-
1
-
-
0032900737
-
CRITICA: coding region identification tool invoking comparative analysis
-
COI: 1:CAS:528:DyaK1MXislShsrc%3D, PID: 10331277
-
Badger JH, Olsen GJ (1999) CRITICA: coding region identification tool invoking comparative analysis. Mol Biol Evol 16:512–524
-
(1999)
Mol Biol Evol
, vol.16
, pp. 512-524
-
-
Badger, J.H.1
Olsen, G.J.2
-
2
-
-
0041419619
-
Direct selection on allozymes is not required to explain heterogeneity among marker loci across a Mytilus hybrid zone
-
COI: 1:CAS:528:DC%2BD3sXnvVSgt7c%3D, PID: 12919488
-
Bierne N, Daguin C, Bonhomme F, David P, Borsa P (2003) Direct selection on allozymes is not required to explain heterogeneity among marker loci across a Mytilus hybrid zone. Mol Ecol 12:2505–2510
-
(2003)
Mol Ecol
, vol.12
, pp. 2505-2510
-
-
Bierne, N.1
Daguin, C.2
Bonhomme, F.3
David, P.4
Borsa, P.5
-
3
-
-
2442713832
-
GeneWise and Genomewise
-
COI: 1:CAS:528:DC%2BD2cXjvFyku7c%3D, PID: 15123596
-
Birney E, Clamp M, Durbin R (2004) GeneWise and Genomewise. Genome Res 14:988–995
-
(2004)
Genome Res
, vol.14
, pp. 988-995
-
-
Birney, E.1
Clamp, M.2
Durbin, R.3
-
4
-
-
0029592773
-
A new DNA sequence assembly program
-
COI: 1:CAS:528:DyaK28XlsVCksg%3D%3D, PID: 8559656
-
Bonfield JK, Smith KF, Staden R (1995) A new DNA sequence assembly program. Nucleic Acids Res 23:4992–4999
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 4992-4999
-
-
Bonfield, J.K.1
Smith, K.F.2
Staden, R.3
-
5
-
-
34250757252
-
An exact nonparametric method for inferring mosaic structure in sequence triplets
-
COI: 1:CAS:528:DC%2BD2sXovVOqsrw%3D, PID: 17409078
-
Boni MF, Posada D, Feldman MW (2007) An exact nonparametric method for inferring mosaic structure in sequence triplets. Genetics 176:1035–1047
-
(2007)
Genetics
, vol.176
, pp. 1035-1047
-
-
Boni, M.F.1
Posada, D.2
Feldman, M.W.3
-
6
-
-
3242790356
-
Complete sequences of the highly rearranged molluscan mitochondrial genomes of the Scaphopod Graptacme eborea and the bivalve Mytilus edulis
-
COI: 1:CAS:528:DC%2BD2cXmtlKgtrY%3D, PID: 15014161
-
Boore JL, Medina M, Rosenberg LA (2004) Complete sequences of the highly rearranged molluscan mitochondrial genomes of the Scaphopod Graptacme eborea and the bivalve Mytilus edulis. Mol Biol Evol 21:1492–1503
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1492-1503
-
-
Boore, J.L.1
Medina, M.2
Rosenberg, L.A.3
-
7
-
-
33644761929
-
Comparative analysis of gender-associated complete mitochondrial genomes in marine mussels (Mytilus spp.)
-
COI: 1:CAS:528:DC%2BD28XivFCkurk%3D, PID: 16322521
-
Breton S, Burger G, Stewart DT, Blier PU (2006) Comparative analysis of gender-associated complete mitochondrial genomes in marine mussels (Mytilus spp.). Genetics 172:1107–1119
-
(2006)
Genetics
, vol.172
, pp. 1107-1119
-
-
Breton, S.1
Burger, G.2
Stewart, D.T.3
Blier, P.U.4
-
8
-
-
67649317027
-
Is interlineage recombination responsible for low divergence of nad3 in Mytilus galloprovincialis?
-
PID: 19387011
-
Burzyński A, Śmietanka B (2009) Is interlineage recombination responsible for low divergence of nad3 in Mytilus galloprovincialis? Mol Biol Evol 26:1441–1445
-
(2009)
Mol Biol Evol
, vol.26
, pp. 1441-1445
-
-
Burzyński, A.1
Śmietanka, B.2
-
9
-
-
0037358964
-
Evidence for recombination of mtDNA in the marine mussel Mytilus trossulus from the Baltic
-
PID: 12644559
-
Burzyński A, Zbawicka M, Skibinski DOF, Wenne R (2003) Evidence for recombination of mtDNA in the marine mussel Mytilus trossulus from the Baltic. Mol Biol Evol 20:388–392
-
(2003)
Mol Biol Evol
, vol.20
, pp. 388-392
-
-
Burzyński, A.1
Zbawicka, M.2
Skibinski, D.O.F.3
Wenne, R.4
-
10
-
-
33751329520
-
Doubly uniparental inheritance is associated with high polymorphism for rearranged and recombinant control region haplotypes in Baltic Mytilus trossulus
-
PID: 16951056
-
Burzyński A, Zbawicka M, Skibinski DOF, Wenne R (2006) Doubly uniparental inheritance is associated with high polymorphism for rearranged and recombinant control region haplotypes in Baltic Mytilus trossulus. Genetics 174:1081–1094
-
(2006)
Genetics
, vol.174
, pp. 1081-1094
-
-
Burzyński, A.1
Zbawicka, M.2
Skibinski, D.O.F.3
Wenne, R.4
-
11
-
-
3142730617
-
Evidence that the large noncoding sequence is the main control region of maternally and paternally transmitted mitochondrial genomes of the marine mussel (Mytilus spp.)
-
COI: 1:CAS:528:DC%2BD2cXms1Kntbo%3D, PID: 15238532
-
Cao L, Kenchington E, Zouros E, Rodakis GC (2004) Evidence that the large noncoding sequence is the main control region of maternally and paternally transmitted mitochondrial genomes of the marine mussel (Mytilus spp.). Genetics 167:835–850
-
(2004)
Genetics
, vol.167
, pp. 835-850
-
-
Cao, L.1
Kenchington, E.2
Zouros, E.3
Rodakis, G.C.4
-
12
-
-
62549111001
-
The control region of maternally and paternally inherited mitochondrial genomes of three species of the sea mussel genus Mytilus
-
COI: 1:CAS:528:DC%2BD1MXksFemtrg%3D, PID: 19139146
-
Cao L, Ort BS, Mizi A, Pogson G, Kenchington E et al (2009) The control region of maternally and paternally inherited mitochondrial genomes of three species of the sea mussel genus Mytilus. Genetics 181:1045–1056
-
(2009)
Genetics
, vol.181
, pp. 1045-1056
-
-
Cao, L.1
Ort, B.S.2
Mizi, A.3
Pogson, G.4
Kenchington, E.5
-
13
-
-
84876331634
-
The mRNAs of maternally and paternally inherited mtDNAs of the mussel Mytilus galloprovincialis: start/end points and polycistronic transcripts
-
COI: 1:CAS:528:DC%2BC3sXksFeju7c%3D, PID: 23473828
-
Chatzoglou E, Kyriakou E, Zouros E, Rodakis GC (2013) The mRNAs of maternally and paternally inherited mtDNAs of the mussel Mytilus galloprovincialis: start/end points and polycistronic transcripts. Gene 520:156–165
-
(2013)
Gene
, vol.520
, pp. 156-165
-
-
Chatzoglou, E.1
Kyriakou, E.2
Zouros, E.3
Rodakis, G.C.4
-
14
-
-
84884526150
-
Mechanism of homologous recombination and implications for aging-related deletions in mitochondrial DNA
-
COI: 1:CAS:528:DC%2BC3sXhslWhs7nM, PID: 24006472
-
Chen XJ (2013) Mechanism of homologous recombination and implications for aging-related deletions in mitochondrial DNA. Microbiol Mol Biol Rev 77:476–496
-
(2013)
Microbiol Mol Biol Rev
, vol.77
, pp. 476-496
-
-
Chen, X.J.1
-
15
-
-
0036667694
-
Ancient sex-specific extension of the cytochrome c oxidase II gene in bivalves and the fidelity of doubly-uniparental inheritance
-
COI: 1:CAS:528:DC%2BD38XmtF2rsrg%3D, PID: 12140244
-
Curole JP, Kocher TD (2002) Ancient sex-specific extension of the cytochrome c oxidase II gene in bivalves and the fidelity of doubly-uniparental inheritance. Mol Biol Evol 19:1323–1328
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1323-1328
-
-
Curole, J.P.1
Kocher, T.D.2
-
16
-
-
0033485517
-
Improved microbial gene identification with GLIMMER
-
COI: 1:CAS:528:DyaK1MXnvVanu7o%3D, PID: 10556321
-
Delcher AL, Harmon D, Kasif S, White O, Salzberg SL (1999) Improved microbial gene identification with GLIMMER. Nucleic Acids Res 27:4636–4641
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 4636-4641
-
-
Delcher, A.L.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.L.5
-
18
-
-
54349087275
-
Recombination in mitochondrial DNA of European mussels Mytilus
-
COI: 1:CAS:528:DC%2BD1cXht1KrtbrP, PID: 18779987
-
Filipowicz M, Burzyński A, Śmietanka B, Wenne R (2008) Recombination in mitochondrial DNA of European mussels Mytilus. J Mol Evol 67:377–388
-
(2008)
J Mol Evol
, vol.67
, pp. 377-388
-
-
Filipowicz, M.1
Burzyński, A.2
Śmietanka, B.3
Wenne, R.4
-
19
-
-
0033753825
-
Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences
-
COI: 1:CAS:528:DC%2BD3cXosFSqs7g%3D, PID: 11038328
-
Gibbs MJ, Armstrong JS, Gibbs AJ (2000) Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences. Bioinformatics 16:573–582
-
(2000)
Bioinformatics
, vol.16
, pp. 573-582
-
-
Gibbs, M.J.1
Armstrong, J.S.2
Gibbs, A.J.3
-
20
-
-
80052448710
-
The complete mitochondrial genome of the hard clam Meretrix meretrix
-
COI: 1:CAS:528:DC%2BC3MXlsVGisLc%3D, PID: 21086173
-
He CB, Wang J, Gao XG, Song WT, Li HJ, Li YF, Liu WD, Su H (2011) The complete mitochondrial genome of the hard clam Meretrix meretrix. Mol Biol Rep 38:3401–3409
-
(2011)
Mol Biol Rep
, vol.38
, pp. 3401-3409
-
-
He, C.B.1
Wang, J.2
Gao, X.G.3
Song, W.T.4
Li, H.J.5
Li, Y.F.6
Liu, W.D.7
Su, H.8
-
21
-
-
0030838078
-
Phylogenetic evidence for role-reversals of gender-associated mitochondrial DNA in Mytilus (Bivalvia: Mytilidae)
-
COI: 1:CAS:528:DyaK2sXlvVeju78%3D, PID: 9287429
-
Hoeh WR, Stewart DT, Saavedra C, Sutherland BW, Zouros E (1997) Phylogenetic evidence for role-reversals of gender-associated mitochondrial DNA in Mytilus (Bivalvia: Mytilidae). Mol Biol Evol 14:959–967
-
(1997)
Mol Biol Evol
, vol.14
, pp. 959-967
-
-
Hoeh, W.R.1
Stewart, D.T.2
Saavedra, C.3
Sutherland, B.W.4
Zouros, E.5
-
22
-
-
33748433801
-
Introgression and mitochondrial DNA heteroplasmy in the Baltic populations of mussels Mytilus trossulus and M. edulis
-
Kijewski TK, Zbawicka M, Väinölä R, Wenne R (2006) Introgression and mitochondrial DNA heteroplasmy in the Baltic populations of mussels Mytilus trossulus and M. edulis. Mar Biol 149:1373–1385
-
(2006)
Mar Biol
, vol.149
, pp. 1373-1385
-
-
Kijewski, T.K.1
Zbawicka, M.2
Väinölä, R.3
Wenne, R.4
-
23
-
-
79951955542
-
Distribution of Mytilus taxa in European coastal areas as inferred from molecular markers
-
Kijewski T, Śmietanka B, Zbawicka M, Gosling E, Hummel H et al (2011) Distribution of Mytilus taxa in European coastal areas as inferred from molecular markers. J Sea Res 65:224–234
-
(2011)
J Sea Res
, vol.65
, pp. 224-234
-
-
Kijewski, T.1
Śmietanka, B.2
Zbawicka, M.3
Gosling, E.4
Hummel, H.5
-
24
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
COI: 1:CAS:528:DyaL3MXmtFSktg%3D%3D, PID: 7463489
-
Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
25
-
-
17744395033
-
Datamonkey: rapid detection of selective pressure on individual sites of codon alignments
-
Kosakovsky Pond SL, Frost SDW (2005a) Datamonkey: rapid detection of selective pressure on individual sites of codon alignments. Bioinformatics 21:2531–2533
-
(2005)
Bioinformatics
, vol.21
, pp. 2531-2533
-
-
Kosakovsky Pond, S.L.1
Frost, S.D.W.2
-
26
-
-
17744396121
-
Not so different after all: a comparison of methods for detecting amino acid sites under selection
-
PID: 15703242
-
Kosakovsky Pond SL, Frost SDW (2005b) Not so different after all: a comparison of methods for detecting amino acid sites under selection. Mol Biol Evol 22:1208–1222
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1208-1222
-
-
Kosakovsky Pond, S.L.1
Frost, S.D.W.2
-
27
-
-
77955855629
-
The atypical presence of the paternal mitochondrial DNA in somatic tissues of male and female individuals of the blue mussel species Mytilus galloprovincialis
-
PID: 20691065
-
Kyriakou E, Zouros E, Rodakis G (2010) The atypical presence of the paternal mitochondrial DNA in somatic tissues of male and female individuals of the blue mussel species Mytilus galloprovincialis. BMC Research Notes 3:222
-
(2010)
BMC Research Notes
, vol.3
, pp. 222
-
-
Kyriakou, E.1
Zouros, E.2
Rodakis, G.3
-
28
-
-
79957452012
-
Homologous recombination between highly diverged mitochondrial sequences: examples from maternally and paternally transmitted genomes
-
COI: 1:CAS:528:DC%2BC3MXmsVOmur0%3D, PID: 21220759
-
Ladoukakis ED, Theologidis I, Rodakis GC, Zouros E (2011) Homologous recombination between highly diverged mitochondrial sequences: examples from maternally and paternally transmitted genomes. Mol Biol Evol 28:1847–1859
-
(2011)
Mol Biol Evol
, vol.28
, pp. 1847-1859
-
-
Ladoukakis, E.D.1
Theologidis, I.2
Rodakis, G.C.3
Zouros, E.4
-
29
-
-
38349180130
-
ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences
-
COI: 1:CAS:528:DC%2BD1cXptlWgtw%3D%3D, PID: 18033792
-
Laslett D, Canbäck B (2008) ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences. Bioinformatics 24:172–175
-
(2008)
Bioinformatics
, vol.24
, pp. 172-175
-
-
Laslett, D.1
Canbäck, B.2
-
30
-
-
0000538640
-
Paternal mitochondrial DNA differentiation far exceeds maternal mitochondrial DNA and allozyme differentiation in the fresh-water mussel, Anodonta grandis grandis
-
COI: 1:CAS:528:DyaK28Xjtleltb0%3D
-
Liu HP, Mitton JB, Wu SK (1996) Paternal mitochondrial DNA differentiation far exceeds maternal mitochondrial DNA and allozyme differentiation in the fresh-water mussel, Anodonta grandis grandis. Evol Int J Org Evol 50:952–957
-
(1996)
Evol Int J Org Evol
, vol.50
, pp. 952-957
-
-
Liu, H.P.1
Mitton, J.B.2
Wu, S.K.3
-
31
-
-
13144283628
-
A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints
-
COI: 1:CAS:528:DC%2BD2MXmtlOntA%3D%3D, PID: 15665649
-
Martin DP, Posada D, Crandall KA, Williamson C (2005a) A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints. AIDS Res Hum Retroviruses 21:98–102
-
(2005)
AIDS Res Hum Retroviruses
, vol.21
, pp. 98-102
-
-
Martin, D.P.1
Posada, D.2
Crandall, K.A.3
Williamson, C.4
-
32
-
-
13444251528
-
RDP2: recombination detection and analysis from sequence alignments
-
COI: 1:CAS:528:DC%2BD2MXkt1Whug%3D%3D, PID: 15377507
-
Martin DP, Williamson C, Posada D (2005b) RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21:260–262
-
(2005)
Bioinformatics
, vol.21
, pp. 260-262
-
-
Martin, D.P.1
Williamson, C.2
Posada, D.3
-
33
-
-
0026708873
-
Analyzing the mosaic structure of genes
-
Maynard Smith J (1992) Analyzing the mosaic structure of genes. J Mol Evol 34:126–129
-
(1992)
J Mol Evol
, vol.34
, pp. 126-129
-
-
Maynard Smith, J.1
-
34
-
-
16344377703
-
The complete maternal and paternal mitochondrial genomes of the Mediterranean mussel Mytilus galloprovincialis: implications for the doubly uniparental inheritance mode of mtDNA
-
COI: 1:CAS:528:DC%2BD2MXjtFaisLo%3D, PID: 15647523
-
Mizi A, Zouros E, Moschonas N, Rodakis GC (2005) The complete maternal and paternal mitochondrial genomes of the Mediterranean mussel Mytilus galloprovincialis: implications for the doubly uniparental inheritance mode of mtDNA. Mol Biol Evol 22:952–967
-
(2005)
Mol Biol Evol
, vol.22
, pp. 952-967
-
-
Mizi, A.1
Zouros, E.2
Moschonas, N.3
Rodakis, G.C.4
-
35
-
-
84864605220
-
Detecting individual sites subject to episodic diversifying selection
-
COI: 1:CAS:528:DC%2BC38XhtVOnsLnI, PID: 22807683
-
Murrell B, Wertheim JO, Moola S, Weighill T, Scheffler K et al (2012) Detecting individual sites subject to episodic diversifying selection. PLoS Genet 8:e1002764
-
(2012)
PLoS Genet
, vol.8
, pp. e1002764
-
-
Murrell, B.1
Wertheim, J.O.2
Moola, S.3
Weighill, T.4
Scheffler, K.5
-
36
-
-
84876522258
-
FUBAR: a fast, unconstrained bayesian approximation for inferring selection
-
COI: 1:CAS:528:DC%2BC3sXlvFWgsLk%3D, PID: 23420840
-
Murrell B, Moola S, Mabona A, Weighill T, Sheward D et al (2013) FUBAR: a fast, unconstrained bayesian approximation for inferring selection. Mol Biol Evol 30:1196–1205
-
(2013)
Mol Biol Evol
, vol.30
, pp. 1196-1205
-
-
Murrell, B.1
Moola, S.2
Mabona, A.3
Weighill, T.4
Sheward, D.5
-
37
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
COI: 1:CAS:528:DyaL28Xmt1aisbs%3D, PID: 3444411
-
Nei M, Gojobori T (1986) Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 3:418–426
-
(1986)
Mol Biol Evol
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
38
-
-
33646010674
-
Sperm mitochondrial DNA transmission to both male and female offspring in the blue mussel Mytilus galloprovincialis
-
COI: 1:CAS:528:DC%2BD28XmslGiu7Y%3D, PID: 16681650
-
Obata M, Kamiya C, Kawamura K, Komaru A (2006) Sperm mitochondrial DNA transmission to both male and female offspring in the blue mussel Mytilus galloprovincialis. Dev Growth Differ 48:253–261
-
(2006)
Dev Growth Differ
, vol.48
, pp. 253-261
-
-
Obata, M.1
Kamiya, C.2
Kawamura, K.3
Komaru, A.4
-
39
-
-
34248342621
-
Inheritance of two M type mitochondrial DNA from sperm and unfertilized eggs to offspring in Mytilus galloprovincialis
-
COI: 1:CAS:528:DC%2BD2sXmvVensbc%3D, PID: 17501909
-
Obata M, Sano N, Kawamura K, Komaru A (2007) Inheritance of two M type mitochondrial DNA from sperm and unfertilized eggs to offspring in Mytilus galloprovincialis. Dev Growth Differ 49:335–344
-
(2007)
Dev Growth Differ
, vol.49
, pp. 335-344
-
-
Obata, M.1
Sano, N.2
Kawamura, K.3
Komaru, A.4
-
40
-
-
0033590220
-
Possible emergence of new geminiviruses by frequent recombination
-
COI: 1:CAS:528:DyaK1MXnvFertbs%3D, PID: 10600594
-
Padidam M, Sawyer S, Fauquet CM (1999) Possible emergence of new geminiviruses by frequent recombination. Virology 265:218–225
-
(1999)
Virology
, vol.265
, pp. 218-225
-
-
Padidam, M.1
Sawyer, S.2
Fauquet, C.M.3
-
41
-
-
0035016876
-
Gender-associated mitochondrial DNA heteroplasmy in the venerid clam Tapes philippinarum (Mollusca Bivalvia)
-
COI: 1:CAS:528:DC%2BD3MXivFais70%3D, PID: 11405096
-
Passamonti M, Scali V (2001) Gender-associated mitochondrial DNA heteroplasmy in the venerid clam Tapes philippinarum (Mollusca Bivalvia). Curr Genet 39:117–124
-
(2001)
Curr Genet
, vol.39
, pp. 117-124
-
-
Passamonti, M.1
Scali, V.2
-
42
-
-
14544275616
-
A genetic algorithm approach to detecting lineage-specific variation in selection pressure
-
COI: 1:CAS:528:DC%2BD2MXhs1Krur8%3D, PID: 15509724
-
Pond SLK, Frost SDW (2005) A genetic algorithm approach to detecting lineage-specific variation in selection pressure. Mol Biol Evol 22:478–485
-
(2005)
Mol Biol Evol
, vol.22
, pp. 478-485
-
-
Pond, S.L.K.1
Frost, S.D.W.2
-
43
-
-
0035923699
-
Evaluation of methods for detecting recombination from DNA sequences: computer simulations
-
COI: 1:CAS:528:DC%2BD3MXovVyntrc%3D, PID: 11717435
-
Posada D, Crandall KA (2001) Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc Natl Acad Sci USA 98:13757–13762
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13757-13762
-
-
Posada, D.1
Crandall, K.A.2
-
44
-
-
0032932614
-
Interspecies transfer of female mitochondrial DNA is coupled with role-reversals and departure from neutrality in the mussel Mytilus trossulus
-
COI: 1:CAS:528:DyaK1MXjtVamu7g%3D, PID: 10335659
-
Quesada H, Wenne R, Skibinski DOF (1999) Interspecies transfer of female mitochondrial DNA is coupled with role-reversals and departure from neutrality in the mussel Mytilus trossulus. Mol Biol Evol 16:655–665
-
(1999)
Mol Biol Evol
, vol.16
, pp. 655-665
-
-
Quesada, H.1
Wenne, R.2
Skibinski, D.O.F.3
-
45
-
-
0347380992
-
Heteroplasmy suggests paternal co-transmission of multiple genomes and pervasive reversion of maternally into paternally transmitted genomes of mussel (Mytilus) mitochondrial DNA
-
COI: 1:CAS:528:DC%2BD2cXjsVeisQ%3D%3D, PID: 15008410
-
Quesada H, Stuckas H, Skibinski DOF (2003) Heteroplasmy suggests paternal co-transmission of multiple genomes and pervasive reversion of maternally into paternally transmitted genomes of mussel (Mytilus) mitochondrial DNA. J Mol Evol 57(Suppl 1):S138–S147
-
(2003)
J Mol Evol
, vol.57
, pp. S138-S147
-
-
Quesada, H.1
Stuckas, H.2
Skibinski, D.O.F.3
-
46
-
-
28244468655
-
Nonhomologous recombination between the large unassigned region of the male and female mitochondrial genomes in the mussel, Mytilus trossulus
-
COI: 1:CAS:528:DC%2BD2MXht1KnsLjL, PID: 16315104
-
Rawson PD (2005) Nonhomologous recombination between the large unassigned region of the male and female mitochondrial genomes in the mussel, Mytilus trossulus. J Mol Evol 61:717–732
-
(2005)
J Mol Evol
, vol.61
, pp. 717-732
-
-
Rawson, P.D.1
-
47
-
-
0031926096
-
Asymmetric introgression of mitochondrial DNA among European population of blue mussels (Mytilus spp.)
-
Rawson PD, Hilbish TJ (1998) Asymmetric introgression of mitochondrial DNA among European population of blue mussels (Mytilus spp.). Evol Int J Org Evol 52:100–108
-
(1998)
Evol Int J Org Evol
, vol.52
, pp. 100-108
-
-
Rawson, P.D.1
Hilbish, T.J.2
-
48
-
-
0036184131
-
Evidence for selection at multiple allozyme loci across a mussel hybrid zone
-
COI: 1:CAS:528:DC%2BD38XitFSnsLc%3D, PID: 11861894
-
Riginos C, Sukhdeo K, Cunningham CW (2002) Evidence for selection at multiple allozyme loci across a mussel hybrid zone. Mol Biol Evol 19:347–351
-
(2002)
Mol Biol Evol
, vol.19
, pp. 347-351
-
-
Riginos, C.1
Sukhdeo, K.2
Cunningham, C.W.3
-
49
-
-
84896726302
-
Co-expressed mitochondrial genomes: recently masculinized, recombinant mitochondrial genome is co-expressed with the female – transmitted mtDNA genome in a male Mytilus trossulus mussel from the Baltic Sea
-
PID: 24575766
-
Sańko T, Burzyński A (2014) Co-expressed mitochondrial genomes: recently masculinized, recombinant mitochondrial genome is co-expressed with the female – transmitted mtDNA genome in a male Mytilus trossulus mussel from the Baltic Sea. BMC Genet 15:28
-
(2014)
BMC Genet
, vol.15
, pp. 28
-
-
Sańko, T.1
Burzyński, A.2
-
50
-
-
33749827106
-
Robust inference of positive selection from recombining coding sequences
-
COI: 1:CAS:528:DC%2BD28XhtVyns73K, PID: 16895925
-
Scheffler K, Martin DP, Seoighe C (2006) Robust inference of positive selection from recombining coding sequences. Bioinformatics 22:2493–2499
-
(2006)
Bioinformatics
, vol.22
, pp. 2493-2499
-
-
Scheffler, K.1
Martin, D.P.2
Seoighe, C.3
-
51
-
-
0242666315
-
Complete mtDNA sequence of the North American freshwater mussel, Lampsilis ornata (Unionidae): an examination of the evolution and phylogenetic utility of mitochondrial genome organization in Bivalvia (Mollusca)
-
COI: 1:CAS:528:DC%2BD3sXpt1Kgtr8%3D, PID: 12949150
-
Serb JM, Lydeard C (2003) Complete mtDNA sequence of the North American freshwater mussel, Lampsilis ornata (Unionidae): an examination of the evolution and phylogenetic utility of mitochondrial genome organization in Bivalvia (Mollusca). Mol Biol Evol 20:1854–1866
-
(2003)
Mol Biol Evol
, vol.20
, pp. 1854-1866
-
-
Serb, J.M.1
Lydeard, C.2
-
52
-
-
0028215969
-
Mitochondrial DNA inheritance
-
COI: 1:STN:280:DyaK2c3htFartQ%3D%3D, PID: 8159240
-
Skibinski DO, Gallagher C, Beynon CM (1994) Mitochondrial DNA inheritance. Nature 368:817–818
-
(1994)
Nature
, vol.368
, pp. 817-818
-
-
Skibinski, D.O.1
Gallagher, C.2
Beynon, C.M.3
-
53
-
-
67349167650
-
Molecular population genetics of male and female mitochondrial genomes in European mussels Mytilus
-
Śmietanka B, Burzyński A, Wenne R (2009) Molecular population genetics of male and female mitochondrial genomes in European mussels Mytilus. Mar Biol 156:913–925
-
(2009)
Mar Biol
, vol.156
, pp. 913-925
-
-
Śmietanka, B.1
Burzyński, A.2
Wenne, R.3
-
54
-
-
78649999609
-
Comparative genomics of marine mussels (Mytilus spp.) gender associated mtDNA: rapidly evolving atp8
-
PID: 20931184
-
Śmietanka B, Burzyński A, Wenne R (2010) Comparative genomics of marine mussels (Mytilus spp.) gender associated mtDNA: rapidly evolving atp8. J Mol Evol 71:385–400
-
(2010)
J Mol Evol
, vol.71
, pp. 385-400
-
-
Śmietanka, B.1
Burzyński, A.2
Wenne, R.3
-
55
-
-
84879197781
-
Molecular population genetics of male and female mitochondrial genomes in subarctic Mytilus trossulus
-
Śmietanka B, Zbawicka M, Sańko T, Wenne R, Burzyński A (2013) Molecular population genetics of male and female mitochondrial genomes in subarctic Mytilus trossulus. Mar Biol 160:1709–1721. doi:10.1007/s00227-013-2223-7
-
(2013)
Mar Biol
, vol.160
, pp. 1709-1721
-
-
Śmietanka, B.1
Zbawicka, M.2
Sańko, T.3
Wenne, R.4
Burzyński, A.5
-
56
-
-
0035237518
-
-
Staden R, Judge DP, Bonfield JK (2001) Sequence assembly and finishing methods. In: Baxevanis AD, Ouellette BFF (eds) Bioinformatics. Wiley, New York
-
Staden R, Judge DP, Bonfield JK (2001) Sequence assembly and finishing methods. In: Baxevanis AD, Ouellette BFF (eds) Bioinformatics. A practical guide to the analysis of genes and proteins. Wiley, New York
-
A practical guide to the analysis of genes and proteins
-
-
-
57
-
-
0029924850
-
Degree of selective constraint as an explanation of the different rates of evolution of gender-specific mitochondrial DNA lineages in the mussel Mytilus
-
COI: 1:CAS:528:DyaK28XksFentL8%3D, PID: 8807306
-
Stewart DT, Kenchington ER, Singh RK, Zouros E (1996) Degree of selective constraint as an explanation of the different rates of evolution of gender-specific mitochondrial DNA lineages in the mussel Mytilus. Genetics 143:1349–1357
-
(1996)
Genetics
, vol.143
, pp. 1349-1357
-
-
Stewart, D.T.1
Kenchington, E.R.2
Singh, R.K.3
Zouros, E.4
-
58
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
COI: 1:CAS:528:DC%2BC3MXht1eiu73K, PID: 21546353
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M et al (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
-
59
-
-
41849125689
-
Doubly uniparental inheritance (DUI) of mitochondrial DNA in Donax trunculus (Bivalvia: Donacidae) and the problem of its sporadic detection in Bivalvia
-
COI: 1:CAS:528:DC%2BD1cXltl2gt74%3D
-
Theologidis I, Fodelianakis S, Gaspar MB, Zouros E (2008) Doubly uniparental inheritance (DUI) of mitochondrial DNA in Donax trunculus (Bivalvia: Donacidae) and the problem of its sporadic detection in Bivalvia. Evol Int J Org Evol 62:959–970
-
(2008)
Evol Int J Org Evol
, vol.62
, pp. 959-970
-
-
Theologidis, I.1
Fodelianakis, S.2
Gaspar, M.B.3
Zouros, E.4
-
60
-
-
36749004267
-
A mitochondrial genome with a reversed transmission route in the Mediterranean mussel Mytilus galloprovincialis
-
COI: 1:CAS:528:DC%2BD2sXhsVSjtr%2FP, PID: 17611047
-
Venetis C, Theologidis I, Zouros E, Rodakis GC (2007) A mitochondrial genome with a reversed transmission route in the Mediterranean mussel Mytilus galloprovincialis. Gene 406:79–90
-
(2007)
Gene
, vol.406
, pp. 79-90
-
-
Venetis, C.1
Theologidis, I.2
Zouros, E.3
Rodakis, G.C.4
-
61
-
-
0029432163
-
Mitochondrial DNA heteroplasmy in European populations of the mussel Mytilus trossulus
-
COI: 1:CAS:528:DyaK2MXnsVektLc%3D
-
Wenne R, Skibinski DOF (1995) Mitochondrial DNA heteroplasmy in European populations of the mussel Mytilus trossulus. Mar Biol 122:619–624
-
(1995)
Mar Biol
, vol.122
, pp. 619-624
-
-
Wenne, R.1
Skibinski, D.O.F.2
-
62
-
-
0028149366
-
Convenient single-step, one tube purification of PCR products for direct sequencing
-
COI: 1:CAS:528:DyaK2MXhvF2itbY%3D, PID: 7937169
-
Werle E, Schneider C, Renner M, Volker M, Fiehn W (1994) Convenient single-step, one tube purification of PCR products for direct sequencing. Nucleic Acids Res 22:4354–4355
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4354-4355
-
-
Werle, E.1
Schneider, C.2
Renner, M.3
Volker, M.4
Fiehn, W.5
-
63
-
-
0038454691
-
Doubly uniparental transmission of mitochondrial DNA length variants in the mussel Mytilus trossulus
-
COI: 1:CAS:528:DC%2BD3sXht1Clsrw%3D
-
Zbawicka M, Skibinski DOF, Wenne R (2003) Doubly uniparental transmission of mitochondrial DNA length variants in the mussel Mytilus trossulus. Mar Biol 142:455–460
-
(2003)
Mar Biol
, vol.142
, pp. 455-460
-
-
Zbawicka, M.1
Skibinski, D.O.F.2
Wenne, R.3
-
64
-
-
36749061848
-
Complete sequences of mitochondrial genomes from the Baltic mussel Mytilus trossulus
-
COI: 1:CAS:528:DC%2BD2sXhsVSjtr7I, PID: 17980515
-
Zbawicka M, Burzyński A, Wenne R (2007) Complete sequences of mitochondrial genomes from the Baltic mussel Mytilus trossulus. Gene 406:191–198
-
(2007)
Gene
, vol.406
, pp. 191-198
-
-
Zbawicka, M.1
Burzyński, A.2
Wenne, R.3
-
65
-
-
77951090325
-
Scottish Mytilus trossulus mussels retain ancestral mitochondrial DNA: complete sequences of male and female mtDNA genomes
-
COI: 1:CAS:528:DC%2BC3cXksFSksLk%3D, PID: 20206245
-
Zbawicka M, Burzyński A, Skibinski D, Wenne R (2010) Scottish Mytilus trossulus mussels retain ancestral mitochondrial DNA: complete sequences of male and female mtDNA genomes. Gene 456:45–53
-
(2010)
Gene
, vol.456
, pp. 45-53
-
-
Zbawicka, M.1
Burzyński, A.2
Skibinski, D.3
Wenne, R.4
-
66
-
-
84901919883
-
New SNP markers reveal largely concordant clinal variation across the hybrid zone between Mytilus spp. in the Baltic Sea
-
Zbawicka M, Sańko T, Wenne R (2014) New SNP markers reveal largely concordant clinal variation across the hybrid zone between Mytilus spp. in the Baltic Sea. Aquat Biol. 21:25–36
-
(2014)
Aquat Biol.
, vol.21
, pp. 25-36
-
-
Zbawicka, M.1
Sańko, T.2
Wenne, R.3
-
67
-
-
0034473868
-
The exceptional mitochondrial DNA system of the mussel family Mytilidae
-
COI: 1:CAS:528:DC%2BD3MXislyntL8%3D, PID: 11280005
-
Zouros E (2000) The exceptional mitochondrial DNA system of the mussel family Mytilidae. Genes Genet Syst 75:313–318
-
(2000)
Genes Genet Syst
, vol.75
, pp. 313-318
-
-
Zouros, E.1
-
68
-
-
0027982521
-
An unusual type of mitochondrial DNA inheritance in the blue mussel Mytilus
-
COI: 1:CAS:528:DyaK2cXlslajt74%3D, PID: 8052604
-
Zouros E, Oberhauser Ball A, Saavedra C, Freeman KR (1994) An unusual type of mitochondrial DNA inheritance in the blue mussel Mytilus. Proc Natl Acad Sci USA 91:7463–7467
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 7463-7467
-
-
Zouros, E.1
Oberhauser Ball, A.2
Saavedra, C.3
Freeman, K.R.4
|