; GUANIDINE;

EID: 84922636122     PISSN: 00144800     EISSN: 10960945     Source Type: Journal    
DOI: 10.1016/j.yexmp.2014.09.009     Document Type: Article
Times cited : (3)

References (51)
  • 4
    • 78049402859 scopus 로고    scopus 로고
    • Molecular signals of epigenetic states
    • Bonasio R., Tu S., Reinberg D. Molecular signals of epigenetic states. Science 2010, 330:612-616. 10.1126/science.1191078.
    • (2010) Science , vol.330 , pp. 612-616
    • Bonasio, R.1    Tu, S.2    Reinberg, D.3
  • 6
    • 84885633541 scopus 로고    scopus 로고
    • The neural guidance receptor Plexin C1 delays melanoma progression
    • Chen Y., Soong J., Mohanty S., Xu L., Scott G. The neural guidance receptor Plexin C1 delays melanoma progression. Oncogene 2013, 32:4941-4949. 10.1038/onc.2012.511.
    • (2013) Oncogene , vol.32 , pp. 4941-4949
    • Chen, Y.1    Soong, J.2    Mohanty, S.3    Xu, L.4    Scott, G.5
  • 7
    • 84861740158 scopus 로고    scopus 로고
    • Melanocortin 1 receptor regulates melanoma cell migration by controlling syndecan-2 expression
    • Chung H., Lee J., Jeong D., Han I.-O., Oh E.-S. Melanocortin 1 receptor regulates melanoma cell migration by controlling syndecan-2 expression. J. Biol. Chem. 2012, 287:19326-19335. 10.1074/jbc.M111.334730.
    • (2012) J. Biol. Chem. , vol.287 , pp. 19326-19335
    • Chung, H.1    Lee, J.2    Jeong, D.3    Han, I.-O.4    Oh, E.-S.5
  • 9
    • 77951667623 scopus 로고    scopus 로고
    • MC1R variants increase melanoma risk in families with CDKN2A mutations: a meta-analysis
    • Fargnoli M.C., Gandini S., Peris K., Maisonneuve P., Raimondi S. MC1R variants increase melanoma risk in families with CDKN2A mutations: a meta-analysis. Eur. J. Cancer 2010, 46:1413-1420. 10.1016/j.ejca.2010.01.027.
    • (2010) Eur. J. Cancer , vol.46 , pp. 1413-1420
    • Fargnoli, M.C.1    Gandini, S.2    Peris, K.3    Maisonneuve, P.4    Raimondi, S.5
  • 10
    • 84879410422 scopus 로고    scopus 로고
    • NRAS mutant melanoma: biological behavior and future strategies for therapeutic management
    • Fedorenko I.V., Gibney G.T., Smalley K.S.M. NRAS mutant melanoma: biological behavior and future strategies for therapeutic management. Oncogene 2013, 32:3009-3018. 10.1038/onc.2012.453.
    • (2013) Oncogene , vol.32 , pp. 3009-3018
    • Fedorenko, I.V.1    Gibney, G.T.2    Smalley, K.S.M.3
  • 13
    • 15744401773 scopus 로고    scopus 로고
    • Eukaryotic cytosine methyltransferases
    • Goll M.G., Bestor T.H. Eukaryotic cytosine methyltransferases. Annu. Rev. Biochem. 2005, 74:481-514. 10.1146/annurev.biochem.74.010904.153721.
    • (2005) Annu. Rev. Biochem. , vol.74 , pp. 481-514
    • Goll, M.G.1    Bestor, T.H.2
  • 15
    • 77953664146 scopus 로고    scopus 로고
    • Epimutations and cancer predisposition: importance and mechanisms
    • Hesson L.B., Hitchins M.P., Ward R.L. Epimutations and cancer predisposition: importance and mechanisms. Curr. Opin. Genet. Dev. 2010, 20:290-298. 10.1016/j.gde.2010.02.005.
    • (2010) Curr. Opin. Genet. Dev. , vol.20 , pp. 290-298
    • Hesson, L.B.1    Hitchins, M.P.2    Ward, R.L.3
  • 16
    • 84862909154 scopus 로고    scopus 로고
    • Genome-wide alterations in gene methylation by the BRAF V600E mutation in papillary thyroid cancer cells
    • Hou P., Liu D., Xing M. Genome-wide alterations in gene methylation by the BRAF V600E mutation in papillary thyroid cancer cells. Endocr. Relat. Cancer 2011, 18:687-697. 10.1530/ERC-11-0212.
    • (2011) Endocr. Relat. Cancer , vol.18 , pp. 687-697
    • Hou, P.1    Liu, D.2    Xing, M.3
  • 17
    • 84862907872 scopus 로고    scopus 로고
    • The BRAF(V600E) causes widespread alterations in gene methylation in the genome of melanoma cells
    • Hou P., Liu D., Dong J., Xing M. The BRAF(V600E) causes widespread alterations in gene methylation in the genome of melanoma cells. Cell Cycle. 2012, 11:286-295. 10.4161/cc.11.2.18707.
    • (2012) Cell Cycle. , vol.11 , pp. 286-295
    • Hou, P.1    Liu, D.2    Dong, J.3    Xing, M.4
  • 18
    • 84872055021 scopus 로고    scopus 로고
    • LINE-1 methylation in peripheral blood and the risk of melanoma in melanoma-prone families with and without CDKN2A mutations
    • Hyland P.L., Burke L.S., Pfeiffer R.M., Mirabello L., Tucker M.a, Goldstein A.M., Yang X.R. LINE-1 methylation in peripheral blood and the risk of melanoma in melanoma-prone families with and without CDKN2A mutations. Melanoma Res. 2013, 23:55-60. 10.1097/CMR.0b013e32835adc51.
    • (2013) Melanoma Res. , vol.23 , pp. 55-60
    • Hyland, P.L.1    Burke, L.S.2    Pfeiffer, R.M.3    Mirabello, L.4    Tucker, M.A.5    Goldstein, A.M.6    Yang, X.R.7
  • 20
    • 84893192328 scopus 로고    scopus 로고
    • Accounting for cellular heterogeneity is critical in epigenome-wide association studies
    • Jaffe A.E., Irizarry R.a Accounting for cellular heterogeneity is critical in epigenome-wide association studies. Genome Biol. 2014, 15:R31. 10.1186/gb-2014-15-2-r31.
    • (2014) Genome Biol. , vol.15 , pp. R31
    • Jaffe, A.E.1    Irizarry, R.A.2
  • 22
    • 0035815465 scopus 로고    scopus 로고
    • DFNA5 (ICERE-1) contributes to acquired etoposide resistance in melanoma cells
    • Lage H., Helmbach H., Grottke C., Dietel M., Schadendorf D. DFNA5 (ICERE-1) contributes to acquired etoposide resistance in melanoma cells. FEBS Lett. 2001, 494:54-59.
    • (2001) FEBS Lett. , vol.494 , pp. 54-59
    • Lage, H.1    Helmbach, H.2    Grottke, C.3    Dietel, M.4    Schadendorf, D.5
  • 26
    • 33744507681 scopus 로고    scopus 로고
    • Transient down-regulation of DNMT1 methyltransferase leads to activation and stable hypomethylation of MAGE-A1 in melanoma cells
    • Loriot A., De Plaen E., Boon T., De Smet C. Transient down-regulation of DNMT1 methyltransferase leads to activation and stable hypomethylation of MAGE-A1 in melanoma cells. J. Biol. Chem. 2006, 281:10118-10126. 10.1074/jbc.M510469200.
    • (2006) J. Biol. Chem. , vol.281 , pp. 10118-10126
    • Loriot, A.1    De Plaen, E.2    Boon, T.3    De Smet, C.4
  • 28
    • 79952763964 scopus 로고    scopus 로고
    • DNA methylation array analysis identifies profiles of blood-derived DNA methylation associated with bladder cancer
    • Marsit C.J., Koestler D.C., Christensen B.C., Karagas M.R., Houseman E.A., Kelsey K.T. DNA methylation array analysis identifies profiles of blood-derived DNA methylation associated with bladder cancer. J. Clin. Oncol. 2011, 29:1133-1139. 10.1200/JCO.2010.31.3577.
    • (2011) J. Clin. Oncol. , vol.29 , pp. 1133-1139
    • Marsit, C.J.1    Koestler, D.C.2    Christensen, B.C.3    Karagas, M.R.4    Houseman, E.A.5    Kelsey, K.T.6
  • 31
    • 84874396923 scopus 로고    scopus 로고
    • Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array
    • Price M.E., Cotton A.M., Lam L.L., Farré P., Emberly E., Brown C.J., Robinson W.P., Kobor M.S. Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array. Epigenetics Chromatin 2013, 6:4. 10.1186/1756-8935-6-4.
    • (2013) Epigenetics Chromatin , vol.6 , pp. 4
    • Price, M.E.1    Cotton, A.M.2    Lam, L.L.3    Farré, P.4    Emberly, E.5    Brown, C.J.6    Robinson, W.P.7    Kobor, M.S.8
  • 32
    • 84865069757 scopus 로고    scopus 로고
    • Molecular pathways: dysregulated glutamatergic signaling pathways in cancer
    • Prickett T.D., Samuels Y. Molecular pathways: dysregulated glutamatergic signaling pathways in cancer. Clin. Cancer Res. 2012, 18:4240-4246. 10.1158/1078-0432.CCR-11-1217.
    • (2012) Clin. Cancer Res. , vol.18 , pp. 4240-4246
    • Prickett, T.D.1    Samuels, Y.2
  • 35
    • 33646193822 scopus 로고    scopus 로고
    • Inherited epigenetic variation- revisiting soft inheritance
    • Richards E.J. Inherited epigenetic variation- revisiting soft inheritance. Nat. Rev. Genet. 2006, 7:395-401. 10.1038/nrg1834.
    • (2006) Nat. Rev. Genet. , vol.7 , pp. 395-401
    • Richards, E.J.1
  • 37
    • 63149086077 scopus 로고    scopus 로고
    • Plexin C1, a receptor for semaphorin 7a, inactivates cofilin and is a potential tumor suppressor for melanoma progression
    • Scott G.a, McClelland L.a, Fricke A.F., Fender A. Plexin C1, a receptor for semaphorin 7a, inactivates cofilin and is a potential tumor suppressor for melanoma progression. J. Invest. Dermatol. 2009, 129:954-963. 10.1038/jid.2008.329.
    • (2009) J. Invest. Dermatol. , vol.129 , pp. 954-963
    • Scott, G.A.1    McClelland, L.A.2    Fricke, A.F.3    Fender, A.4
  • 39
    • 77953527600 scopus 로고    scopus 로고
    • Regulation of cellular chromatin state: insights from quiescence and differentiation
    • Srivastava S., Mishra R.K., Dhawan J. Regulation of cellular chromatin state: insights from quiescence and differentiation. Organogenesis 2010, 6:37-47.
    • (2010) Organogenesis , vol.6 , pp. 37-47
    • Srivastava, S.1    Mishra, R.K.2    Dhawan, J.3
  • 40
    • 33750869288 scopus 로고    scopus 로고
    • A ubiquitin ligase, skeletrophin, is a negative regulator of melanoma invasion
    • Takeuchi T., Adachi Y., Sonobe H., Furihata M., Ohtsuki Y. A ubiquitin ligase, skeletrophin, is a negative regulator of melanoma invasion. Oncogene 2006, 25:7059-7069. 10.1038/sj.onc.1209688.
    • (2006) Oncogene , vol.25 , pp. 7059-7069
    • Takeuchi, T.1    Adachi, Y.2    Sonobe, H.3    Furihata, M.4    Ohtsuki, Y.5
  • 41
    • 84856641278 scopus 로고    scopus 로고
    • A unique genome-wide association analysis in extended Utah high-risk pedigrees identifies a novel melanoma risk variant on chromosome arm 10q
    • Teerlink C., Farnham J., Allen-Brady K., Camp N.J., Thomas A., Leachman S., Cannon-Albright L. A unique genome-wide association analysis in extended Utah high-risk pedigrees identifies a novel melanoma risk variant on chromosome arm 10q. Hum. Genet. 2012, 131:77-85. 10.1007/s00439-011-1048-z.
    • (2012) Hum. Genet. , vol.131 , pp. 77-85
    • Teerlink, C.1    Farnham, J.2    Allen-Brady, K.3    Camp, N.J.4    Thomas, A.5    Leachman, S.6    Cannon-Albright, L.7
  • 43
    • 84862266444 scopus 로고    scopus 로고
    • Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation
    • Touleimat N., Tost J. Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation. Epigenomics 2012, 4:325-341. 10.2217/epi.12.21.
    • (2012) Epigenomics , vol.4 , pp. 325-341
    • Touleimat, N.1    Tost, J.2
  • 44
    • 84861845490 scopus 로고    scopus 로고
    • Melanoma: from mutations to medicine
    • Tsao H., Chin L., Garraway L.a, Fisher D.E. Melanoma: from mutations to medicine. Genes Dev. 2012, 26:1131-1155. 10.1101/gad.191999.112.
    • (2012) Genes Dev. , vol.26 , pp. 1131-1155
    • Tsao, H.1    Chin, L.2    Garraway, L.A.3    Fisher, D.E.4
  • 45
    • 78049515404 scopus 로고    scopus 로고
    • Genetic determinants of cutaneous melanoma predisposition
    • Udayakumar D., Mahato B., Gabree M., Tsao H. Genetic determinants of cutaneous melanoma predisposition. Semin. Cutan. Med. Surg. 2010, 29:190-195. 10.1016/j.sder.2010.06.002.
    • (2010) Semin. Cutan. Med. Surg. , vol.29 , pp. 190-195
    • Udayakumar, D.1    Mahato, B.2    Gabree, M.3    Tsao, H.4
  • 46
    • 59949093983 scopus 로고    scopus 로고
    • Absence of germline epimutation of the CDKN2A gene in familial melanoma
    • Van Doorn R., Zoutman W.H., Gruis N.a Absence of germline epimutation of the CDKN2A gene in familial melanoma. J. Invest. Dermatol. 2009, 129:781-784. 10.1038/jid.2008.287.
    • (2009) J. Invest. Dermatol. , vol.129 , pp. 781-784
    • Van Doorn, R.1    Zoutman, W.H.2    Gruis, N.A.3
  • 49
    • 84872679543 scopus 로고    scopus 로고
    • Germline melanoma susceptibility and prognostic genes: a review of the literature
    • Ward K.a, Lazovich D., Hordinsky M.K. Germline melanoma susceptibility and prognostic genes: a review of the literature. J. Am. Acad. Dermatol. 2012, 67:1055-1067. 10.1016/j.jaad.2012.02.042.
    • (2012) J. Am. Acad. Dermatol. , vol.67 , pp. 1055-1067
    • Ward, K.A.1    Lazovich, D.2    Hordinsky, M.K.3
  • 51
    • 84859620860 scopus 로고    scopus 로고
    • Global DNA hypomethylation in peripheral blood leukocytes as a biomarker for cancer risk: a meta-analysis
    • Woo H.D., Kim J. Global DNA hypomethylation in peripheral blood leukocytes as a biomarker for cancer risk: a meta-analysis. PLoS One 2012, 7:e34615. 10.1371/journal.pone.0034615.
    • (2012) PLoS One , vol.7
    • Woo, H.D.1    Kim, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.