Mycobacterium africanum Is Associated with Patient Ethnicity in Ghana

PLoS Neglected Tropical Diseases

Volumn 9, Issue 1, 2015, Pages

  Asante Poku, Adwoa ^a,b,c   Yeboah Manu, Dorothy ^a   Otchere, Isaac Darko ^a   Aboagye, Samuel Y ^a   Stucki, David ^b,c   Hattendorf, Jan ^b,c   Borrell, Sonia ^b,c   Feldmann, Julia ^b,c   Danso, Emelia ^a   Gagneux, Sebastien ^b,c  

^a University of Ghana   (Ghana)

^b SWISS TROPICAL AND PUBLIC HEALTH INSTITUTE   (Switzerland)

^c UNIVERSITY OF BASEL   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ARTICLE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; BACTERIUM ISOLATION; CHILD; ETHNICITY; FEMALE; GENETIC VARIABILITY; GENOTYPING TECHNIQUE; GEOGRAPHIC DISTRIBUTION; HUMAN; MAJOR CLINICAL STUDY; MALE; MIDDLE AGED; MYCOBACTERIUM AFRICANUM; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; PHYLOGENY; POLYMERASE CHAIN REACTION; PREVALENCE; REAL TIME POLYMERASE CHAIN REACTION; RETROSPECTIVE STUDY; RISK FACTOR; SCHOOL CHILD; SPECIES DIFFERENCE; STRUCTURED QUESTIONNAIRE; TUBERCULOSIS; YOUNG ADULT; ADOLESCENT; CLASSIFICATION; ETHNOLOGY; GENETICS; GENOTYPE; GHANA; MICROBIOLOGY;

ADOLESCENT; ADULT; AGED; CHILD; FEMALE; GENOTYPE; GHANA; HUMANS; MALE; MIDDLE AGED; MYCOBACTERIUM TUBERCULOSIS; PHYLOGENY; TUBERCULOSIS;

EID: 84922262196     PISSN: 19352727     EISSN: 19352735     Source Type: Journal    
DOI: 10.1371/journal.pntd.0003370     Document Type: Article

References (40)

1. World Health Organization (2014) Global Tuberculosis Report, Geneva: World Health Organization.
2. Brosch R, Gordon SV, Marmiesse M, Brodin P, Buchrieser C, et al. (2002) A new evolutionary scenario for the Mycobacterium tuberculosis complex. Proc Natl Acad Sci U S A 99: 3684–3689.
3. Firdessa R, Berg S, Hailu E, Schelling E, Gumi B, et al. (2013) Mycobacterial lineages causing pulmonary and extrapulmonary tuberculosis, Ethiopia. Emerg Infect Dis 19: 460–463.
4. Gagneux S, Small PM, (2007) Global phylogeography of Mycobacterium tuberculosis and implications for tuberculosis product development. Lancet Infect Dis 7: 328–37.
5. de Jong BC, Antonio M, Gagneux S, (2010) Mycobacterium africanum—Review of an important cause of human tuberculosis in West Africa. PLoS Negl Trop Dis 4: e744.
6. Achtman M, (2008) Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens. An Rev Microbiol 62: 53–70.
7. Coscolla M, Gagneux S, (2010) Does M. tuberculosis genomic diversity explain disease diversity? Drug Discov Today Dis Mech 7: e43–e59.
8. Nicol MP, Wilkinson Robert J, (2008) The clinical consequences of strain diversity in Mycobacterium tuberculosis Trans R Soc Trop Med Hyg. 102: 955–965.
9. Comas I, Coscolla M, Luo T, Borrell S, Holt KE, et al. (2013) Out-of-Africa migration and neolithic coexpansion of Mycobacterium tuberculosis with modern humans. Nat Genet 45: 1176–1182.
10. Gagneux S, (2012) Host–pathogen coevolution in human tuberculosis Phil Trans R Soc B. 367: 850–859.
11. Gagneux S, DeRiemer K, Van T, Kato-Maeda M, de Jong BC, et al. (2006) Variable host-pathogen compatibility in Mycobacterium tuberculosis. Proc Natl Acad Sci USA 103: 2869–2873.
12. Fenner L, Egger M, Bodmer T, Furrer H, Ballif M, et al. (2013) HIV infection disrupts the sympatric host–pathogen relationship in human tuberculosis. PLoS Genet 9: e1003318.
13. Yeboah-Manu D, Asante-Poku A, Bodmer T, Stucki D, Koram K, et al. (2011) Genotypic diversity and drug susceptibility patterns among M. tuberculosis complex isolates from South-Western Ghana. PLoS ONE 6: e21906.
14. Government of Ghana (2010) Ghana Demographic and Health Survey, Final Report.
15. Yeboah-Manu D, Bodmer T, Mensah-Quainoo E, Owusu S, Ofori-Adjei D, (2004) Evaluation of decontamination methods and growth media for primary isolation of Mycobacterium ulcerans from surgical specimens. J Clin Microbiol 42: 5875–5876.
16. Yeboah-Manu D, Yates MD, (2001) Stuart Mark (2001) Wilson Application of a simple multiplex polymerase chain reaction to aid in the routine work of the mycobacterium reference laboratory. J Clin Microbiol 39: 4166–4168.
17. Stucki D, Malla B, Hostettler S, Huna T, Feldmann J, et al. (2012) Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages. PLoS ONE 7: e41253.
18. Kamerbeek J, Schouls L, Kolk A, van Agterveld M, van Soolingen D, Kuijper S, et al. (1997) Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J Clin Microbiol 35: 907–14.
19. Demay C, Liens B, Burguiere T, Hill V, Couvin D, et al. (2012) SITVITWEB–a publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology. Infect Genet Evol 12: 755–766.
20. Weniger T, Krawczyk J, Supply P, Niemann S, Harmsen D, (2010) MIRU-VNTRplus: a web tool for polyphasic genotyping of Mycobacterium tuberculosis complex bacteria. Nucleic Acids Res 38: W326–31.
21. Niobe-Eyangoh SN, Kuaban C, Sorlin P, Cunin P, Thonnon J, et al. (2003) Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon. J Clin Microbiol 41: 2547–2553.
22. Lawson L, Zhang J, Gomgnimbou MK, Abdurrahman ST, Le Moullec S, et al. (2012) A molecular epidemiological and genetic diversity study of tuberculosis in Ibadan, Nnewi and Abuja, Nigeria. PLoS ONE 7: e38409.
23. Diguimbaye C, Hilty M, Ngandolo R, Mahamat HH, Pfyffer GE, Baggi F, et al. (2006) Molecular characterization and drug resistance testing of Mycobacterium tuberculosis isolates from Chad. J Clin Microbiol 44: 1575–1577.
24. Wampande EM, Mupere E, Debanne SM, Asiimwe BB, Nsereko M, et al. (2013) Long-term dominance of Mycobacterium tuberculosis Uganda family in peri-urban Kampala-Uganda is not associated with cavitary disease. BMC Infectious Diseases 13: 484.
25. Easterbrook PJ, Gibson A, Murad S, Lamprecht D, Ives N, et al. (2004) High rates of clustering of strains causing tuberculosis in Harare, Zimbabwe: a molecular epidemiological study. J Clin Microbiol 42: 4536–4544.
26. Castets M, Sarrat H, (1969) Experimental study of the virulence of Mycobacterium africanum (preliminary note). Bull Soc Med Afr Noire Lang Fr 14: 693–696.
27. Bold TD, Davis DC, Penberthy KK, Cox LM, Ernst JD, et al. (2012) Impaired fitness of Mycobacterium africanum despite secretion of ESAT-6. J Infect Dis 205: 984–90.
28. de Jong BC, Hill PC, Aiken A, Awine T, Antonio M, et al. (2008) Progression to active tuberculosis, but not transmission, varies by Mycobacterium tuberculosis lineage in the Gambia. J Infect Dis 198: 1037–1043.
29. de Jong BC, Hill PC, Brookes RH, Otu JK, Peterson KL, et al. (2005) Mycobacterium africanum: a new opportunistic pathogen in HIV infection? AIDS 19: 1714–1715.
30. Meyer CG, Scarisbrick G, Niemann S, Browne EN, Chinbuah MA, et al. (2008) Pulmonary tuberculosis: virulence of Mycobacterium africanum and relevance in HIV co-infection. Tuberculosis (Edinb) 88: 482–489.
31. Gehre F, Antonio M, Faïhun F, Odoun M, Uwizeye C, et al. (2013) The First phylogeographic population structure and analysis of transmission dynamics of M. africanum West African 1— combining molecular data from Benin, Nigeria and Sierra Leone. PLoS ONE 8: e77000.
32. Affolabi D, Anyo G, Faihun F, Sanoussi N, Shamputa IC, et al. (2009) First molecular epidemiological study of tuberculosis in Benin. Int J Tuberc Lung Dis 13: 317–322.
33. The Ewe People. en.wikipedia.org/wiki/Ewe_people. Accessed on July 02, 2014.
34. Kofi Anyidoho, (2003) The back without which there is no front. Africa Today 50: 3–18.
35. Pang Y, Song Y, Xia H, Zhou Y, et al. (2012) Risk factors and clinical phenotypes of Beijing genotype strains in tuberculosis patients in China. BMC Infectious Disease 12: 354.
36. Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, et al. (2002) Genetic structure of human populations. Science 298: 2381.
37. Abel L, El-Baghdadi J, Bousfiha AA, Casanova J-L, Schurr E, (2014) Human genetics of tuberculosis: a long and winding road. Phil Trans R Soc B 369: 20130428.
38. Intemann CD, Thye T, Niemann S, Browne ENL, Chinbuah MA, et al. (2009) Autophagy gene variant IRGM2261T contributes to protection from tuberculosis caused by Mycobacterium tuberculosis but not by M. africanum strains. PLoS Pathog 5: e1000577.
39. Herb F, Thye T, Niemann S, Browne ENL, Chinbuah MA, et al. (2008) ALOX5 variants associated with susceptibility to human pulmonary tuberculosis. Hum Mol Genet 17: 1052–60.
40. Thye T, Niemann S, Walter K, Homolka S, Intemann CD, et al. (2011) Variant G57E of Mannose Binding Lectin associated with protection against tuberculosis caused by Mycobacterium africanum but not by M. tuberculosis. PLoS ONE 6: e20908.